BAC Information

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BAC

Clone NameB6Ng01-178C14
Chromosome3 (Build37)
Map Location 71,034,085 - 71,035,192
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041384, LOC625868, LOC670542, EG625901
Downstream geneEG667377, LOC667385, LOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178C14.bB6Ng01-178C14.g
ACCGA005231GA005232
length1,1121,207
definitionB6Ng01-178C14.b B6Ng01-178C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggcaggacaggcatagagacatttgtaggacaactttggaagt
ttatttgccttaatttagtaatgagaatagaattcccccaaatatttttg
atatgatgatgcttatctaattttacatgaagaatacttgaaaataaaat
acacatgcataatagaagacatattaaaactctcagttgagaagagggac
atagaaggtttctgtaagaatacctacacccacctcactccaccacataa
aataagtaagagcctactcagacagccatcaaaaagagctcttaaaatca
tgataaggatcataaagtgtagctctctacaattgatggttctggggtgg
gcagtgtagcaggtgggaaaagactaggttttctttaaggggctggtcac
tgggagtttgaccatgatccagtgagaatatgggcaatacaaattggact
tgttattttatttttcatttttgaaggggaggacacaagagttaggggtg
gacaagcctggaaggacttggaaagcaagtgtgctcagggtgcatattgt
aaaactccccccaaaaatcaataaaaatattatgctggaaaaaaatcact
gcaatagtcttatatgaagagaatagcaacttgatgaaaacaaaatgtag
aaatactctgtagttaacatcttagtggatcaatgcaaaaatgtataaaa
gaaaaattaaaccacatggatcgaatggaaaacattgaattattattgct
tcagatgatacaagtgaatatatatggtatgcaggtatataaatacaaat
gtatttatataacaccagtgataattatatattatatatatatatatata
tatatatacccaaaatttccactagaaaactaatgaaactgaagaaaatt
gaacatactggtacataaaatatttaaaattacacaatttaagaacaaca
gaaaagtttgagccaataattaatttttatgagaaagaatttaattgtca
catataagttgcaaagaatcaaatcttcaccaatgtactaaaacatcctt
ataatgaaaactgcattataagatgtaaacagtaaacattaaagtagaaa
atatattcttat

gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccattccatgcctgacctaaagctttactacagagcaattgtg
attaaaactgcatggtactggtatagagacagacaagtggaccaatggaa
tagaattgaagacccagaaatgaacccacacacctatggtcacttgatct
tcgacaagggagccaaaaccatccagtggaagaaagacagcattttcaac
aattggtgctggcacaactggttgttatcatgtagaagaatgcgaatcga
tccatacttatctccttgtactaaggtcaaatctaagtggatcaaggaac
ttcacataaaaccagagacactgaaacttatagaggagaaagtggggaaa
agccttgaagatatgggcacaggggaaaaattcctgaacagaacagcaat
ggcttgtgctgtaagatcgagaattgacaaatgggacctaatggtatctt
cttaattaccagtaatttcttagctccagctgaccagcatcaattgtttc
attcattcaaaggttttactttagtggttctggtatgtttatgattacag
atgaattcttcagcccaagctaagcagacccatacattattaactcacaa
tatacagcagtcctgatagggtctttaaatgacactcagtttttccttcg
gaacttcccaatccaggccttcattgtcttcaattctcttgatactctta
tattccaaacttccgtagaacaactcaccactctttaaatactcagtgga
agttctatgtgaaatcatgtcccccaatatcagaagctacacagataaac
taattggacagggcaacaacaagttcgaatatgtcaaagtagatgtggga
agcccataagaactttcaaccctgagcaagtactatagacagcataggga
atacagaagagtaggagaaaatgggaaccttcttccaaggaagccaatga
tcatattctaaataccaattggtcattccatgggaaaacacgctcccatt
taagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71034085_71035192
seq2: B6Ng01-178C14.b_46_1157 (reverse)

seq1  ATAAG-ATATA-TTTCTACTTTTATTGTTTACCTGTTTACATC-TATATT  47
      ||||| ||||| ||||||| |||| |||||| ||||||||||| |||| |
seq2  ATAAGAATATATTTTCTAC-TTTAATGTTTA-CTGTTTACATCTTATAAT  48

seq1  GCAGTTTTCATTAT-AGGATGTTTTAGTACATTGGTG-AGATTTGA-TCT  94
      |||||||||||||| |||||||||||||||||||||| |||||||| |||
seq2  GCAGTTTTCATTATAAGGATGTTTTAGTACATTGGTGAAGATTTGATTCT  98

