BAC Information

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BAC

Clone NameB6Ng01-155E05
Chromosome3 (Build37)
Map Location 5,370,936 - 5,372,079
singlet/doubletsinglet
Overlap geneZfhx4
Upstream geneLOC620283
Downstream genePxmp3, EG620382, EG667759, LOC100041165, LOC100041193, EG620570, LOC100041214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155E05.bB6Ng01-155E05.g
ACCDH950096DH950097
length1,1361,110
definitionDH950096|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E05, 5' end.DH950097|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatacttatgttcatctgtttaagccttatgcatttagaaagga
atatgcatagattttatttgtttttcttgattaccatgaactggtaaaaa
cagtcacttaatttgatcttaaaaagacaatatatggtatcctgagagga
aatattctgatctccatcttaaagatgagaaaaatggatcttcccactga
ttaaaaaaatcattataatatgtaaaatatccttaagtttttgttttaaa
agttcaagctgtgtagtttagaatatcagtacagagtcctgctaataatt
gctgtttccaaaatagtcaacaactaataataacaaggtatggtgggtgg
aacacttcatatatcctgttgattgggtggcagagacaagtagacttctg
tgaatgcaaggctagcctgatctatgtagaagttccagatcagccagttc
tacaaaatgaaactctttctcaaattctcaaatgattgaaaggataatag
tgtcattgtcaagaaaggcttatagcaccaatgtacatgaacaaataaag
tataacaggtagatggaatccaaaaatcacgagcaccaaattcatgtaca
ttgtaaacttgtttgtttgtttattatcttgtgttctgaaagctagatca
aagctacgggaagcccttagggaacacaagcactgttttcccattacttc
actcagtactcctcaacattactttccatttgtaataccttactttagtg
tattttgggaaaccttagtgattaattttcttgtctgacagtttaatcat
gtcaataatatatcccaccgactctctttccccaacccttgctattcact
ttctaccctcaccaatcccctcctccagtccaatctcagttctttgcttt
tggtttgattttgtgaccaatatagtttaaccaggcagtctgtgtagcaa
ctggattggaaatgtgtccattcagcctgcttgctcacatgagcccacag
ctgaaagagtgatttctgtcaatggagttcagaaaatagcaaatagttca
gcgatgaggaaggctccccatctaagtttccctctatcatgtctgactgt
taatggctatattattgtccaatagaaccattgcag
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagtttttttctcgtcccggaattcggcaccaattgttattag
acgcgttctcacgcccggccaggaaagacgcaacaaaccaaaatcttctg
cggcaaaactttattgcttacatctttgggagccaggagggcaagcgccc
agcgcccagccccaaaaacgaaagccccctcaataatgaaaccgaaaccc
cttccctctttaggagagttatatttcctaggacgcatcactccctgatt
ggctgcagcccatggccgagctgacgttcacgggaaaggtagagtacaag
tagtcataaaatacccttggctcatgcgcagattatttgtttaccactta
gaacacaggatgtcagcgccatcttgtgacggcgaatgtgggggcggctc
ccaacatctttttacaacagaggaaaaggaacgcatcatcctgaaggccc
agaagaattcccaggagccaatggcactccaactcagatccaagctgata
tcgagaaggggtttcctctcaggaaaccagcttggtattataatatgggc
acaggtagggaagtctctgggtttatccccagtatctaatggtggacctc
aggacagctgtcaagcaatccacaaatttggctaaggtttatgatgtcag
gcagaaagataatgaaagccttgagtggattatagatgctttctgccgtt
actcacacatagaccctgaggaaacagagaattctagcacagtggcactg
ccttttataaatcagttagcactagttactagaaggaagttacagaagtt
agaagactaggggagaagtcattgaggatttggtggaggttttggagaag
gtgatcatacagggcactaagatgaaaagagattagacaggatagatatt
aacgagagatcagtcacggtcttgttagtcaatgtaactcggaccgaaag
atgaaacactaacttgggacattgtaagtggaaagatctgtagaggcggc
gtacagctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_5370936_5372079
seq2: B6Ng01-155E05.b_48_1183

seq1  GAATTCTATACTTATGTTCATCTGTTTAAGCCTTATGCATTTAGAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACTTATGTTCATCTGTTTAAGCCTTATGCATTTAGAAAGGA  50

seq1  ATATGCATAGATTTTATTTGTTTTTCTTGATTACCATGAACTGGTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATAGATTTTATTTGTTTTTCTTGATTACCATGAACTGGTAAAAA  100

seq1  CAGTCACTTAATTTGATCTTAAAAAGACAATATATGGTATCCTGAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTAATTTGATCTTAAAAAGACAATATATGGTATCCTGAGAGGA  150

