BAC Information

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BAC

Clone NameB6Ng01-155O14
Chromosome3 (Build37)
Map Location 134,242,034 - 134,243,201
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1
Downstream geneLOC100039234, Tacr3, LOC229837, LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba, LOC668745
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155O14.bB6Ng01-155O14.g
ACCDH950556DH950557
length1,0431,144
definitionDH950556|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O14, 5' end.DH950557|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttcctctgtctcacaatattccagctccttcttccccaat
gttcattgaaccttaagtgcaggatttgttttctagatgtattcactgag
acaggggtccacaaaactggatttggattggttctcgtcttctgcaatgc
tctccatctgttgcaaagagatgtttccttgatgtgaggtgaggactgaa
attatccgtggaaataagaacataaatttagaatgtagttaggaattatg
ctggttttgaaaagtgacagttgcagggtctccttgagcattgatgattt
tactctgtctgggtagttgtctaagtttttggtttgactttcatcctgtt
aagctggtcttaagtccagttagagagctgtttgcctaggcatatgtgcc
gctactgcacactcagggttatgatgctgtgctgcctggtgttgtggctc
ctaggcatcatggctgggtaggaccgctggttgctcccctcctttagaag
atgcaaatcataactgataactgtttagacctttctcttctttataaaga
tttaactcctcttccagcccatccatccctaatttacaactacatccctt
gctttaataagaatacagattttgttttcctgaattacttatgtgattaa
atacatgaagaagggtagtgtgatggctattcttggttgtccattttact
acatctggaattaactaaaacccaagtgctgggcacatctgtgagagatt
ttttttttaattaaatcatttgaagtggaaatatccacctttaatctgga
tcttctgagatgcaaaaatccatctttaatatgggccatacatctataaa
agacatggaagaagaaagctagagttaactatttggaaaaggcaagttcc
tagagagcatgtgcagtacttagagcaaaggagatgtagtagttcaagtg
tcaccaacattttctcaaaggacaaatagacagcttgtaaggctcctctc
ctcctctcttactctacctgctctcctctctctcctctccctc
gaattcagattcttgtgtgtgtgcagcaggtaagcacttatggactgtgc
tatttcacaggccccaggaagaggaattgacttctttgtctacggtcttc
acaaagaaaggataggagagaatcatgaatgcatgaaatgagaagggaaa
tattgaatcatcaaatcagatttatttttatggttaaaatatttgaatta
acataaaatttgtacatgtttatggaatactattaggtttaaatatattt
atattatatataattttcaaactatataatatattaatagtaactaatat
taatataattaatataatgtattagtatacattattttatataatattca
aaatacattatatcatatgttcaaactaagataaacataattaccttcta
aaaaattaccatatattgagctcaaaatattcaaaatgctattttattcc
agtttttaaaaaatatacattacattgtttaaagtctaatctttaaatat
tactttactacattttgagcaattaatgaagaatttagaattactctacg
ggttaaaactgtgaattattgaaaagaagaataaagagataaaatcaaat
tagctgaaaaataaattctggtagcatcaaaacaagaaaaatctacttac
tcgcttatatatgccaagcccctgtgtgtttatgtgaatactgaatgggt
gagatttgtagactatgggatgttttgtccaacattctgggtaagagtgc
actcactgacttaacatcttcacagctactgaccacatcacagacagtta
ttgccttctgaaggtacttgtattctgcttcttaagaaatgtttatcctg
catgataatttagagtgtgcattctgcactgtcccatgatcacaaagatt
tgatagggaaaacatatgctaaagtttagacttatgtagatctgtacaat
atatcctgtgtttacatttttacttctttattttgagacaaaatgaatca
tattatggtctttagaaacaatgtatttttctttgtttctcctttagaaa
aagattggttttctttcaatctagcagaatatgggactcactctctaatc
tggaggctgaggagggtgtgtaagctcagtcagctgggctacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134242034_134243201
seq2: B6Ng01-155O14.g_70_1213

seq1  GAATTCAGATTCTTGTGTGTGTGCAGCAGGTAAGCACTTATGGACTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTCTTGTGTGTGTGCAGCAGGTAAGCACTTATGGACTGTGC  50

seq1  TATTTCACAGGCCCCAGGAAGAGGAATTGACTTCTTTGTCTACGGTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACAGGCCCCAGGAAGAGGAATTGACTTCTTTGTCTACGGTCTTC  100

seq1  ACAAAGAAAGGATAGGAGAGAATCATGAATGCATGAAATGAGAAGGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAAGGATAGGAGAGAATCATGAATGCATGAAATGAGAAGGGAAA  150

seq1  TATTGAATCATCAAATCAGATTTATTTTTATGGTTAAAATATTTGAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATCATCAAATCAGATTTATTTTTATGGTTAAAATATTTGAATTA  200

