BAC Information

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BAC

Clone NameB6Ng01-169J15
Chromosome3 (Build37)
Map Location 123,320,263 - 123,320,926
singlet/doubletsinglet
Overlap geneNdst3
Upstream genePpia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik, Prss12, EG668804
Downstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169J15.b
ACCDH960536
length1,017
definitionDH960536|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J15, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaagaaagcaactaacagaggcaaccaaaagcgctttccaaa
gcttaaagaaataggtttccatgtttccccctactcttctggttttggtt
acctgcccctccttatcatgttactctggatcaccctgtttctactttaa
cctttgcatctctagcctctcctttgcctgcttccctgtcacaagtgtgc
cgataccccctttcgtttgacccttccatttacttccctctctagagacc
cttcctatcatcctaacctctccaggcactccaagtctaatgcagaacta
gagaactcataattaggatcaccatatgaaagagaacttgtggttttgtc
tttctgagcctgggttacctcacctggtataatcattttccagttctgct
cattttttttctgtaaatttaaattttctttataatcgaatacaattcca
ttgtgtatattatatatattacatttttaggtagccattcatcaattgaa
ggacaccagtcttgcccatctgtgaaccctgtatgatagttataacacca
atttgttgagcaagctgtgcccattggtgcaataatagtgattaatatag
agataaccaactgcctaatggttgtatttggggtcttctctctggaaagg
aggccatgcttatggctgtgaacctgatcaagagaacatgacctttagag
aagaacctatgatcactattttgataaataggcatgttaaattcccttat
gtttatatctccaaatgagtgctgatctctttcttcattagaaaagctcc
ttacagctctgaatggcattaacagagatgtaagtgatcaaaataccaag
aataaatgagagcggagcacttagtcataggtggacacacccctgacagg
ctcagtaacatcctgagatggggaagtatcagagtggagatgagaggtgt
ggcagacatgacagagacatgcatttcatgactcacaaagctgtgtatca
catgagactgacatgat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_123320263_123320926
seq2: B6Ng01-169J15.b_45_708

seq1  GAATTCACAAAGAAAGCAACTAACAGAGGCAACCAAAAGCGCTTTCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAGAAAGCAACTAACAGAGGCAACCAAAAGCGCTTTCCAAA  50

seq1  GCTTAAAGAAATAGGTTTCCATGTTTCCCCCTACTCTTCTGGTTTTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAGAAATAGGTTTCCATGTTTCCCCCTACTCTTCTGGTTTTGGTT  100

seq1  ACCTGCCCCTCCTTATCATGTTACTCTGGATCACCCTGTTTCTACTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCCCTCCTTATCATGTTACTCTGGATCACCCTGTTTCTACTTTAA  150

seq1  CCTTTGCATCTCTAGCCTCTCCTTTGCCTGCTTCCCTGTCACAAGTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCATCTCTAGCCTCTCCTTTGCCTGCTTCCCTGTCACAAGTGTGC  200

seq1  CGATACCCCCTTTCGTTTGACCCTTCCATTTACTTCCCTCTCTAGAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACCCCCTTTCGTTTGACCCTTCCATTTACTTCCCTCTCTAGAGACC  250

seq1  CTTCCTATCATCCTAACCTCTCCAGGCACTCCAAGTCTAATGCAGAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATCATCCTAACCTCTCCAGGCACTCCAAGTCTAATGCAGAACTA  300

seq1  GAGAACTCATAATTAGGATCACCATATGAAAGAGAACTTGTGGTTTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTCATAATTAGGATCACCATATGAAAGAGAACTTGTGGTTTTGTC  350

seq1  TTTCTGAGCCTGGGTTACCTCACCTGGTATAATCATTTTCCAGTTCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGCCTGGGTTACCTCACCTGGTATAATCATTTTCCAGTTCTGCT  400

seq1  CATTTTTTTTCTGTAAATTTAAATTTTCTTTATAATCGAATACAATTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTCTGTAAATTTAAATTTTCTTTATAATCGAATACAATTCCA  450

seq1  TTGTGTATATTATATATATTACATTTTTAGGTAGCCATTCATCAATTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATATTATATATATTACATTTTTAGGTAGCCATTCATCAATTGAA  500

seq1  GGACACCAGTCTTGCCCATCTGTGAACCCTGTATGATAGTTATAACACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCAGTCTTGCCCATCTGTGAACCCTGTATGATAGTTATAACACCA  550

seq1  ATTTGTTGAGCAAGCTGTGCCCATTGGTGCAATAATAGTGATTAATATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTGAGCAAGCTGTGCCCATTGGTGCAATAATAGTGATTAATATAG  600

seq1  AGATAACCAACTGCCTAATGGTTGTATTTGGGGTCTTCTCTCTGGAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACCAACTGCCTAATGGTTGTATTTGGGGTCTTCTCTCTGGAAAGG  650

seq1  AGGCCATGCTTATG  664
      ||||||||||||||
seq2  AGGCCATGCTTATG  664