BAC Information

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BAC

Clone NameB6Ng01-174G07
Chromosome3 (Build37)
Map Location 145,004,579 - 145,005,351
singlet/doubletsinglet
Overlap geneCol24a1
Upstream geneLOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l
Downstream gene2410019A14Rik, Cyr61, Ddah1, LOC100040331, Bcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174G07.bB6Ng01-174G07.g
ACCGA002486GA002487
length1,243774
definitionB6Ng01-174G07.b B6Ng01-174G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattggcttttgtggagttaatctcctttggttctataacgttt
ttaatcaaaaaatgagggatgggatatcttgccttgtccagttatgcaat
attcagtggcttgggactaagtacagcagagttgaaggattttgagacaa
gacaaaaactctcctaaatgaaagaaacatccctcaatacaaaaggacag
taaataagttgtagttctatctgaaatctttccaaagtaaagaaagtcat
ctaaagacagaaattacgtgggacaaagctcagcggcggcacctaggatc
cagtactcaggaggtggcagaagactgggggtttaaggtaatccttgatg
acaaagtgcatttgaggttagccttaggatacataagacccctatctcaa
aaaacaaaaggaagcaaagcaaagcaaaacaaaacaaagcaaaacaaaaa
caaaacaattagatattgctgtagacttcacaatgcttattagttaatga
aactcgaagtaacacaggtgagcagtgactttatgtgtaacacacgctgt
agttacttcaaaaccaagtcccatgcaacagtaggagccgcatactttcc
tgtactgtcaaaaattaagacaaacagacaaagagctgctggacagacgt
caaagcttgtcagacttcctgatcccagtttcaggtgcatattttgggtg
gaagaggattctgtttttctcagtctatttgtacagttgaggaatttcca
cataacctttcaattggaaatgattagtctacaatgtaatggcatggtac
aagacaaatatcaagggaacaatctaatggaattctacaaattccttcca
cgcactgactatgttcaattaagatcatatgctcataaattgtggacttg
gaagttcctatctctgtgtaagaacgtacaaagatggaatatgtgaatat
tgcaagaatccccaacacagggcagttttaacagatgagcaaacaccata
aaaaaaaagtacaaaatgtcaattagggaaactgaagtggagcttaaaca
ctgttctgtcccaaaagattgtgccttttctccattttccttacaaggta
gactctatacaaaaacttgtattccaattggtatttgttcaactaattta
ttgaaatgagacatagtgaccctaggttcattttgcccacaaattcctaa
gccaaacctctctcaccgagtctctcctcaattattctgtcta
gaattcactctgtctaccttagcctgggctactatgtcaaaattccgctg
gccagatggcttgtaaacaacaaagctttatctctaacatctaagatgct
cagtaggccagcctggatggactctagggagggctgtattcagggcagga
gacagctgccttatatcctggcagggctacccagctcttgacctgttcac
gtaagggccattcatgaggactccacgcatttaacataactacctccaaa
aggccgtgctaccccttaaaccatcaggtctgagtgttggacttagggtt
tcaatgtatgaacttggagcagaaaatgaatattccatccaagcatcccc
cagatctgttctgtgagtttgagatagacccatggcatgataaaggtagg
tgtccatcaagatctacttactcaaccagactctctataccgctatgtct
accttagacagaaacgaggggcggaagtttactgatcctccttgatgaaa
tactattaagacatgtacttgctctacctgggaaataattgtctcattga
cgtagccagaactagaccctccctcccacctttgttatttagtggtcatt
atcacacttggggccttttatgtaatggttttattcattttattaaaact
ttcaacttaacttctctttaaataacaatttcagtatgctacataccatg
ctatactcaataattttatgggaattattcatcattattattattatatc
aaagtttaggtatttgtagatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_145004579_145005351
seq2: B6Ng01-174G07.g_70_843

seq1  GAATTCACTCTGTCTACATTAGCCTGGGCTACTATGTCAAAATTCCGCTG  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTCTACCTTAGCCTGGGCTACTATGTCAAAATTCCGCTG  50

seq1  GCCAGATGGCTTGTAAACAACAAAGCTTTATCTCTAACATCTAAGATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATGGCTTGTAAACAACAAAGCTTTATCTCTAACATCTAAGATGCT  100

seq1  CAGTAGGCCAGCCTGGATGGACTCTAGGGAGGGCTGTATTCAGGGCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGCCAGCCTGGATGGACTCTAGGGAGGGCTGTATTCAGGGCAGGA  150

seq1  GACAGCTGCCTTATATCCTGGCAGGGCTACCCAGCTCTTGACCTGTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGCCTTATATCCTGGCAGGGCTACCCAGCTCTTGACCTGTTCAC  200

seq1  GTAAGGGCCATTCATGAGGACTCCACGCATTTAACATAACTACCTCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGCCATTCATGAGGACTCCACGCATTTAACATAACTACCTCCAAA  250

seq1  AGGCCGTGCTACCCCTTAAACCATCAGGTCTGAGTGTTGGACTTAGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGTGCTACCCCTTAAACCATCAGGTCTGAGTGTTGGACTTAGGGTT  300

seq1  TCAATGTATGAACTTGGAGCAGAAAATGAATATTCCATCCAAGCATCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTATGAACTTGGAGCAGAAAATGAATATTCCATCCAAGCATCCCC  350

seq1  CAGATCTGTTCTGTGAGTTTGAGATAGACCCATGGCATGATAAAGGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGTTCTGTGAGTTTGAGATAGACCCATGGCATGATAAAGGTAGG  400

seq1  TGTCCATCAAGATCTACTTACTCAACCAGACTCTCTATACCGCTATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCAAGATCTACTTACTCAACCAGACTCTCTATACCGCTATGTCT  450

seq1  ACCTTAGACAGAAACGAGGGGCGGAAGTTTACTGATCCTCCTTGATGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGACAGAAACGAGGGGCGGAAGTTTACTGATCCTCCTTGATGAAA  500

seq1  TACTATTAAGACATGTACTTGCTCTACCTGGGAAATAATTGTCTCATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTAAGACATGTACTTGCTCTACCTGGGAAATAATTGTCTCATTGA  550

seq1  CGTAGCCAGAACTAGACCCTCCCTCCCACCTTTGTTA-TTAGTGGTCATT  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CGTAGCCAGAACTAGACCCTCCCTCCCACCTTTGTTATTTAGTGGTCATT  600

seq1  ATCACACTTGGGGCC-TTTATGTAATGGTTTTATTCATTTTTATTAAAAC  648
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  ATCACACTTGGGGCCTTTTATGTAATGGTTTTATTCA-TTTTATTAAAAC  649

seq1  TTTCAACTTAACTTCTCTTTAAATAACAATTTCAGTATGCTACATACCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTTAACTTCTCTTTAAATAACAATTTCAGTATGCTACATACCAT  699

seq1  GCTATACTCAATAATTTTATGGGAATTATTTATTATTATTATTATTATTA  748
      |||||||||||||||||||||||||||||| || ||||||||||||| ||
seq2  GCTATACTCAATAATTTTATGGGAATTATTCATCATTATTATTATTA-TA  748

seq1  TTAAAGTTTAGGTA-TTGTAGATACC  773
      | |||||||||||| |||||||||||
seq2  TCAAAGTTTAGGTATTTGTAGATACC  774