BAC Information

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BAC

Clone NameB6Ng01-156J04
Chromosome3 (Build37)
Map Location 91,035,881 - 91,036,558
singlet/doubletsinglet
Overlap genenone
Upstream geneJtb, Creb3l4, LOC100042397, Slc39a1, Crtc2, Dennd4b, Gatad2b, Slc27a3, Ints3, Npr1, LOC668141, Ilf2, Snapap, 2500003M10Rik, S100a1, S100a13, S100a14, S100a16, EG628324, S100a3, S100a4, S100a5, S100a6, S100a7a, S100a8, S100a9, LOC668165, LOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
Downstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156J04.bB6Ng01-156J04.g
ACCDH951042DH951043
length1,168678
definitionDH951042|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J04, 5' end.DH951043|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagttttggagctgagatg
aaaggatggaccatgtagagactgccatatccaggggatccaccccataa
tcagcatccaaacgctgacaccattgcatatactagcaagattttttcga
aaggacccagatgtagctgtctcttgtgaagactatgccggggcctagca
aacacagaagtggatgctcacagtcagctattggatggatcacagggctc
ccattggaggagctagagaaatacccaaggagctaaagggatcttcaact
ctataggtggaacacatatgactaacagacccctgagctcctggactctg
ctgcatatgtatcaaaagtggcctagtcgccatcacttgaagagagacca
ttgaaccccaactttggtgtcctcgtccagtgtaactcagggtccatatg
gttggtagatgtcgtgta
gaattcccaaattggccctcccatgaaagcaacttgcagtgcacttgtag
catacttagtatgaaccagggccatcatcgtttgagataaggataaaggg
tttcatctgtcttacaagtaagagatgatttgttatgcttccttagaagg
tttcttccaaggaaccttttgtttcatattatattgacacatagaattag
ccagtctcaatgaccagtttcattcattttttcatgtgcagtttcagaat
tatataaatacagatataattatatatgtgtatatataatgtatatacat
acatacatacatatagacatatatatgttcacatacacacacatataaat
aaatgtgtagtacaaatatattccatatatatatatatgttgtgcaaata
tattccaaatatcctactttctatatgtagaatgcatatatatttattat
tcatatatagattcttaagtagactgagaactggccgctttctagcaatt
caacagaattccatcatcacattgggattaaaatgatttccagtattgtg
aactgaatagcagccatgccctttgctttctcttgagtaaatatcagtaa
attttgttaatctggaccacagtttgtaatccactctaatggcatttgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91035881_91036558
seq2: B6Ng01-156J04.g_66_743 (reverse)

seq1  CACACACACACACACACACACACACACACACAAATGCCATTAGAGTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACAAATGCCATTAGAGTGGAT  50

seq1  TACAAACTGTGGTCCAGATTAACAAAATTTACTGATATTTACTCAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTGTGGTCCAGATTAACAAAATTTACTGATATTTACTCAAGAGA  100

seq1  AAGCAAAGGGCATGGCTGCTATTCAGTTCACAATACTGGAAATCATTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGGGCATGGCTGCTATTCAGTTCACAATACTGGAAATCATTTTA  150

seq1  ATCCCAATGTGATGATGGAATTCTGTTGAATTGCTAGAAAGCGGCCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAATGTGATGATGGAATTCTGTTGAATTGCTAGAAAGCGGCCAGTT  200

seq1  CTCAGTCTACTTAAGAATCTATATATGAATAATAAATATATATGCATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCTACTTAAGAATCTATATATGAATAATAAATATATATGCATTCT  250

seq1  ACATATAGAAAGTAGGATATTTGGAATATATTTGCACAACATATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGAAAGTAGGATATTTGGAATATATTTGCACAACATATATATAT  300

seq1  ATATGGAATATATTTGTACTACACATTTATTTATATGTGTGTGTATGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAATATATTTGTACTACACATTTATTTATATGTGTGTGTATGTGA  350

seq1  ACATATATATGTCTATATGTATGTATGTATGTATATACATTATATATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATGTCTATATGTATGTATGTATGTATATACATTATATATACA  400

seq1  CATATATAATTATATCTGTATTTATATAATTCTGAAACTGCACATGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAATTATATCTGTATTTATATAATTCTGAAACTGCACATGAAAA  450

seq1  AATGAATGAAACTGGTCATTGAGACTGGCTAATTCTATGTGTCAATATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGAAACTGGTCATTGAGACTGGCTAATTCTATGTGTCAATATAA  500

seq1  TATGAAACAAAAGGTTCCTTGGAAGAAACCTTCTAAGGAAGCATAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAACAAAAGGTTCCTTGGAAGAAACCTTCTAAGGAAGCATAACAAA  550

seq1  TCATCTCTTACTTGTAAGACAGATGAAACCCTTTATCCTTATCTCAAACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTTACTTGTAAGACAGATGAAACCCTTTATCCTTATCTCAAACG  600

seq1  ATGATGGCCCTGGTTCATACTAAGTATGCTACAAGTGCACTGCAAGTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCCCTGGTTCATACTAAGTATGCTACAAGTGCACTGCAAGTTGC  650

seq1  TTTCATGGGAGGGCCAATTTGGGAATTC  678
      ||||||||||||||||||||||||||||
seq2  TTTCATGGGAGGGCCAATTTGGGAATTC  678