BAC Information

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BAC

Clone NameB6Ng01-159O21
Chromosome3 (Build37)
Map Location 3,496,671 - 3,497,831
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667655, LOC100039140
Downstream geneHnf4g, EG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159O21.bB6Ng01-159O21.g
ACCDH953450DH953451
length1,1681,149
definitionDH953450|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O21, 5' end.DH953451|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactattcagactctgtgacagattgaaaagaaaagagcctgatt
tttgaaggctatccctctatcatctttcataatattaaattcacttttta
ttttccactttaacagctaaagatgttatcactctgagctcacacaaagg
gaatactgagcttggtgatactaataaaaagctacagttgtgacaagagt
taattgcatagttatcacacaattaccaatgtatgttctactgatgttcc
cagagaatggaagagagctaggattctgtgcatcatgtatgacaggagag
gacaatataatgtctataaaatataatatgaataatcctgggtagtgtgt
gacatttgcatgaatgaggtggggtttttgccataaataaagaggaataa
aagtaataaaagctttcttaagtactctagtccctgcttgaaaggagacc
ctataccaatgatcaagtctttagctttaaatttattttatgtctttata
ttgcaaatcccttgacactatattattttattactttgttattttatttt
gagacatataacactggctagctaataagtatttgagcttaattctccca
cctctacctcccatgtgctggctttacaggcaaactttagcatgcactgt
cttggctggtacatttagtatacatttagtaaacttaatttaatattaca
aagtaaaaatatttatattacttctaagcacaagcatcaatttgattttt
aattctctgtagacatatagctgcattctaaaacatatccttatatttac
agataagtgtagctcttatctcttatcaaaaatctttgctttacaacaat
tagagggcattacaaaaaccacaacagataataatgcattgatcaataaa
ttacataagtccatccccaaatgatacatcaacaaccacatactctgtac
ctaacaatcatgaaacatctttggggagaaggtgttaaacagcttctaag
aaaccagtaaaccaggatgtctgcctaaggaaactccggcctattatggc
ttcatatttatggttccctacctaagacctgccattgataatatcagtat
tactacaataaggaatcctttcttgagcctatctctatcacaagaaaatc
aggcaactaaaaactgct
gaattcatatcggggcatggtgaagcaaaatataaagtattgctggaggt
gcggaagatacgggctaaggttggaattggtgctgacccaacactggatt
cacttaggtcaacagcccaactatcgaactaagaactgatcaggcggttg
tccgaagttttcaaaaaagtgctttaggcaagaggaaaaagggtttaagt
taaataatcaggctgatgtctgcagataggagctgtatcgggcagcagaa
acagggtttgtaataataaaataatatagaggataatggattttgaaact
ctcccagaggcagagagaaattttgggggacaccctgtctttttctctct
agcccatacagcagaagttctctaccctctttgtgttgtctaacatctaa
agtctggtgcaacagtctgttcacgtgttcaattcatgtgtgttcttgtc
tagttgtctgaatgactgaatgctctgtgttggaaaataaagatggctaa
aactttatctgctggttcagcaagagaatggcaacatgctttagccagaa
tcaggcacagcaggaaggctcctgctggaaaaacagtttttttgagaaaa
ggagtttgcaacctctcagttcaaggtaagtaggctaggacttggtcctt
cctaagaaaattctctgcaatcttgatttttgcatttagctaatgacaaa
gtacttttaaaaaatatttttattgggtatttttctcatttacatttcca
atgctatcccaaaagtccgccataccctcacccccactacccaacccacc
caatcccctacctacccactcccactttttggccctggcgttaccttgta
ctggggcatataaagtttgcataaccaatgggcctctctttccagtgatg
gccgactagggcatattttgatacattatgcagctagaaacaaaagcctc
tggggtactggctaggtcatatgttggttccatctaaacctttacagaca
actttagctccttgggtacttcctctaccctccccactggggactctgga
tcactcataagctggactggtgagactcaccttcggggtttgctaagccc
acgcatagatctcataggaccgcattacatgggctcttcccgaaaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3496671_3497831
seq2: B6Ng01-159O21.b_45_1212

seq1  GAATTCACTATTCAGACTCTGTGACAGATTGAAAAGAAAAGAGCCTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTCAGACTCTGTGACAGATTGAAAAGAAAAGAGCCTGATT  50

seq1  TTTGAAGGCTATCCCTCTATCATCTTTCATAATATTAAATTCACTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGCTATCCCTCTATCATCTTTCATAATATTAAATTCACTTTTTA  100

seq1  TTTTCCACTTTAACAGCTAAAGATGTTATCACTCTGAGCTCACACAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACTTTAACAGCTAAAGATGTTATCACTCTGAGCTCACACAAAGG  150

