BAC Information

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BAC

Clone NameB6Ng01-181F04
Chromosome3 (Build37)
Map Location 138,986,400 - 138,986,991
singlet/doubletsinglet
Overlap geneB930007M17Rik
Upstream geneAdh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879
Downstream geneLOC100039840, LOC229883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181F04.bB6Ng01-181F04.g
ACCGA007514GA007515
length1,137988
definitionB6Ng01-181F04.b B6Ng01-181F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaacactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgaaaatcaaaacatttcacgacc
tcacaccagtcagaatggctaagatcaaaaattcaggtgaaagcagatgc
tggcaaggatgtagaaaaagaggaacactcctcctttgctggtgggattg
caagcttgtacaaccactctggaagtcaatctggtggttcctcagaaaat
tggacatagtactactggaagatccagcaatacctctcctgggcatatat
ccagaagatgttccaactggtaaaaaggacacatgattcactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgtccct
caagaatggatacagaaaatgtggtacatttacacagtggagtactactc
agctattaaaaacaatgattttatgaaattcctaggcaaatgcatgaatc
tggagggcatcatcctgagtgaggtaacccaatcacaaaagaagtcactt
gatatgcactcactgataaatgtatattagcccagaaacttagaataccc
aagatacaatttgtaaaacacaagcaaatcaagaaggaagactgtgtgga
tgcttcactcctcctcagaagagggaacaaaatacccatgaaaggagtta
cagagacaaagtttggagctaagacaaaaatatagactatccagagacta
cccgacctggggatccatcccataatcagccaccaaactcggacactatt
gcataagccagcaagattttgctgacatgatcctgatatagctgtctcga
gtgaggttatgccagtgcctggcaaatacagaggtggatactcaagttat
ctataggatagaacacagggaccccagtggaggagctagagaagtaccca
aggagctgacgagtctgcaaccctatagtggaacacatatgactaaccag
taccccagagctcgtgtctctagctgcatatgtagcagaagatgggctag
tcgcatcatggtaaagagcccctgtcctgcatttatatgcctagatatgg
aacctcagcaaagatgtgattgggttggttaggcagc
gaattccaaagttcaggcttggcagcaaacatctgcacccactgtgactg
ctatgttcatgtaaactagacacaaacacagtcatccaagagaagggtag
tcaaactcagtagtgtaagcgtcatccaggtggcccatgaagggctcatg
gagaacagctgaggctcagcactgtgaggggccaagagaggtcattgatg
taggtactggtttaggagcagttgaatgcccaggattaaaggggtagtgc
agagacttggcaacatgcagagagcccaagagagctattgtgaaagttta
gcctagttgcaacagaagaccctagtattttgcagatgccagtaccatgt
gaccaccaccaagaacagcagcaatacatttttttttttaaaaaaatctt
tttttaaaattttatttttatttattcccttcacatacctttcaccgccc
ctgctcctagtcacccccttcaacaaaccttccctctacccctccccttg
tcctctgagagggtggaggtccccatggatatcgccacaccctgacacat
caagtccctgcagggctagatgcatcctcccccactggggccagacaaga
cagcccagctagaagaacgtccatcgccttcacacaggcagcagcttttg
ggatagcctctgctccaactgaagctggaccctcagaagaccaagctgca
catctattacatgtgttcagggaggactaggtccagcttgtgtatgttgg
tggttcagtctctgagagccctaaggttagctgactctgttggtgttcct
gtggagttcctatcttcttcagggccctcaaactttcctccgtgctctat
tcactgtttggctgtgagcctaaggagacaacttttaagtgtttgacttt
taaggctgagggacttttaagtttgtaaaatatattaatttttatctact
gtgatgcctttattaatatgtaatcctggggatataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_138986400_138986991
seq2: B6Ng01-181F04.g_66_657

seq1  GAATTCCAAAGTTCAGGCTTGGCAGCAAACATCTGCACCCACTGTGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTTCAGGCTTGGCAGCAAACATCTGCACCCACTGTGACTG  50

seq1  CTATGTTCATGTAAACTAGACACAAACACAGTCATCCAAGAGAAGGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCATGTAAACTAGACACAAACACAGTCATCCAAGAGAAGGGTAG  100

seq1  TCAAACTCAGTAGTGTAAGCGTCATCCAGGTGGCCCATGAAGGGCTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCAGTAGTGTAAGCGTCATCCAGGTGGCCCATGAAGGGCTCATG  150

seq1  GAGAACAGCTGAGGCTCAGCACTGTGAGGGGCCAAGAGAGGTCATTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGCTGAGGCTCAGCACTGTGAGGGGCCAAGAGAGGTCATTGATG  200

seq1  TAGGTACTGGTTTAGGAGCAGTTGAATGCCCAGGATTAAAGGGGTAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACTGGTTTAGGAGCAGTTGAATGCCCAGGATTAAAGGGGTAGTGC  250

seq1  AGAGACTTGGCAACATGCAGAGAGCCCAAGAGAGCTATTGTGAAAGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTGGCAACATGCAGAGAGCCCAAGAGAGCTATTGTGAAAGTTTA  300

seq1  GCCTAGTTGCAACAGAAGACCCTAGTATTTTGCAGATGCCAGTACCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTTGCAACAGAAGACCCTAGTATTTTGCAGATGCCAGTACCATGT  350

seq1  GACCACCACCAAGAACAGCAGCAATACATTTTTTTTTTTAAAAAAATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCACCAAGAACAGCAGCAATACATTTTTTTTTTTAAAAAAATCTT  400

seq1  TTTTTAAAATTTTATTTTTATTTATTCCCTTCACATACCTTTCACCGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAATTTTATTTTTATTTATTCCCTTCACATACCTTTCACCGCCC  450

seq1  CTGCTCCTAGTCACCCCCTTCAACAAACCTTCCCTCTACCCCTCCCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTAGTCACCCCCTTCAACAAACCTTCCCTCTACCCCTCCCCTTG  500

seq1  TCCTCTGAGAGGGTGGAGGTCCCCATGGATATCGCCACACCCTGACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGAGAGGGTGGAGGTCCCCATGGATATCGCCACACCCTGACACAT  550

seq1  CAAGTCCCTGCAGGGCTAGATGCATCCTCCCCCACTGGGGCC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCCTGCAGGGCTAGATGCATCCTCCCCCACTGGGGCC  592