BAC Information

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BAC

Clone NameB6Ng01-158L14
Chromosome3 (Build37)
Map Location 110,873,549 - 110,967,844
singlet/doubletdoublet
Overlap geneLOC100043190
Upstream geneNtng1, LOC100043181, LOC100043183, Prmt6
Downstream geneLOC668712, LOC625585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158L14.bB6Ng01-158L14.g
ACCDH952598DH952599
length1,1381,070
definitionDH952598|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L14, 5' end.DH952599|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,966,681 - 110,967,844)(110,873,549 - 110,874,628)
sequence
gaattcttacttttctttgttgtcctacccttcagagaaaagaatgaaat
tgtaagaaaaaaatcatgtctcaggctagaacagctagatcatggacatg
gaaaattgtgagtattctttggctcttgagttcctatcattaccaagtta
ctgcttttcacacatcatctctctcctccagcattttacttcagagaagg
tgaaagcatgaaatcaaacatttcagatatattcatgccacactttacta
ataaatatatctttataaatcatgtctctctgtattttgtgacaacagat
atgagtaaaaaaataagaaaagggactttatatattattttatgtaaagt
agtatgagaatttcagttgtagtcatggaccatggtttcacagtaaaact
gaattaaaagtcaaccagggtgaggagcacaacattaaatatatgtgtgc
tttcctggatgaaaataaacccacaagtacaatatgtgaatttaagtaat
attattaaacccatttttaaacaatagaataaatgtcgtatcttcttttt
ctaaattatacttcagtttgacagctacagcatcaatttttagataataa
aaatttcagtgctaggtaagatgttaagtgcatattgcacaatttaggag
attaaagaaaaatcagtaggaggagacagctcctgaggatactctaaagg
aaatattttcttttcaaggaaatgctatgttaaatccactcatctagtct
tccattaacttcagctggaaaaataaattttctgtaatcatatggataga
actggtttgaagaaatctgtagggttctattctttacgagaaaagtgtac
catgaatgattggaggtcattgaaaaggagctgatccagagtgctgcgtg
acataactggcttgtgaatgtcatggggtattttatggggctgatggatg
aggtcattcttaaagattggcagctgtatatagataagtgagaaactgaa
ggctgaatatgatcagaaagctgtaaacagagagcagtgagaatgcactg
tgcaatagcttatcgagcatgcatattcactgctacacagcactactttc
agaagccaatgtgtagtgtgggtttggctcagatcttg
gaattctgagaagccaatgccagaaaattggttcatttgcctcactgcac
agagtatcagtagacacttgctcatcttgtggctttcaggagtgcacaaa
atagagttcacacgttgtgcatttctctcacacactctgagctcaagtga
ggtcacaagacactaggcacaacaatatcagagagctaggcaagccaggc
ttgcctctggtgtgtgcctctggtggctgctggtgtttatctgatgtgtc
tgagctgggaaggcattaaagcagcagtgctgctgaggtgggtccacata
aaatccttgccataaatgccacagaacattttaattccactgtgcttatg
aaggctgtgttttacctgttataaaaaggttcatattgagccctttaaaa
tgcagctttttttgtggagttcttagctttaggattttgttgagttgatc
acagagttcataaaatgctttctgtttgggacttttgctgtccaatgcta
agtggcaatgtgtgcagattaatttaactgtaatgaaaattagctgtgct
gtttggtttcacattgggactgccatcctggaggtcagtactaatgatat
gtcaggctcttcctgacagtttgcatacagcacggtttactcagagctca
gcatagtcaggagcacaggatgagcaggtattgaactgtcaagtggcaac
accctggtgacagatgatgccatggagatcaccccccccccccccatagc
agagtaaactgcctctgccatctttcctgttccttataaaacaaacaaac
aaacaaacaaacaaacaaactaatttttggtaaaagttacaagtgtgttt
acaggaatcattacgactttagacatttgaaatccatagaaacagaaata
caatgaaagtgctgtgaaattctgagaaacattgaacagctaatgggagg
tgcttgttatgtgatgtaccctgcattgcattcttcttagagtctgcaga
aatgcattgcacaatgtacatttgggtatgaattttattctgtgcggata
ggttcttgtatgctcctaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_110966681_110967844
seq2: B6Ng01-158L14.b_45_1182 (reverse)

seq1  CAAGATCTGTGGCAGAACCCACACTTTACACATTGGCTTTCTTGAAAGTT  50
      ||||||||| | || |||||||||  |||||||||||||   |||||| |
seq2  CAAGATCTGAGCCA-AACCCACAC--TACACATTGGCTT--CTGAAAG-T  44

seq1  AGTGCTGTGTAGCAGGTGAATATGCAATGCCTCGATAAGCTATGTGCACA  100
      |||||||||||||| |||||||||| ||| ||||||||||||| ||||||
seq2  AGTGCTGTGTAGCA-GTGAATATGC-ATG-CTCGATAAGCTAT-TGCACA  90