seq1  GAATACTGAGCTTGGTGATACTAATAAAAAGCTACAGTTGTGACAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTGAGCTTGGTGATACTAATAAAAAGCTACAGTTGTGACAAGAGT  200

seq1  TAATTGCATAGTTATCACACAATTACCAATGTATGTTCTACTGATGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCATAGTTATCACACAATTACCAATGTATGTTCTACTGATGTTCC  250

seq1  CAGAGAATGGAAGAGAGCTAGGATTCTGTGCATCATGTATGACAGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATGGAAGAGAGCTAGGATTCTGTGCATCATGTATGACAGGAGAG  300

seq1  GACAATATAATGTCTATAAAATATAATATGAATAATCCTGGGTAGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATATAATGTCTATAAAATATAATATGAATAATCCTGGGTAGTGTGT  350

seq1  GACATTTGCATGAATGAGGTGGGGTTTTTGCCATAAATAAAGAGGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGCATGAATGAGGTGGGGTTTTTGCCATAAATAAAGAGGAATAA  400

seq1  AAGTAATAAAAGCTTTCTTAAGTACTCTAGTCCCTGCTTGAAAGGAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATAAAAGCTTTCTTAAGTACTCTAGTCCCTGCTTGAAAGGAGACC  450

seq1  CTATACCAATGATCAAGTCTTTAGCTTTAAATTTATTTTATGTCTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCAATGATCAAGTCTTTAGCTTTAAATTTATTTTATGTCTTTATA  500

seq1  TTGCAAATCCCTTGACACTATATTATTTTATTACTTTGTTATTTTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATCCCTTGACACTATATTATTTTATTACTTTGTTATTTTATTTT  550

seq1  GAGACATATAACACTGGCTAGCTAATAAGTATTTGAGCTTAATTCTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATATAACACTGGCTAGCTAATAAGTATTTGAGCTTAATTCTCCCA  600

seq1  CCTCTACCTCCCATGTGCTGGCTTTACAGGCAAACTTTAGCATGCACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTCCCATGTGCTGGCTTTACAGGCAAACTTTAGCATGCACTGT  650

seq1  CTTGGCTGGTACATTTAGTATACATTTAGTAAACTTAATTTAATATTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGGTACATTTAGTATACATTTAGTAAACTTAATTTAATATTACA  700

seq1  AAGTAAAAATATTTATATTACTTCTAAGCACAAGCATCAATTTGATTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAATATTTATATTACTTCTAAGCACAAGCATCAATTTGATTTTT  750

seq1  AATTCTCTGTAGACATATAGCTGCATTCTAAAACATATCCTTATATTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTGTAGACATATAGCTGCATTCTAAAACATATCCTTATATTTAC  800

seq1  AGATAAGTGTAGCTCTTATCTCTTATCAAAAATCTTTGCTTTACAACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGTGTAGCTCTTATCTCTTATCAAAAATCTTTGCTTTACAACAAT  850

seq1  TAGAGGGCATTACAAAAACCACAACAGATAATAATGCATTGATCAATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGCATTACAAAAACCACAACAGATAATAATGCATTGATCAATAAA  900

seq1  TTACATAAGTCCATCCCCAAATGATACATC-ACAA-CACATACTCTGTAC  948
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  TTACATAAGTCCATCCCCAAATGATACATCAACAACCACATACTCTGTAC  950

seq1  CTAACAATCATGAAACATCTT--GGGAG-AGGTG-TAAACAGCTTCTAAG  994
      |||||||||||||||||||||  ||||| ||||| |||||||||||||||
seq2  CTAACAATCATGAAACATCTTTGGGGAGAAGGTGTTAAACAGCTTCTAAG  1000

seq1  -AACCAGTAAACCAGGATGTCTGCCTAAGGAAACT-CTGCCTATAAT-GC  1041
       |||||||||||||||||||||||||||||||||| | |||||| || ||
seq2  AAACCAGTAAACCAGGATGTCTGCCTAAGGAAACTCCGGCCTATTATGGC  1050

seq1  TTCAATATTATGGCTACCTACATAAGACTTGCAATTGATAATATCAGTAT  1091
      ||||   |||||| | ||||| |||||| ||| |||||||||||||||||
seq2  TTCATATTTATGGTTCCCTACCTAAGACCTGCCATTGATAATATCAGTAT  1100

seq1  TACTACAAAATGAGGAACTCTTACATGAGCTTACCCCTAGACAAAGAAAT  1141
      ||||||  ||| |||||  ||| | ||||| || | |||    |||||| 
seq2  TACTAC--AATAAGGAATCCTTTCTTGAGCCTATCTCTATCACAAGAAAA  1148

seq1  ACAGGCAACTAAAAACTGCT  1161
       |||||||||||||||||||
seq2  TCAGGCAACTAAAAACTGCT  1168