seq1  ACATAAAATTTGTACATGTTTATGGAATACTATTAGGTTTAAATATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATTTGTACATGTTTATGGAATACTATTAGGTTTAAATATATTT  250

seq1  ATATTATATATAATTTTCAAACTATATAATATATTAATAGTAACTAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATATAATTTTCAAACTATATAATATATTAATAGTAACTAATAT  300

seq1  TAATATAATTAATATAATGTATTAGTATACATTATTTTATATAATATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATTAATATAATGTATTAGTATACATTATTTTATATAATATTCA  350

seq1  AAATACATTATATCATATGTTCAAACTAAGATAAACATAATTACCTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTATATCATATGTTCAAACTAAGATAAACATAATTACCTTCTA  400

seq1  AAAAATTACCATATATTGAGCTCAAAATATTCAAAATGCTATTTTATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACCATATATTGAGCTCAAAATATTCAAAATGCTATTTTATTCC  450

seq1  AGTTTTTAAAAAATATACATTACATTGTTTAAAGTCTAATCTTTAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTAAAAAATATACATTACATTGTTTAAAGTCTAATCTTTAAATAT  500

seq1  TACTTTACTACATTTTGAGCAATTAATGAAGAATTTAGAATTACTCTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTACTACATTTTGAGCAATTAATGAAGAATTTAGAATTACTCTACG  550

seq1  GGTTAAAACTGTGAATTATTGAAAAGAAGAATAAAGAGATAAAATCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAACTGTGAATTATTGAAAAGAAGAATAAAGAGATAAAATCAAAT  600

seq1  TAGCTGAAAAATAAATTCTGGTAGCATCAAAACAAGAAAAATCTACTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAAAATAAATTCTGGTAGCATCAAAACAAGAAAAATCTACTTAC  650

seq1  TCGCTTATATATGCCAAGCCCCTGTGTGTTTATGTGAATACTGAATGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTATATATGCCAAGCCCCTGTGTGTTTATGTGAATACTGAATGGGT  700

seq1  GAGATTTGTAGACTATGGGATGTTTTGTCCAACATTCTGGGTAAGAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGTAGACTATGGGATGTTTTGTCCAACATTCTGGGTAAGAGTGC  750

seq1  ACTCACTGACTTAACATCTTCACAGCTACTGACCACATCACAGACAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGACTTAACATCTTCACAGCTACTGACCACATCACAGACAGTTA  800

seq1  TTGCCTTCTGAAGGTACTTGTATTCTGCTTCTTAAGAAATGTTTATCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCTGAAGGTACTTGTATTCTGCTTCTTAAGAAATGTTTATCCTG  850

seq1  CATGATAATTTAGAGTGTGCATTCTGCACTGTCCCATGATCACAAAGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAATTTAGAGTGTGCATTCTGCACTGTCCCATGATCACAAAGATT  900

seq1  TGATAAGGGGAAAACATATGCTAAAGTTTAAGACTTATGTAGATCCTGTA  950
      |||||  |||||||||||||||||||||| |||||||||||||| |||||
seq2  TGATA--GGGAAAACATATGCTAAAGTTT-AGACTTATGTAGAT-CTGTA  946

seq1  CAAATTAATATCCTGTTGTTTACATTTTTACTTCTTTATTTTGAGACACA  1000
      |||    |||||||| |||||||||||||||||||||||||||||||| |
seq2  CAA---TATATCCTG-TGTTTACATTTTTACTTCTTTATTTTGAGACA-A  991

seq1  AATGAATCAATATATGGTCTTTTAGAAAACAAATGTAATGTTTCTTTGTT  1050
      |||||||||   ||||||| ||||||||   ||||| || ||||||||||
seq2  AATGAATCATATTATGGTC-TTTAGAAA--CAATGT-ATTTTTCTTTGTT  1037

seq1  TCT-CTTTAGAAAAAGATTGTTTTTTCTTCAAACCTTAAGCCAGATATGG  1099
      ||| |||||||||||||||| ||||  |||||   |  |||   |||| |
seq2  TCTCCTTTAGAAAAAGATTGGTTTTCTTTCAA---TCTAGCAGAATAT-G  1083

seq1  GGACCCACTTCTCTAATCTTGGGAGGCTGAGGAGGGTTGTTGTAAGCTTC  1149
      |||| ||| ||||||||||  ||||||||||||||||   ||||||| ||
seq2  GGACTCAC-TCTCTAATCT--GGAGGCTGAGGAGGGT--GTGTAAGC-TC  1127

seq1  AGGTCAGCCTGGGCTACAA  1168
      | ||||| |||||||||||
seq2  A-GTCAG-CTGGGCTACAA  1144