seq1  AGGTGCATTTCTCACTGCTCTCCCTGTTTTACCAGCCTTTCTGGTTCATA  150
        ||||| |||||||||||||  ||||||   ||| |||||| | |||||
seq2  --GTGCA-TTCTCACTGCTCT--CTGTTT--ACAG-CTTTCT-GATCATA  131

seq1  TTTCAAGCCTTCAGTTTCTCACTTTATCTATATAACAGCTTGCCAATCTT  200
      ||   ||||||||||||||||| |||||||||| ||||| ||||||||||
seq2  TT--CAGCCTTCAGTTTCTCAC-TTATCTATAT-ACAGC-TGCCAATCTT  176

seq1  TAAGAATGACCTCATCCATCAGCCCCATAAAAATACCCCATGACATTCAC  250
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAGAATGACCTCATCCATCAGCCCCAT-AAAATACCCCATGACATTCAC  225

seq1  AAGCCAGTTATGTCACGCAGCACTCTGGGTCAGCTCCTTTTTCAATGACC  300
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  AAGCCAGTTATGTCACGCAGCACTCTGGATCAGCTCC-TTTTCAATGACC  274

seq1  TCCAATCATTCATGGTACACTTTTCTCGTAAAGAATAGAACCCTACAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCATTCATGGTACACTTTTCTCGTAAAGAATAGAACCCTACAGAT  324

seq1  TTCTTCAAACCAGTTCTATCCATATGATTACAGAAAATTTATTTTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAACCAGTTCTATCCATATGATTACAGAAAATTTATTTTTCCAG  374

seq1  CTGAAGTTAATGGAAGACTAGATGAGTGGATTTAACATAGCATTTCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTAATGGAAGACTAGATGAGTGGATTTAACATAGCATTTCCTTG  424

seq1  AAAAGAAAATATTTCCTTTAGAGTATCCTCAGGAGCTGTCTCCTCCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATATTTCCTTTAGAGTATCCTCAGGAGCTGTCTCCTCCTACT  474

seq1  GATTTTTCTTTAATCTCCTAAATTGTGCAATATGCACTTAACATCTTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCTTTAATCTCCTAAATTGTGCAATATGCACTTAACATCTTACC  524

seq1  TAGCACTGAAATTTTTATTATCTAAAAATTGATGCTGTAGCTGTCAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTGAAATTTTTATTATCTAAAAATTGATGCTGTAGCTGTCAAACT  574

seq1  GAAGTATAATTTAGAAAAAGAAGATACGACATTTATTCTATTGTTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATAATTTAGAAAAAGAAGATACGACATTTATTCTATTGTTTAAAA  624

seq1  ATGGGTTTAATAATATTACTTAAATTCACATATTGTACTTGTGGGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTTAATAATATTACTTAAATTCACATATTGTACTTGTGGGTTTAT  674

seq1  TTTCATCCAGGAAAGCACACATATATTTAATGTTGTGCTCCTCACCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCAGGAAAGCACACATATATTTAATGTTGTGCTCCTCACCCTGG  724

seq1  TTGACTTTTAATTCAGTTTTACTGTGAAACCATGGTCCATGACTACAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTAATTCAGTTTTACTGTGAAACCATGGTCCATGACTACAACT  774

seq1  GAAATTCTCATACTACTTTACATAAAATAATATATAAAGTCCCTTTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTCATACTACTTTACATAAAATAATATATAAAGTCCCTTTTCTT  824

seq1  ATTTTTTTACTCATATCTGTTGTCACAAAATACAGAGAGACATGATTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTACTCATATCTGTTGTCACAAAATACAGAGAGACATGATTTAT  874

seq1  AAAGATATATTTATTAGTAAAGTGTGGCATGAATATATCTGAAATGTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATATTTATTAGTAAAGTGTGGCATGAATATATCTGAAATGTTTG  924

seq1  ATTTCATGCTTTCACCTTCTCTGAAGTAAAATGCTGGAGGAGAGAGATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGCTTTCACCTTCTCTGAAGTAAAATGCTGGAGGAGAGAGATGA  974

seq1  TGTGTGAAAAGCAGTAACTTGGTAATGATAGGAACTCAAGAGCCAAAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAAAAGCAGTAACTTGGTAATGATAGGAACTCAAGAGCCAAAGAA  1024

seq1  TACTCACAATTTTCCATGTCCATGATCTAGCTGTTCTAGCCTGAGACATG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACAATTTTCCATGTCCATGATCTAGCTGTTCTAGCCTGAGACATG  1074

seq1  ATTTTTTTCTTACAATTTCATTCTTTTCTCTGAAGGGTAGGACAACAAAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTTACAATTTCATTCTTTTCTCTGAAGGGTAGGACAACAAAG  1124

seq1  AAAAGTAAGAATTC  1164
      ||||||||||||||
seq2  AAAAGTAAGAATTC  1138

seq1: chr3_110873549_110874628
seq2: B6Ng01-158L14.g_69_1138

seq1  GAATTCTGAGAAGCCAATGCCAGAAAATTGGTTCATTTGCCTCACTGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAAGCCAATGCCAGAAAATTGGTTCATTTGCCTCACTGCAC  50

