BAC Information

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BAC

Clone NameB6Ng01-166F07
Chromosome3 (Build37)
Map Location 60,081,321 - 60,082,467
singlet/doubletsinglet
Overlap genenone
Upstream geneIgsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1
Downstream geneLOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166F07.bB6Ng01-166F07.g
ACCDH958141DH958142
length1,1511,167
definitionDH958141|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F07, 5' end.DH958142|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttctcctcatagaaaagggtcggcacagtttattgatgtgtg
aatctctgtaacgatttagttgtcatttctccctgaagaacataagctct
ataaaatcacagactgcatctaattgctgaataatcattgttcatatagt
attagcataatataacatggactcaaaatgttttatgaacagctagattc
tatgagtgatgaatactgtaaaagtgcctgcggagtatattgctttctta
aatgaattaaaattaatccataaatctttagtccttgtgatcagtctcta
cattggaatgtataaagatgataagaagggtggtctttttagaagatttg
acataaagaagtttcaatctgaggcacagacatgtattaaaatcaaggca
taaaagaagacaaattaaatttactgattttatcttatcagccatatttg
aaaatcttttcatgtttttgttttattttctttttttaagtactttaaca
ttctcaggaaggaagactatttcctctccagaagcatcagaaaagaagcc
tctcctactgtgaatccccaagctgccggtcttggctttgactgggctag
cagtcagccattgagctaagaatagaaacagagaccattctgtccacatg
gaattcacttctgactcaactctgaatccatattactttagtaataaaaa
gttttcctttttatagagcttttgagagctaagacaccttttttcctgtt
tcaggtcattcagtagtgcattaaagataaatttgaaaaatacattgtgt
aggtgcagtaagcatgatgtggttttctgagcctcatctaaattaaaggc
agtttaggcttgaggtaaatgcataactataattcctgtcatacagaaat
gactttatttaaaaacctgtgcagtcacaatcattgcagttgagatatgc
atgtctgtgtactgacgatgtcgctctagtgtgtgcaaggctccaggtgt
catcttcagctctacaaataagaacagcctgaaggaaaaaataaacaaat
gtggtggatttatttttctagataaagaagaaactactctgacccctcaa
ttttaggaaagatgtttattggtggggcttaaattgctgctataattttt
c
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagacggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgaggagctagagaaagtagccaaggagctaaagggatctgcaacccta
taggtggaacaacattatgagctaaccagtaccccggagctcttgactct
agctgcatatataatcaaagatgcctagtcgccatccactggaaaagagg
tcattggacctgcaactttatatgcctcagtacaggcatttcaaggtcaa
aaggggatgtgctgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60081321_60082467
seq2: B6Ng01-166F07.b_46_1196

seq1  GAATTCTCTTCTCCTCATAGAAAAGGGTCGGCACAGTTTATTGATGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTCCTCATAGAAAAGGGTCGGCACAGTTTATTGATGTGTG  50

seq1  AATCTCTGTAACGATTTAGTTGTCATTTCTCCCTGAAGAACATAAGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGTAACGATTTAGTTGTCATTTCTCCCTGAAGAACATAAGCTCT  100

seq1  ATAAAATCACAGACTGCATCTAATTGCTGAATAATCATTGTTCATATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCACAGACTGCATCTAATTGCTGAATAATCATTGTTCATATAGT  150

seq1  ATTAGCATAATATAACATGGACTCAAAATGTTTTATGAACAGCTAGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATAATATAACATGGACTCAAAATGTTTTATGAACAGCTAGATTC  200

seq1  TATGAGTGATGAATACTGTAAAAGTGCCTGCGGAGTATATTGCTTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGATGAATACTGTAAAAGTGCCTGCGGAGTATATTGCTTTCTTA  250

seq1  AATGAATTAAAATTAATCCATAAATCTTTAGTCCTTGTGATCAGTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTAAAATTAATCCATAAATCTTTAGTCCTTGTGATCAGTCTCTA  300

