BAC Information

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BAC

Clone NameB6Ng01-169E17
Chromosome3 (Build37)
Map Location 77,554,541 - 77,555,065
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169E17.bB6Ng01-169E17.g
ACCDH960311DH960312
length1,212987
definitionDH960311|Mus musculus domesticus DNA, BAC clone: B6Ng01-169E17, 5' end.DH960312|Mus musculus domesticus DNA, BAC clone: B6Ng01-169E17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatctgaggaataccaaatggcttagaagcacataaaaaaatg
ttcaacatccttaaccgttagggaaatgcaaatcaaaacaaccctgagat
tccatcttacaccagtcagaatgtcaaaggtcaaaaatttaggtgacaac
acatgctggcaagcatgtagagaaagaggaacactcctcattgctggtgg
gattgcaagctggtacaacctctctggaaatcagtttggtgattcctcag
aaaactggacatagtactaccagaatatctagcaataccactcctgggca
aatatccagaagatgctccaacatataaaatggacacatgctccggaatg
ttcatagaagtcttatttataatagcatgatgctgaaaagaacccacatg
tcactcaacagaggaatggatacaataaatgtggtacatttacacaatgg
agtactactcagctattaaaaacaatgaatttatgaaacccttagataaa
tggatgtacctggaggatagaatcctgagtgaggtaacccaatcacaaaa
gaacatacatggtatgccctcacttataattggatattagcccagaaact
cagaatacctaagatactatttgcaaaacacatgaaactaaaaaagaaga
ccaaagtgtggatacctcaagtctttcttagaagcccgaacaaaatacct
atagaaggagttacaaagacaaagtttggagcagagacttaaggaatgac
catccagaagctgccccacctggggatccatcccacaaacaaacactaaa
cccagacactattgcagatgtcaataagagcttgctgacaggagcctgat
acagctgtctcctgtgaagttctgccagtgcctgccgaatacagaggtgg
atgctcacagtcatccattggacggagcacagggtccccaatgaaggagc
tagagaaagtactcaaggagctgaaggagtttgcagcctataggagaaac
aacaatatgagctaaccagtaacccagagctcctgggactgaccactatt
aagaaaaacatggtagacttctttctttagctgcaatctagccaaggaat
gcctagtttggcatcatgggagtagagccttgtctggagattctatgcct
cagtatagaaatgccagggcagaagcagatttggtggtgtgggaaacaag
gggggggtgaat
gaattcctctgtttacctggtcagaatccagcctgagctcggctagactg
ttgtttaggacattgtcagcagtgctatcattctggggatctgctttgga
cataagaacttcacaaagtgccaatcccaaccttggcatttatcagacat
caaaggccactcttgatactactaaggcacaagaaagccttggatcactt
gctcaaatgagtcttccaatgattactgggttttaaaattttgctttgtt
attttgtttttgagggaaaaaaaaactatcttatatagcttagtatagtt
tcaaattctggatgtataaaagcctataacctttatttagtgatcctatc
tctaccaaccagtgtcaaaatgaaaggcatgcatcattgtatttgaattt
ttgttatactctttctttgctttaattaattcattttacatcctgaccac
actttccccctctctcctcctctcccatgcctctgcccttgtctcccttc
cctcaccatctactcctcctctgtttctcagcaaaggagaggcctcccat
ggacatccaccagctgtggcaagtcaagttacagtgaggctaggtgcaac
ttctccttctgaagctacgagacacagcccagtaaaggaaaagacacaaa
acagaatcaaagacagcccacactcccactgataagaatctcatatgaaa
attaagttgtacaacaataacatatatgcagagagcttaggtgagctcta
tcataccaggttagttgatttctctaggtttccttgtgatgttcttgacc
ctgtggcgcccacaaattccccacgcctttttttgtaggactccccaaac
tctgcctaatgtgtgtctgtgggtctatgtatttgtttccatcagtttct
ggatgaaacctctctgatgacagttatgcagagatcctctctgtaactat
agcagatatcattaacataatattattgttatggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77554541_77555065
seq2: B6Ng01-169E17.g_68_592 (reverse)

seq1  AACAGAGGAGGAGTAGATGGTGAGGGAAGGGAGACAAGGGCAGAGGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGAGGAGTAGATGGTGAGGGAAGGGAGACAAGGGCAGAGGCATG  50

seq1  GGAGAGGAGGAGAGAGGGGGAAAGTGTGGTCAGGATGTAAAATGAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAGGAGAGAGGGGGAAAGTGTGGTCAGGATGTAAAATGAATTAA  100

seq1  TTAAAGCAAAGAAAGAGTATAACAAAAATTCAAATACAATGATGCATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAAAGAAAGAGTATAACAAAAATTCAAATACAATGATGCATGCC  150

seq1  TTTCATTTTGACACTGGTTGGTAGAGATAGGATCACTAAATAAAGGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTGACACTGGTTGGTAGAGATAGGATCACTAAATAAAGGTTAT  200

seq1  AGGCTTTTATACATCCAGAATTTGAAACTATACTAAGCTATATAAGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTATACATCCAGAATTTGAAACTATACTAAGCTATATAAGATAG  250

seq1  TTTTTTTTTCCCTCAAAAACAAAATAACAAAGCAAAATTTTAAAACCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCCTCAAAAACAAAATAACAAAGCAAAATTTTAAAACCCAG  300

seq1  TAATCATTGGAAGACTCATTTGAGCAAGTGATCCAAGGCTTTCTTGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATTGGAAGACTCATTTGAGCAAGTGATCCAAGGCTTTCTTGTGCC  350

seq1  TTAGTAGTATCAAGAGTGGCCTTTGATGTCTGATAAATGCCAAGGTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGTATCAAGAGTGGCCTTTGATGTCTGATAAATGCCAAGGTTGGG  400

seq1  ATTGGCACTTTGTGAAGTTCTTATGTCCAAAGCAGATCCCCAGAATGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCACTTTGTGAAGTTCTTATGTCCAAAGCAGATCCCCAGAATGATA  450

seq1  GCACTGCTGACAATGTCCTAAACAACAGTCTAGCCGAGCTCAGGCTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCTGACAATGTCCTAAACAACAGTCTAGCCGAGCTCAGGCTGGAT  500

seq1  TCTGACCAGGTAAACAGAGGAATTC  525
      |||||||||||||||||||||||||
seq2  TCTGACCAGGTAAACAGAGGAATTC  525