seq1  TTGCAACTTATTATGGTGACAATTAAATTCTTTTCTCAT-ATAATTAATT  143
      |||||||||| ||| ||||||||||||||| |||||||| | ||||||||
seq2  TTGCAACTTA-TAT-GTGACAATTAAATTC-TTTCTCATAAAAATTAATT  145

seq1  ATTGGCTCAAACTTTTCTGTTGTTCTT-AATTGTGTAATTTT-AATATTT  191
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  ATTGGCTCAAACTTTTCTGTTGTTCTTAAATTGTGTAATTTTAAATATTT  195

seq1  TATGTACCAGTATGTTCAATTTTCTTCAGTTTCATTAGTTTTCTAGTGGA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACCAGTATGTTCAATTTTCTTCAGTTTCATTAGTTTTCTAGTGGA  245

seq1  AATTTTGGGTATATATATATATATATATATATATAATATATAATTATCAC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGGTATATATATATATATATATATATATAATATATAATTATCAC  295

seq1  TGGTGTTATATAAATACATTTGTATTTATATACCTGCATACCATATATAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTATATAAATACATTTGTATTTATATACCTGCATACCATATATAT  345

seq1  TCACTTGTATCATCTGAAGCAATAATAATTCAATGTTTTCCATTCGATCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTATCATCTGAAGCAATAATAATTCAATGTTTTCCATTCGATCC  395

seq1  ATGTGGTTTAATTTTTCTTTTATACATTTTTGCATTGATCCACTAAGATG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTTAATTTTTCTTTTATACATTTTTGCATTGATCCACTAAGATG  445

seq1  TTAACTACAGAGTATTTCTACATTTTGTTTTCATCAAGTTGCTATTCTCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTACAGAGTATTTCTACATTTTGTTTTCATCAAGTTGCTATTCTCT  495

seq1  TCATATAAGACTATTGCAGTGATTTTTTTCCAGCATAATATTTTTATTGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAGACTATTGCAGTGATTTTTTTCCAGCATAATATTTTTATTGA  545

seq1  TTTTTGGGGGGAGTTTTACAATATGCACCCTGAGCACACTTGCTTTCCAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGGGGAGTTTTACAATATGCACCCTGAGCACACTTGCTTTCCAA  595

seq1  GTCCTTCCAGGCTTGTCCACCCCTAACTCTTGTGTCCTCCCCTTCAAAAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCAGGCTTGTCCACCCCTAACTCTTGTGTCCTCCCCTTCAAAAA  645

seq1  TGAAAAATAAAATAACAAGTCCAATTTGTATTGCCCATATTCTCACTGGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATAAAATAACAAGTCCAATTTGTATTGCCCATATTCTCACTGGA  695

seq1  TCATGGTCAAACTCCCAGTGACCAGCCCCTTAAAGAAAACCTAGTCTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCAAACTCCCAGTGACCAGCCCCTTAAAGAAAACCTAGTCTTTT  745

seq1  CCCACCTGCTACACTGCCCACCCCAGAACCATCAATTGTAGAGAGCTACA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGCTACACTGCCCACCCCAGAACCATCAATTGTAGAGAGCTACA  795

seq1  CTTTATGATCCTTATCATGATTTTAAGAGCTCTTTTTGATGGCTGTCTGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGATCCTTATCATGATTTTAAGAGCTCTTTTTGATGGCTGTCTGA  845

seq1  GTAGGCTCTTACTTATTTTATGTGGTGGAGTGAGGTGGGTGTAGGTATTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTCTTACTTATTTTATGTGGTGGAGTGAGGTGGGTGTAGGTATTC  895

seq1  TTACAGAAACCTTCTATGTCCCTCTTCTCAACTGAGAGTTTTAATATGTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAACCTTCTATGTCCCTCTTCTCAACTGAGAGTTTTAATATGTC  945

seq1  TTCTATTATGCATGTGTATTTTATTTTCAAGTATTCTTCATGTAAAATTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTATGCATGTGTATTTTATTTTCAAGTATTCTTCATGTAAAATTA  995

seq1  GATAAGCATCATCATATCAAAAATATTTGGGGGAATTCTATTCTCATTAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCATCATCATATCAAAAATATTTGGGGGAATTCTATTCTCATTAC  1045

seq1  TAAATTAAGGCAAATAAACTTCCAAAGTTGTCCTACAAATGTCTCTATGC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAGGCAAATAAACTTCCAAAGTTGTCCTACAAATGTCTCTATGC  1095

seq1  CTGTCCTGCCAGAATTC  1108
      |||||||||||||||||
seq2  CTGTCCTGCCAGAATTC  1112


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