BAC Information

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BAC

Clone NameB6Ng01-157O18
Chromosome3 (Build37)
Map Location 14,868,893 - 14,991,171
singlet/doubletdoublet
Overlap geneCar3, Car2, EG634323
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785
Downstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157O18.bB6Ng01-157O18.g
ACCDH952021DH952022
length1,0911,099
definitionDH952021|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O18, 5' end.DH952022|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,868,893 - 14,869,998)(14,990,056 - 14,991,171)
sequence
gaattcactgactgtgagaaaaaaagacagtgggtgtgggtgtggctgtg
gataccaagtgtgctctggcttttactcttttaaagaatgggatgacttt
gcagagggccaaggaacaacatgtaattttgtggttttgcacttcagaga
gctgaaatccaaatttagatcagaaaatatatactctacaatctttcagg
gtaaataaacttatatttggcttaacctgagaatatggaagacataaata
ctgattacatgtggatgggtcaaatcagttttaagaagatcttcaattat
ggcagaggggaaaatatctcatttgatgtcattttcttacagataggacg
ggagaaaggcgagttccagattcttcttgatgccctggacaaaattaaga
cgaaggtaagggtgaaccattttccctctacaaacctaagacaatatcaa
ttgtcactgtctgattgataccctacgttacatacaaaagtaaatttgtt
agtgctgagaccttagagcactgtcacagctgttatttcaattgttagtc
agcctgtcagatcagtactttccctaggaagaaagtggaggtcccagggt
ctgcttgcctctctcctaccacggtgggcacaggattgccgaggctcttc
aggccaggcacagtcactctctcgatcctggtactgtcctttcctggtag
ccccatatattttaaatattaacagtaaactcttgtaactaatagacaca
ttttagttgtctttgatgttgttctagggagctgcttttaggtgtaatac
tagaagtaagtattctaagcatggcatgtactaaagtgaaagtcgtcaca
tcaaacttccaagaagtaattctactccagtctgagtctcctctgggaga
aagggcagactctcagtcccactcatcgtgtaaacaggcataacatattg
ctctgactatgacagataagtttgaacaccaggcagattccttttcatct
gtgatgactagtgagggccgactattcaaatgtctgctttcccttcgcta
tgaatcacttctctgaagaataatgagcctctaggggcgct
gaattcagtaaaatatttaatgaaaattaaaaaggcatgtggaatctctt
gtatatttgctgccttgacagattagaaagtatttgctatgctctgtttt
ctaagaaattacatgccctttatcacttgtataatttttttgttaaaact
ggtgaaaattacagttcttatttctttgcctttgatcttaaagaggcaca
gaaaagtactggattttgactgccaccagaaagtggttggccaattacta
gtcatgaattactgctgtaaggcagatctcatgcaatggaaatctcctct
ccttttttgcaaactgattatcacctacgattaatcaccaacaatgttta
cagctttgtgaactgagagaaagacaatgaacaaacctcaacggacaaat
atcctctggacaatactgtccttgttggaaaccttcaacaccaaacccaa
aaagacaaaagacaaaagaaatctgaactctgaacgccacaatgactggt
cacaaaataacttatgcaaactaaaagaaattagtgcttatacaaaatat
tgaatgaatattaacatacgaaaagagaaaggtagccatctgtgttacag
gtagtggtgtccctccaaaatttctgtaggatttaaacttcaagacctct
gactacagtgttttgggagatgtgcctgttaaagacacccttaaggaaaa
atgagaatgagcgggccctgatccactatgagtggtatctccttgtaaga
aaaagagaattgatcatacatacatacctctgggagactaaggaggccat
aatttggaagccagaaatcatccactctgctgattttgtggtttgggact
tgtagtagccatcacagtgaagattcactcccatttgtcctatatttatt
atacagcctggttaacaaatatagtccttcacacaaaggaattctcctcg
aggatatgctttaatttatttctatttttattttattactcattttggat
ctgagtgtgacagcgtgtcttctgattgcaagcagctagagttcactcat
cccttgtcctcatggaacttcatttatggaagagaaaaatatggagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14868893_14869998
seq2: B6Ng01-157O18.b_45_1135

seq1  GAATTCACTGACTGTGAGAAAAAAAGACAGTGGGTGTGGGTGTGGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGACTGTGAGAAAAAAAGACAGTGGGTGTGGGTGTGGCTGTG  50

seq1  GATACCAAGTGTGCTCTGGCTTTTACTCTTTTAAAGAATGGGATGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAAGTGTGCTCTGGCTTTTACTCTTTTAAAGAATGGGATGACTTT  100

seq1  GCAGAGGGCCAAGGAACAACATGTAATTTTGTGGTTTTGCACTTCAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGGCCAAGGAACAACATGTAATTTTGTGGTTTTGCACTTCAGAGA  150

seq1  GCTGAAATCCAAATTTAGATCAGAAAATATATACTCTACAATCTTTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAATCCAAATTTAGATCAGAAAATATATACTCTACAATCTTTCAGG  200

