BAC Information

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BAC

Clone NameB6Ng01-177B11
Chromosome3 (Build37)
Map Location 14,653,823 - 14,654,906
singlet/doubletsinglet
Overlap geneCar13
Upstream gene0710005M24Rik, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929
Downstream geneEG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177B11.bB6Ng01-177B11.g
ACCGA004457GA004458
length1,1961,078
definitionB6Ng01-177B11.b B6Ng01-177B11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttagctctgttccccatttttaatagggttatttgggtct
ctggagtctaccttcttgagttctttgtatatattggatgtaggagtggt
aaaaatgttttcccagtctgttggttgccattttatcctattgacagtgt
ttgccttacagaagctttgtaattttatgaggtcacatttgtcgatcgtt
gatcttagagcataagccactggtgttcttttcagaaaattttcccctgt
gcctatgtgttccaggctcttcctcactttctcttctcttagtttcaatg
tatctagttttgggtggaggtgcttggaccacttggacttgagctttgta
caaggagacaataatggatccatttgcattcttctacataccgacctcca
gttgttccagcactatttgttgaaaatgctgtctttttaccagtagatga
ttttagctccattgtcaaagatcaagtgaccatccgtgtgtgggttcaat
tctgggcctttgttttctgttccattgatctacctgtctgtcactgtacc
atgcagtttttatcactgttgcactgtaatacagcttgaggtcagggatg
gtcattcccccaaaagttcttttattgttgagaataattttaattatcct
ggatttttgttatcccaaatgaatttgaaaatttctctttctaagtctat
gaagaattgagttggaattttggtggggattgcattgaatctgtagattg
ctttcaccatgatggtcacttttactgtattaatcctgccaatccatgag
catgggagatctttccatcttctgagatcttcttcaatttctttcttcag
agacttgaatttcttgtcatacagatcttcctcttgttttcttagagtca
caccaaggtattttatcttacttgtgtctattgaaaagggtgtcatttcc
taatttctttctcaggcctgtttatcctttgaatagaggaaggctacaga
atttgcttggtaatttttgattcaatgcactttgctgagtgttatcaagt
ttagcaagttgtctgatgatggtggtcaattaagtaccatccatctcaat
gaatttgactcttcctcattggattcttgacctcttgattcatgcactgc
tagaactcagattgtactcgactatcagtaactgcgatcgtagagt
gaattccagtggacaacatgcagctgaaaagaaaacacataacataattc
aaacatctgtataagcatgacaaaaaatagaaatgctactaatattgctg
taactgtctgatgtgatgctgaatgataaagtgcctagggactccttcat
ccagacactgactttattccccctaatctactcttatatgaaatgagacc
agaagggttatgggctactagtcgctgtgactcagataccagttacccat
agaacccacctaggtgcttgggctctacagaaagtcaacttcctctaaag
tagcagaggagggtaacagggtttcacttgaaactgtcctgctagatgtt
cctcattgcagtctctcacttttgtggctggggaatttgcatccccttat
gataaactattttagatctagtcatatgcttttattattagatcatttgt
actattgaatgataattgcatacggtaaatgtgcattagtttgtttttat
gtgcaatgttctaatgtaggggtacatcattcccatggtcatactgagct
gactcgcataggcagtttacattttctaccttatatgaatagactcagat
cttttgccaagaacaaatatgattgctgtgggtcaaaaaggcaaaggtgt
ccaagcaagaaaagaagcagctggtgctcacacaagcagaaatttgcaaa
acccaaagaaagccttcttgttagaccccatgaacactagagtatcccaa
acacagaggaatacgagagaaggctgagtaagcacactgactaccagttc
agtttcgcttgaaagaaggacagaaaagccaaagggcattatgccaggcc
tagaggatttagttcctatagtaaatgttgcaggctgggccatgtttgta
acaagcaaagaaaccagggaccaccctcaaaataaagaattcctattgta
tcttgtttggccattgaaaaggggcacctcactcaggtttcatgctctat
ttcctccagtcaagagatgatctagtatataacaattaatactatctcca
tctcaatctactccataccgaatatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14653823_14654906
seq2: B6Ng01-177B11.g_66_1143 (reverse)

seq1  TTCATATTCGTTATGTGGAGTAAGATTTTGAAGGATAGAGATAAAAGTAT  50
      |||||||||| ||  |||||| |||  ||||  ||| |||||   |||||
seq2  TTCATATTCGGTA--TGGAGT-AGA--TTGA--GATGGAGAT---AGTAT  40

seq1  TTATTTGTATATACTAGATCATCTCTGTGACTGAGGGGAAATAGAGCATG  100
      | |||  ||||||||||||||||||| |||||| | ||||||||||||||
seq2  TAATTGTTATATACTAGATCATCTCT-TGACTG-GAGGAAATAGAGCATG  88