seq1  CATTGGAATGTATAAAGATGATAAGAAGGGTGGTCTTTTTAGAAGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAATGTATAAAGATGATAAGAAGGGTGGTCTTTTTAGAAGATTTG  350

seq1  ACATAAAGAAGTTTCAATCTGAGGCACAGACATGTATTAAAATCAAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGAAGTTTCAATCTGAGGCACAGACATGTATTAAAATCAAGGCA  400

seq1  TAAAAGAAGACAAATTAAATTTACTGATTTTATCTTATCAGCCATATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAGACAAATTAAATTTACTGATTTTATCTTATCAGCCATATTTG  450

seq1  AAAATCTTTTCATGTTTTTGTTTTATTTTCTTTTTTTAAGTACTTTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTTTCATGTTTTTGTTTTATTTTCTTTTTTTAAGTACTTTAACA  500

seq1  TTCTCAGGAAGGAAGACTATTTCCTCTCCAGAAGCATCAGAAAAGAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGAAGGAAGACTATTTCCTCTCCAGAAGCATCAGAAAAGAAGCC  550

seq1  TCTCCTACTGTGAATCCCCAAGCTGCCGGTCTTGGCTTTGACTGGGCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACTGTGAATCCCCAAGCTGCCGGTCTTGGCTTTGACTGGGCTAG  600

seq1  CAGTCAGCCATTGAGCTAAGAATAGAAACAGAGACCATTCTGTCCACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCCATTGAGCTAAGAATAGAAACAGAGACCATTCTGTCCACATG  650

seq1  GAATTCACTTCTGACTCAACTCTGAATCCATATTACTTTAGTAATAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTGACTCAACTCTGAATCCATATTACTTTAGTAATAAAAA  700

seq1  GTTTTCCTTTTTATAGAGCTTTTGAGAGCTAAGACACCTTTTTTCCTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTTTTTATAGAGCTTTTGAGAGCTAAGACACCTTTTTTCCTGTT  750

seq1  TCAGGTCATTCAGTAGTGCATTAAAGATAAATTTGAAAAATACATTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCATTCAGTAGTGCATTAAAGATAAATTTGAAAAATACATTGTGT  800

seq1  AGGTGCAGTAAGCATGATGTGGTTTTCTGAGCCTCATCTAAATTAAAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCAGTAAGCATGATGTGGTTTTCTGAGCCTCATCTAAATTAAAGGC  850

seq1  AGTTTAGGCTTGAGGTAAATGCATAACTATAATTCCTGTCATACAGAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGCTTGAGGTAAATGCATAACTATAATTCCTGTCATACAGAAAT  900

seq1  GACTTTATTTAAAAACCTGTGCAGTCACAATCATTGCAGTTGAGATATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATTTAAAAACCTGTGCAGTCACAATCATTGCAGTTGAGATATGC  950

seq1  ATGTCTGTGTACTGACGATGTCGCTCTAGTGTGTGCAAGGCTCCAGGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTGTACTGACGATGTCGCTCTAGTGTGTGCAAGGCTCCAGGTGT  1000

seq1  CATCTTCAGCTCTACAAATAAAGAACAGCCTGAAGGAAAAAATAAACAAA  1050
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATCTTCAGCTCTACAAAT-AAGAACAGCCTGAAGGAAAAAATAAACAAA  1049

seq1  TTGTGTGGATTTA-TTTTCTAGATAAAG-AGAAACTACTCTGACACCTCA  1098
      |   ||||||||| |||||||||||||| ||||||||||||||| |||||
seq2  TGTGGTGGATTTATTTTTCTAGATAAAGAAGAAACTACTCTGACCCCTCA  1099

seq1  ATTTTA-GAAAGATGTTAATAG--TGGGCTAATATTGCTGCTATAATTTT  1145
      |||||| |||||||||| || |   ||||| | |||||||||||||||||
seq2  ATTTTAGGAAAGATGTTTATTGGTGGGGCTTAAATTGCTGCTATAATTTT  1149

seq1  TC  1147
      ||
seq2  TC  1151