seq1  GTAAATAAACTTATATTTGGCTTAACCTGAGAATATGGAAGACATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAACTTATATTTGGCTTAACCTGAGAATATGGAAGACATAAATA  250

seq1  CTGATTACATGTGGATGGGTCAAATCAGTTTTAAGAAGATCTTCAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTACATGTGGATGGGTCAAATCAGTTTTAAGAAGATCTTCAATTAT  300

seq1  GGCAGAGGGGAAAATATCTCATTTGATGTCATTTTCTTACAGATAGGACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGGGAAAATATCTCATTTGATGTCATTTTCTTACAGATAGGACG  350

seq1  GGAGAAAGGCGAGTTCCAGATTCTTCTTGATGCCCTGGACAAAATTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGGCGAGTTCCAGATTCTTCTTGATGCCCTGGACAAAATTAAGA  400

seq1  CGAAGGTAAGGGTGAACCATTTTCCCTCTACAAACCTAAGACAATATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGTAAGGGTGAACCATTTTCCCTCTACAAACCTAAGACAATATCAA  450

seq1  TTGTCACTGTCTGATTGATACCCTACGTTACATACAAAAGTAAATTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTGTCTGATTGATACCCTACGTTACATACAAAAGTAAATTTGTT  500

seq1  AGTGCTGAGACCTTAGAGCACTGTCACAGCTGTTATTTCAATTGTTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGAGACCTTAGAGCACTGTCACAGCTGTTATTTCAATTGTTAGTC  550

seq1  AGCCTGTCAGATCAGTACTTTCCCTAGGAAGAAAGTGGAGGTCCCAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCAGATCAGTACTTTCCCTAGGAAGAAAGTGGAGGTCCCAGGGT  600

seq1  CTGCTTGCCTCTCTCCTACCACGGTGGGCACAGGATTGCCGAGGCTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCCTCTCTCCTACCACGGTGGGCACAGGATTGCCGAGGCTCTTC  650

seq1  AGGCCAGGCACAGTCACTCTCTCGATCCTGGTACTGTCCTTTCCTGGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGCACAGTCACTCTCTCGATCCTGGTACTGTCCTTTCCTGGTAG  700

seq1  CCCCATATATTTTAAATATTAACAGTAAACTCTTGTAACTAATAGACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATATTTTAAATATTAACAGTAAACTCTTGTAACTAATAGACACA  750

seq1  TTTTAGTTGTCTTTGATGTTGTTCTAGGGAGCTGCTTTTAGGTGTAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTGTCTTTGATGTTGTTCTAGGGAGCTGCTTTTAGGTGTAATAC  800

seq1  TAGAAGTAAGTATTCTAAGCATGGCATGTACTAAAGTGAAAGTCGTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAAGTATTCTAAGCATGGCATGTACTAAAGTGAAAGTCGTCACA  850

seq1  TCAAACTTCCAAGAAGTAATTCTACTCCAGTCTGAGTCTCCTCTGGGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTCCAAGAAGTAATTCTACTCCAGTCTGAGTCTCCTCTGGGAGA  900

seq1  AAGGGCAGACTCTCAGTCCCACCCATCGTGTAAACAAGGCATAACATATT  950
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  AAGGGCAGACTCTCAGTCCCACTCATCGTGTAAAC-AGGCATAACATATT  949

seq1  GCCCTGACTATGACAGATAAAGTTTGAACACCAAGCAGATTCCTTTTCAT  1000
      || ||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  GCTCTGACTATGACAGAT-AAGTTTGAACACCAGGCAGATTCCTTTTCAT  998

seq1  CTGTGATTGACTAGTGAAGGGCCCGAACCTATTCAAATGTCTGCTTTCCC  1050
      |||||| ||||||||||  || ||||  ||||||||||||||||||||||
seq2  CTGTGA-TGACTAGTGA--GGGCCGA--CTATTCAAATGTCTGCTTTCCC  1043

seq1  TTTCGCTATTGAAATCACTTCTCCTGAAAGAATAGATGAGGCCTCTAGGG  1100
       ||||||||   |||||||||| ||| ||||||| |||| ||||||| ||
seq2  -TTCGCTAT--GAATCACTTCT-CTG-AAGAATA-ATGA-GCCTCTA-GG  1085

seq1  GGCGCT  1106
      ||||||
seq2  GGCGCT  1091

seq1: chr3_14990056_14991171
seq2: B6Ng01-157O18.g_68_1166 (reverse)

seq1  ATGCTCCACTAATTTCTCTCTTCACTAAATGAGTTCCCATGA-GACAAGG  49
      ||||||||   |||| |||||||  |||||||  | |||||| ||||| |
seq2  ATGCTCCA--TATTTTTCTCTTCCATAAATGAAGTTCCATGAGGACAA-G  47

seq1  GGATGAGTGAACTTCTAGCTGCTTTGCAAATCAGAAGACAACCGCTGTCA  99
      |||||||||||| ||||||||| |||| ||||||||||||  ||||||||
seq2  GGATGAGTGAAC-TCTAGCTGC-TTGC-AATCAGAAGACA--CGCTGTCA  92