seq1  AAAACTGAGTGA-GTGCCCCTTTTTCAATTGCCAAAC-AGATAC-ATAAG  147
      ||| |||||||| ||||||| |||||||| ||||||| |||||| ||| |
seq2  AAACCTGAGTGAGGTGCCCC-TTTTCAATGGCCAAACAAGATACAATAGG  137

seq1  GATTCTT--ATCTGA-GGTGGTCCCTGGTATCTTTGCTTGTTAC-AACAT  193
       ||||||   | ||| ||||||||||||| |||||||||||||| |||||
seq2  AATTCTTTATTTTGAGGGTGGTCCCTGGTTTCTTTGCTTGTTACAAACAT  187

seq1  GGCCCAGCCTGCAACATTTACTATAGGAACTAAATCCTCTAGGCCTGGCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCCTGCAACATTTACTATAGGAACTAAATCCTCTAGGCCTGGCA  237

seq1  TATTGCCCTTTGGCTTCTCTGTCCTTCTTTCAAGCGGAACTGAACTGGTA  293
      || ||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  TAATGCCCTTTGGCTTTTCTGTCCTTCTTTCAAGCGAAACTGAACTGGTA  287

seq1  GTCAGTGTGCTTACTCAGCCTTCTCTCGTATTCCTCTGTGTTTGGGATAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGTGCTTACTCAGCCTTCTCTCGTATTCCTCTGTGTTTGGGATAC  337

seq1  TCTAGTGTTCATGGGGTCTAACAAGAAGGCTTTCTTTGGGTTTTGCAAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGTTCATGGGGTCTAACAAGAAGGCTTTCTTTGGGTTTTGCAAAT  387

seq1  TTCTGCTTGTGTGAGCACCAGCTGCTTCTTTTCTTGCTTGGACACCTTTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTGTGTGAGCACCAGCTGCTTCTTTTCTTGCTTGGACACCTTTG  437

seq1  CCTTTTTGACCCACAGCAATCATATTTGTTCTTGGCAAAAGATCTGAGTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTGACCCACAGCAATCATATTTGTTCTTGGCAAAAGATCTGAGTC  487

seq1  TATTCATATAAGGTAGAAAATGTAAACTGCCTATGCGAGTCAGCTCAGTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATAAGGTAGAAAATGTAAACTGCCTATGCGAGTCAGCTCAGTA  537

seq1  TGACCATGGGAATGATGTACCCCTACATTAGAACATTGCACATAAAAACA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGGGAATGATGTACCCCTACATTAGAACATTGCACATAAAAACA  587

seq1  AACTAATGCACATTTACCGTATGCAATTATCATTCAATAGTACAAATGAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATGCACATTTACCGTATGCAATTATCATTCAATAGTACAAATGAT  637

seq1  CTAATAATAAAAGCATATGACTAGATCTAAAATAGTTTATCATAAGGGGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATAAAAGCATATGACTAGATCTAAAATAGTTTATCATAAGGGGA  687

seq1  TGCAAATTCCCCAGCCACAAAAGTGAGAGACTGCAATGAGGAACATCTAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTCCCCAGCCACAAAAGTGAGAGACTGCAATGAGGAACATCTAG  737

seq1  CAGGACAGTTTCAAGTGAAACCCTGTTACCCTCCTCTGCTACTTTAGAGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGTTTCAAGTGAAACCCTGTTACCCTCCTCTGCTACTTTAGAGG  787

seq1  AAGTTGACTTTCTGTAGAGCCCAAGCACCTAGGTGGGTTCTATGGGTAAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGACTTTCTGTAGAGCCCAAGCACCTAGGTGGGTTCTATGGGTAAC  837

seq1  TGGTATCTGAGTCACAGCGACTAGTAGCCCATAACCCTTCTGGTCTCATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTGAGTCACAGCGACTAGTAGCCCATAACCCTTCTGGTCTCATT  887

seq1  TCATATAAGAGTAGATTAGGGGGAATAAAGTCAGTGTCTGGATGAAGGAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAGAGTAGATTAGGGGGAATAAAGTCAGTGTCTGGATGAAGGAG  937

seq1  TCCCTAGGCACTTTATCATTCAGCATCACATCAGACAGTTACAGCAATAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGGCACTTTATCATTCAGCATCACATCAGACAGTTACAGCAATAT  987

seq1  TAGTAGCATTTCTATTTTTTGTCATGCTTATACAGATGTTTGAATTATGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCATTTCTATTTTTTGTCATGCTTATACAGATGTTTGAATTATGT  1037

seq1  TATGTGTTTTCTTTTCAGCTGCATGTTGTCCACTGGAATTC  1084
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTTTCTTTTCAGCTGCATGTTGTCCACTGGAATTC  1078