seq1  AGAGTATCAGTAGACACTTGCTCATCTTGTGGCTTTCAGGAGTGCACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATCAGTAGACACTTGCTCATCTTGTGGCTTTCAGGAGTGCACAAA  100

seq1  ATAGAGTTCACACGTTGTGCATTTCTCTCACACACTCTGAGCTCAAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTCACACGTTGTGCATTTCTCTCACACACTCTGAGCTCAAGTGA  150

seq1  GGTCACAAGACACTAGGCACAACAATATCAGAGAGCTAGGCAAGCCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAAGACACTAGGCACAACAATATCAGAGAGCTAGGCAAGCCAGGC  200

seq1  TTGCCTCTGGTGTGTGCCTCTGGTGGCTGCTGGTGTTTATCTGATGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTGGTGTGTGCCTCTGGTGGCTGCTGGTGTTTATCTGATGTGTC  250

seq1  TGAGCTGGGAAGGCATTAAAGCAGCAGTGCTGCTGAGGTGGGTCCACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGGGAAGGCATTAAAGCAGCAGTGCTGCTGAGGTGGGTCCACATA  300

seq1  AAATCCTTGCCATAAATGCCACAGAACATTTTAATTCCACTGTGCTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTGCCATAAATGCCACAGAACATTTTAATTCCACTGTGCTTATG  350

seq1  AAGGCTGTGTTTTACCTGTTATAAAAAGGTTCATATTGAGCCCTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGTGTTTTACCTGTTATAAAAAGGTTCATATTGAGCCCTTTAAAA  400

seq1  TGCAGCTTTTTTTGTGGAGTTCTTAGCTTTAGGATTTTGTTGAGTTGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTTTTTTGTGGAGTTCTTAGCTTTAGGATTTTGTTGAGTTGATC  450

seq1  ACAGAGTTCATAAAATGCTTTCTGTTTGGGACTTTTGCTGTCCAATGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTCATAAAATGCTTTCTGTTTGGGACTTTTGCTGTCCAATGCTA  500

seq1  AGTGGCAATGTGTGCAGATTAATTTAACTGTAATGAAAATTAGCTGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAATGTGTGCAGATTAATTTAACTGTAATGAAAATTAGCTGTGCT  550

seq1  GTTTGGTTTCACATTGGGACTGCCATCCTGGAGGTCAGTACTAATGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTCACATTGGGACTGCCATCCTGGAGGTCAGTACTAATGATAT  600

seq1  GTCAGGCTCTTCCTGACAGTTTGCATACAGCACGGTTTACTCAGAGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTCTTCCTGACAGTTTGCATACAGCACGGTTTACTCAGAGCTCA  650

seq1  GCATAGTCAGGAGCACAGGATGAGCAGGTATTGAACTGTCAAGTGGCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTCAGGAGCACAGGATGAGCAGGTATTGAACTGTCAAGTGGCAAC  700

seq1  ACCCTGGTGACAGATGATGCCATGGAGATCA-CCCCCCCCCCCCCATAGC  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCCTGGTGACAGATGATGCCATGGAGATCACCCCCCCCCCCCCCATAGC  750

seq1  AGAGTAAACTGCCTCTGCCATCTTTCCTGTTCCTTATAAAAACAAACAAA  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAGTAAACTGCCTCTGCCATCTTTCCTGTTCCTTAT-AAAACAAACAAA  799

seq1  CAAACAAACAAACAAACAAACTAATTTTTGGTAAAAGTTACAAGTGTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACAAACTAATTTTTGGTAAAAGTTACAAGTGTGTT  849

seq1  TACAGGAATCATTACGACTTTAGACATTTGAAATCCATAGAAACAGAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAATCATTACGACTTTAGACATTTGAAATCCATAGAAACAGAAAT  899

seq1  ACAATGAAAGTGCTGTGGAATTCTGAGAAACATTGAACAGCTAATGGGAG  949
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAATGAAAGTGCTGTGAAATTCTGAGAAACATTGAACAGCTAATGGGAG  949

seq1  GTGCTTGTTATGTTGATGTACCCTGCAATTGCAATTCTCTTAGAAGGTCT  999
      |||||||||||| ||||||||||||| |||||| |  |||||||  ||||
seq2  GTGCTTGTTATG-TGATGTACCCTGC-ATTGCATTCTTCTTAGA--GTCT  995

seq1  GCAGAAAATGCAATGCACAATGTACATTTGGGTATGAAAATTTTTATTCT  1049
      |||| ||||||| |||||||||||||||||||||||||   |||||||||
seq2  GCAG-AAATGCATTGCACAATGTACATTTGGGTATGAA---TTTTATTCT  1041

seq1  GTGCGGTATAGTTTCTATGTATGCTCATAAA  1080
      |||||| |||| |||| ||||||||| ||||
seq2  GTGCGG-ATAGGTTCT-TGTATGCTCCTAAA  1070