seq1  AATATTCTGATCTCCATCTTAAAGATGAGAAAAATGGATCTTCCCACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTGATCTCCATCTTAAAGATGAGAAAAATGGATCTTCCCACTGA  200

seq1  TTAAAAAAATCATTATAATATGTAAAATATCCTTAAGTTTTTGTTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATCATTATAATATGTAAAATATCCTTAAGTTTTTGTTTTAAA  250

seq1  AGTTCAAGCTGTGTAGTTTAGAATATCAGTACAGAGTCCTGCTAATAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGCTGTGTAGTTTAGAATATCAGTACAGAGTCCTGCTAATAATT  300

seq1  GCTGTTTCCAAAATAGTCAACAACTAATAATAACAAGGTATGGTGGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCCAAAATAGTCAACAACTAATAATAACAAGGTATGGTGGGTGG  350

seq1  AACACTTCATATATCCTGTTGATTGGGTGGCAGAGACAAGTAGACTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCATATATCCTGTTGATTGGGTGGCAGAGACAAGTAGACTTCTG  400

seq1  TGAATGCAAGGCTAGCCTGATCTATGTAGAAGTTCCAGATCAGCCAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCAAGGCTAGCCTGATCTATGTAGAAGTTCCAGATCAGCCAGTTC  450

seq1  TACAAAATGAAACTCTTTCTCAAATTCTCAAATGATTGAAAGGATAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATGAAACTCTTTCTCAAATTCTCAAATGATTGAAAGGATAATAG  500

seq1  TGTCATTGTCAAGAAAGGCTTATAGCACCAATGTACATGAACAAATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGTCAAGAAAGGCTTATAGCACCAATGTACATGAACAAATAAAG  550

seq1  TATAACAGGTAGATGGAATCCAAAAATCACGAGCACCAAATTCATGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAGGTAGATGGAATCCAAAAATCACGAGCACCAAATTCATGTACA  600

seq1  TTGTAAACTTGTTTGTTTGTTTATTATCTTGTGTTCTGAAAGCTAGATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACTTGTTTGTTTGTTTATTATCTTGTGTTCTGAAAGCTAGATCA  650

seq1  AAGCTACGGGAAGCCCTTAGGGAACACAAGCACTGTTTTCCCATTACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACGGGAAGCCCTTAGGGAACACAAGCACTGTTTTCCCATTACTTC  700

seq1  ACTCAGTACTCCTCAACATTACTTTCCATTTGTAATACCTTACTTTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTACTCCTCAACATTACTTTCCATTTGTAATACCTTACTTTAGTG  750

seq1  TATTTTGGGAAACCTTAGTGATTAATTTTCTTGTCTGACAGTTTAATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGGAAACCTTAGTGATTAATTTTCTTGTCTGACAGTTTAATCAT  800

seq1  GTCAATAATATATCCCACCGACTCTCTTTCCCCAACCCTTGCTATTCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAATATATCCCACCGACTCTCTTTCCCCAACCCTTGCTATTCACT  850

seq1  TTCTACCCTCACCAATCCCCTCCTCCAGTCCAATCTCAGTTCTTTGCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCCTCACCAATCCCCTCCTCCAGTCCAATCTCAGTTCTTTGCTTT  900

seq1  TGGTTTGATTTTGTGACCAATATAGTTTAACCAGGGCAGTCTGTGTAGCA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGTTTGATTTTGTGACCAATATAGTTTAACCA-GGCAGTCTGTGTAGCA  949

seq1  ACTGGATTGGAAATGTGTCCATTTCAGCCTGGCTTGCTCACCAATGAGCC  1000
      ||||||||||||||||||||| |||||||| ||||||||||  |||||||
seq2  ACTGGATTGGAAATGTGTCCA-TTCAGCCT-GCTTGCTCAC--ATGAGCC  995

seq1  CACAGCTGAAAGAAGTGATTTCTGTCAAT-GAGTTCAG-AAATAGCAAAT  1048
      |||||||||||| |||||||||||||||| |||||||| |||||||||||
seq2  CACAGCTGAAAG-AGTGATTTCTGTCAATGGAGTTCAGAAAATAGCAAAT  1044

seq1  AGTTCAGCGATGAGGGAAGGCTCCCCCATCTAAGTTTCCCCTCTATCCAT  1098
      ||||||||||||| |||||||| |||||||||||||| |||||||| |||
seq2  AGTTCAGCGATGA-GGAAGGCT-CCCCATCTAAGTTT-CCCTCTAT-CAT  1090

seq1  GTCTGACTGTTAATGGC-CTATTATTTGTCACATAGACCCATTGCAG  1144
      |||||||||||||||||  ||||| |||||  ||||| |||||||||
seq2  GTCTGACTGTTAATGGCTATATTA-TTGTCCAATAGAACCATTGCAG  1136