BAC Information

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BAC

Clone NameB6Ng01-175P16
Chromosome3 (Build37)
Map Location 150,193,553 - 150,309,373
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040620, LOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175P16.bB6Ng01-175P16.g
ACCGA003640GA003641
length1,122163
definitionB6Ng01-175P16.b B6Ng01-175P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,308,260 - 150,309,373)(150,193,553 - 150,193,715)
sequence
gaattctaatttgattaatattgactcaactattagatttttattaaact
ccacatagggacaaattggtatcgtctttattaagagttatcacatacag
gttgacaaaaaaaaatgtcattatgcaatctcaatcaacatattgctaaa
taatggatatatgacaaattatttattgcttgctaaaagtaggtcaattg
ctatgacagttgtgtgagatgtagctgttaacaaaccatctttctttttg
cttttcttttgagagcgacttctacaaattagccttaaagctcctctggc
ctctgcatcatagcctcgcactgtgtcgtaaagaagcattcagtctgctg
gttctgggacaccatggcttgaatctagtgttgactttaccatggaaaaa
caagggatcaaggcataaagctttgcatctagagcatctaaggtacacta
tgtgaggtatctattagttccactggttgtatgtatttgtgatatatgaa
aactgtgtgagaaatgataattaaaattaaaacaatcaaaattcttcttc
atactctgtaataaagcagtagtcattgaaaacacaatgtgagaaagcag
gcaattttctcttctatctaatgaatcctgtttctttcgatgttactggt
tgagtggatcactatttactttaaccaagtaactaaattaatctctttta
ctttaatttgtctttgaacagaagtatggatcatgtctcactgtactagg
attagagcatagaagatgatgtattttaggtaaccactgagctaagtccc
taaacaatttttattctagtcagtttaattcctataccctaaaataatat
caaagttgtatattattagatagctggaattttagtaactatttaatgaa
atatacccatattattgttttagaaatcgtttcttttgctaaggcctggt
ggtgataacaaagatgagtgaaccctttcatattttccatgaaaaaagac
tgaatttaaacatttccatattaaagaaaaagcactatatttttgtggcg
atattgcacagctttagagaagtaccacaataagaatatgaattcttgta
agcaaaagccttaagtagtagc

aaaaaataatattagaatttcagaacaaaattaaaaggagaaatatatga
gctccagttggagatctatgaattaaaaaaaaggaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaacgaggaggaggaggag
gaggaggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150308260_150309373
seq2: B6Ng01-175P16.b_49_1170 (reverse)

seq1  GCTACTTACTTAAGGCCTTTGCTTTACAGGATTCATA-TCCTATTGT-GT  48
      ||||| |||||||||| |||||||   || ||||||| || |||||| ||
seq2  GCTAC-TACTTAAGGCTTTTGCTTACAAGAATTCATATTCTTATTGTGGT  49

seq1  ACTTTCTCT-AAGCTGTGCATTATCGCCAC-AAAATATAGTGCTTTTTCT  96
      || |||||| |||||||||| ||||||||| |||||||||||||||||||
seq2  AC-TTCTCTAAAGCTGTGCAATATCGCCACAAAAATATAGTGCTTTTTCT  98

seq1  TTAATATTGGAATGTTT-AATTCAGTCTTTTTTCATGGAAAATATG-AAG  144
      ||||||| | ||||||| |||||||||||||||||||||||||||| |||
seq2  TTAATATGGAAATGTTTAAATTCAGTCTTTTTTCATGGAAAATATGAAAG  148

seq1  GGTTCACTCATCTTTG-TATCACCACCAGGCCTTAGC-AAAGAAACGATT  192
      |||||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  GGTTCACTCATCTTTGTTATCACCACCAGGCCTTAGCAAAAGAAACGATT  198

seq1  TCTAAAACAAT-ATATGGGTATATTTCATTAAATAGTTACT-AAATTCCA  240
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  TCTAAAACAATAATATGGGTATATTTCATTAAATAGTTACTAAAATTCCA  248

seq1  GCTATCTAATAATATACAACTTTGATATTATTTTAGGGTATAGGAATTAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTAATAATATACAACTTTGATATTATTTTAGGGTATAGGAATTAA  298

seq1  ACTGACTAGAATAAAAATTGTTTAGGGACTTAGCTCAGTGGTTACCTAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTAGAATAAAAATTGTTTAGGGACTTAGCTCAGTGGTTACCTAAA  348

