BAC Information

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BAC

Clone NameB6Ng01-168D06
Chromosome3 (Build37)
Map Location 41,059,410 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168D06.b
ACCDH959503
length791
definitionDH959503|Mus musculus domesticus DNA, BAC clone: B6Ng01-168D06, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatttcttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtcct
ctatctgatttgggataggtaaatatcctttccgaatctgttagtggcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaattttg
tgaggtcccatttatcgatttttgatcttagagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcaaggcttttttctac
tttctcctctataagtttcagtgtctctggagtccagacagaataccagg
agcttacaatggccacacacctctctgcagggggttgagggggactagct
gtgacaggagccaggggcacaggaggcatggctgaacactttccatccct
tatggtcaccggggttccaggactgtgctcaactggggaccaggctgtct
atgcacagctcactgccccacaattccctctttttactttttttaaagag
aggggtcactggagtgattgtgtcatttgtaggaaaaactctgggtgggg
aggcagtatcaaaagaaaacactgtataggcctgaggggtaacacaacta
agccagagtgataaggtaggttaagggtgagggttgggaaggcaagggat
cattgaatcaattaatcgttccatggggagtagagtttgaggtttaaaac
agcatttgattattctagatagatatcaagttttcctatac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059410_41059737
seq2: B6Ng01-168D06.b_46_374 (reverse)

seq1  CCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGA  50
      |||||||||||||||||||||||||||||||| |  ||||||||||||||
seq2  CCAGAGACACTGAAACTTATAGAGGAGAAAGTAGAAAAAAGCCTTGAAGA  50

seq1  TATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTG  100
      |||||  |||||||||||||||||| ||||||||||||||||||||||| 
seq2  TATGGGTACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTC  100

seq1  TAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGC  150
      ||||||  | ||| || |||||||||||||  ||| ||||||||||||||
seq2  TAAGATCAAAAATCGATAAATGGGACCTCACAAAATTGCAAAGCTTCTGC  150

seq1  AAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGA  199
      ||||||||||||||||||||||||||||||||| ||| |||||||| |||
seq2  AAGGCAAAAGACACCGTCAATAAGACAAAAAGGCCACTAACAGATTCGGA  200

seq1  AAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAATATAT  249
      |||||| ||||||||||| ||||||||||| |||||||||||||||||||
seq2  AAGGATATTTACCTATCCCAAATCAGATAGAGGACTAATATCCAATATAT  250

seq1  ATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAA  299
      || ||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  ATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAG  300

seq1  AAATGGGGCTCAGAGCTAAACAAAGAATT  328
      ||||||||||||||||| |||||||||||
seq2  AAATGGGGCTCAGAGCTGAACAAAGAATT  329