seq1  CAACCTCAAGATCCAAAAATGAGTAAAATAAAATAAAAAATAGAAATAAA  149
      ||  ||| |||||| |||||||||  |||||||| |||||||||||| ||
seq2  CA--CTC-AGATCC-AAAATGAGT--AATAAAAT-AAAAATAGAAAT-AA  134

seq1  ATTAAAGCATTATCCTCGGGGAGAATTCCTTTGTGTGAAGGGCTATATTT  199
      ||||||||| |||||||| |||||||||||||||||||||| ||||||||
seq2  ATTAAAGCA-TATCCTCGAGGAGAATTCCTTTGTGTGAAGGACTATATTT  183

seq1  GTTAACCAGGCTGTTATAATAAATATAGGACAAATGGGAGTGAATCTTCA  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTAACCAGGCTG-TATAATAAATATAGGACAAATGGGAGTGAATCTTCA  232

seq1  CTGTGATGGCTACTACAAGTCCCAAACCACAAAATCAGCAGAGTGGATGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATGGCTACTACAAGTCCCAAACCACAAAATCAGCAGAGTGGATGA  282

seq1  TTTCTGGCTTCCAAATTATGGCCTCCTTAGTCTCCCAGAGGTATGTATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGCTTCCAAATTATGGCCTCCTTAGTCTCCCAGAGGTATGTATGT  332

seq1  ATGATCAATTCTCTTTTTCTTACAAGGAGATACCACTCATAGTGGATCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAATTCTCTTTTTCTTACAAGGAGATACCACTCATAGTGGATCAG  382

seq1  GGCCCGCTCATTCTCATTTTTCCTTAAGGGTGTCTTTAACAGGCACATCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGCTCATTCTCATTTTTCCTTAAGGGTGTCTTTAACAGGCACATCT  432

seq1  CCCAAAACACTGTAGTCAGAGGTCTTGAAGTTTAAATCCTACAGAAATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACACTGTAGTCAGAGGTCTTGAAGTTTAAATCCTACAGAAATTT  482

seq1  TGGAGGGACACCACTACCTGTAACACAGATGGCTACCTTTCTCTTTTCGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGACACCACTACCTGTAACACAGATGGCTACCTTTCTCTTTTCGT  532

seq1  ATGTTAATATTCATTCAATATTTTGTATAAGCACTAATTTCTTTTAGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATATTCATTCAATATTTTGTATAAGCACTAATTTCTTTTAGTTT  582

seq1  GCATAAGTTATTTTGTGACCAGTCATTGTGGCGTTCAGAGTTCAGATTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGTTATTTTGTGACCAGTCATTGTGGCGTTCAGAGTTCAGATTTC  632

seq1  TTTTGTCTTTTGTCTTTTTGGGTTTGGTGTTGAAGGTTTCCAACAAGGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTTTGTCTTTTTGGGTTTGGTGTTGAAGGTTTCCAACAAGGAC  682

seq1  AGTATTGTCCAGAGGATATTTGTCCGTTGAGGTTTGTTCATTGTCTTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGTCCAGAGGATATTTGTCCGTTGAGGTTTGTTCATTGTCTTTCT  732

seq1  CTCAGTTCACAAAGCTGTAAACATTGTTGGTGATTAATCGTAGGTGATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCACAAAGCTGTAAACATTGTTGGTGATTAATCGTAGGTGATAA  782

seq1  TCAGTTTGCAAAAAAGGAGAGGAGATTTCCATTGCATGAGATCTGCCTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGCAAAAAAGGAGAGGAGATTTCCATTGCATGAGATCTGCCTTA  832

seq1  CAGCAGTAATTCATGACTAGTAATTGGCCAACCACTTTCTGGTGGCAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAATTCATGACTAGTAATTGGCCAACCACTTTCTGGTGGCAGTC  882

seq1  AAAATCCAGTACTTTTCTGTGCCTCTTTAAGATCAAAGGCAAAGAAATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAGTACTTTTCTGTGCCTCTTTAAGATCAAAGGCAAAGAAATAA  932

seq1  GAACTGTAATTTTCACCAGTTTTAACAAAAAAATTATACAAGTGATAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTAATTTTCACCAGTTTTAACAAAAAAATTATACAAGTGATAAAG  982

seq1  GGCATGTAATTTCTTAGAAAACAGAGCATAGCAAATACTTTCTAATCTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTAATTTCTTAGAAAACAGAGCATAGCAAATACTTTCTAATCTGT  1032

seq1  CAAGGCAGCAAATATACAAGAGATTCCACATGCCTTTTTAATTTTCATTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGCAAATATACAAGAGATTCCACATGCCTTTTTAATTTTCATTA  1082

seq1  AATATTTTACTGAATTC  1116
      |||||||||||||||||
seq2  AATATTTTACTGAATTC  1099