seq1  ATACATCATCTTCTATGCTCTAATCCTAGTACAGTGAGACATGATCCATA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCATCTTCTATGCTCTAATCCTAGTACAGTGAGACATGATCCATA  398

seq1  CTTCTGTTCAAAGACAAATTAAAGTAAAAGAGATTAATTTAGTTACTTGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTCAAAGACAAATTAAAGTAAAAGAGATTAATTTAGTTACTTGG  448

seq1  TTAAAGTAAATAGTGATCCACTCAACCAGTAACATCGAAAGAAACAGGAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAATAGTGATCCACTCAACCAGTAACATCGAAAGAAACAGGAT  498

seq1  TCATTAGATAGAAGAGAAAATTGCCTGCTTTCTCACATTGTGTTTTCAAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGATAGAAGAGAAAATTGCCTGCTTTCTCACATTGTGTTTTCAAT  548

seq1  GACTACTGCTTTATTACAGAGTATGAAGAAGAATTTTGATTGTTTTAATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTGCTTTATTACAGAGTATGAAGAAGAATTTTGATTGTTTTAATT  598

seq1  TTAATTATCATTTCTCACACAGTTTTCATATATCACAAATACATACAACC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATCATTTCTCACACAGTTTTCATATATCACAAATACATACAACC  648

seq1  AGTGGAACTAATAGATACCTCACATAGTGTACCTTAGATGCTCTAGATGC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAACTAATAGATACCTCACATAGTGTACCTTAGATGCTCTAGATGC  698

seq1  AAAGCTTTATGCCTTGATCCCTTGTTTTTCCATGGTAAAGTCAACACTAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTATGCCTTGATCCCTTGTTTTTCCATGGTAAAGTCAACACTAG  748

seq1  ATTCAAGCCATGGTGTCCCAGAACCAGCAGACTGAATGCTTCTTTACGAC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCCATGGTGTCCCAGAACCAGCAGACTGAATGCTTCTTTACGAC  798

seq1  ACAGTGCGAGGCTATGATGCAGAGGCCAGAGGAGCTTTAAGGCTAATTTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCGAGGCTATGATGCAGAGGCCAGAGGAGCTTTAAGGCTAATTTG  848

seq1  TAGAAGTCGCTCTCAAAAGAAAAGCAAAAAGAAAGATGGTTTGTTAACAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTCGCTCTCAAAAGAAAAGCAAAAAGAAAGATGGTTTGTTAACAG  898

seq1  CTACATCTCACACAACTGTCATAGCAATTGACCTACTTTTAGCAAGCAAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCTCACACAACTGTCATAGCAATTGACCTACTTTTAGCAAGCAAT  948

seq1  AAATAATTTGTCATATATCCATTATTTAGCAATATGTTGATTGAGATTGC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTTGTCATATATCCATTATTTAGCAATATGTTGATTGAGATTGC  998

seq1  ATAATGACATTTTTTTTTGTCAACCTGTATGTGATAACTCTTAATAAAGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACATTTTTTTTTGTCAACCTGTATGTGATAACTCTTAATAAAGA  1048

seq1  CGATACCAATTTGTCCCTATGTGGAGTTTAATAAAAATCTAATAGTTGAG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACCAATTTGTCCCTATGTGGAGTTTAATAAAAATCTAATAGTTGAG  1098

seq1  TCAATATTAATCAAATTAGAATTC  1114
      ||||||||||||||||||||||||
seq2  TCAATATTAATCAAATTAGAATTC  1122


seq1: chr3_150193553_150193715
seq2: B6Ng01-175P16.g_70_232

seq1  AAAAAATAATATTAGAATTTCAGAACAAAATTAAAAGGAGAAATATATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAATATTAGAATTTCAGAACAAAATTAAAAGGAGAAATATATGA  50

seq1  GCTCCAGTTGGAGATCTATGAATTAAAAAAAAGGAAGAAGAAGAAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGTTGGAGATCTATGAATTAAAAAAAAGGAAGAAGAAGAAGAAGA  100

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACGAGGAGGAGGAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACGAGGAGGAGGAGGAG  150

seq1  GAGGAGGAGGAGG  163
      |||||||||||||
seq2  GAGGAGGAGGAGG  163


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