BAC Information

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BAC

Clone NameB6Ng01-182B06
ChromosomeX (Build37)3 (Build37)
Map Location 23,666,616 - 23,667,2256,440,327 - 6,441,255
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneKlhl13, EG635719, Wdr44, EG236749, EG214450, EG245376
Downstream geneLOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216, EG546282, LOC100040417, LOC100040428, LOC100040433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182B06.bB6Ng01-182B06.g
ACCGA008068GA008069
length988929
definitionB6Ng01-182B06.b B6Ng01-182B06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(23,666,616 - 23,667,225)(6,440,327 - 6,441,255)
sequence
gaattctaccctagtggatcctggcttggcatcaggaaagaatgggctgg
gattggtgccctcattgtggcccttgttctggcatgcatgttgtgtgtat
ggtgtatgtgtcggttgtggaatgcccaggtccacactgccaccatggtg
gtgcaagcttttgccacagaggaagcagggcagtcacctcagatttagct
tgttgccatgaagaatgaacaatgaagccatcgctccgcagggttataag
gctaagcactgcacagaggttagtctggaagctgtttgacaatctctggg
aggtatgtctgattgaatgagggttgagtgtcctagtgtccttcccccag
gataaacggcatgggagcaggtcagggttgctctgggtaaaaacctgtga
gcctaagagtcaatcctgtacatggcccctatttctgcacactgggcatc
agacctctatcttcacccatggagcttgcttcaaagaatataaaaggggg
aattgtgggaagccattccggactccctggctagctggacagaaatctgt
gccaggcagtaaacaagcccatatttggtggatggctcgcccttaatccc
tgattggctgaacaagcctgcctggtgaggtgctgtgacctgtggtgaaa
ggttgaggtgtggttgtggcttgagtggataaaaaacacttgtactcgag
gcgctggggatttgaagagagaagctgcctgagtaaactgctttaagaag
aaacggtggttgtgttttccttgctggtcgagtttggacacaacagagaa
cctattgggctacatacaaaaataagttccactattgtgcctttgggtat
acaattgccacgccagtttatttctgtaagtatgacttatttgatagcat
ttcttttttggcaatcgcctacacatactatgatagctaagtctttgggg
gactcaaacattaccaaaaaacaaaatcacactatccc

gaattcattttaatgattagaatatttgttgcacataagctattagttaa
tgctgcgtaagacaaacactcccctgcatatttcaattattgctatggaa
agccctatttttttttttttcagaattagcaaaacagatgctgggccatt
gatcaaaattcatttatgtaattttaggtcacccaggttcattctctcag
catgggttaaaaaacaacctctgccttcacattgaaaggtaatttggggt
gagcaatatcagtatgtgatgtgtctagaagttggggtatgttgcaacaa
tggtttggatattgtaagatgggtttccaccaaaaggccttttatctgaa
atgttcaagtttgtcttaatttagaagtgaggatcaagtaagtcatgctt
ttaaaaactggagcagcaaaatgtttgagatgagggttttgtgttaatat
gcattgggatatcttcagtaaatttagaaattacaatgcttactgcagtc
ttagcaatggcatcttcagacaatgagagcaacagcatactgacatgagc
ttctgtcagtgagaggtgagaactaactatatactgcaggttttgttttt
attttttgtctcaagctatagggtgagtatatagggtgaattttttgcta
tagtagcaaaaaaactgtgctaccagctagaaatgggagtttgtttttgt
tatttccaggaaaatccatgtaaattttcttctcaaaaagaaatatagac
cagtgatgtttataggaggttgctaatttcagggaggaaaaagtgattta
tcaaaaagtgatttaccaaatccactcctaattctgaagataaaaattaa
agagagggtcagtaatgtaaatttccctttattgaattttatattaaatg
gtatccacatcagtacattattagctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_23666616_23667225
seq2: B6Ng01-182B06.b_42_649 (reverse)

seq1  GCCAATCAGGGATTAAGGGTGAGCCATCCACCTAATATGGGCTTGTTTAC  50
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  GCCAATCAGGGATTAAGGGCGAGCCATCCACCAAATATGGGCTTGTTTAC  50

seq1  TGCCTGGCACAGATTTCTGTCCGGCTGGCCAGGGAGTCCAGAATGGCTTC  100
      |||||||||||||||||||||| ||| |||||||||||| ||||||||||
seq2  TGCCTGGCACAGATTTCTGTCCAGCTAGCCAGGGAGTCCGGAATGGCTTC  100

seq1  CCACAATTCCCCCTTTTATATTCTTTTGAAGCAAGCTCCGTGGGTGAAGA  150
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CCACAATTCCCCCTTTTATATTC-TTTGAAGCAAGCTCCATGGGTGAAGA  149

seq1  TAGAGGTCTGATCCCCAGTGTGCAGAAATAGGGGACATGTACAGGATTGA  200
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  TAGAGGTCTGATGCCCAGTGTGCAGAAATAGGGGCCATGTACAGGATTGA  199

seq1  CTCTTAGGCTCACAGGTTTTTACCCAGAGCAACCCTGACCTGCTTCCGTG  250
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  CTCTTAGGCTCACAGGTTTTTACCCAGAGCAACCCTGACCTGCTCCCATG  249

seq1  CCGTTTTTCTTGGGGGAAGGACAGTAGGACACTCAAACCCTCATGCAAAC  300
      |||||| || ||||||||||||| |||||||||| ||||||||| ||| |
seq2  CCGTTTATCCTGGGGGAAGGACACTAGGACACTC-AACCCTCATTCAATC  298

seq1  AGACATACCTCCCAGAGATTGTCACCCAGCTTCCAGACTAACCTCTGTGC  350
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  AGACATACCTCCCAGAGATTGTCAAACAGCTTCCAGACTAACCTCTGTGC  348

seq1  AGTGCTTAGCCTTACAATCCTATGGAGTGATGCCTTCATTGTTCATTCCT  400
      |||||||||||||| || |||  |||| |||| ||||||||||||||| |
seq2  AGTGCTTAGCCTTATAACCCTGCGGAGCGATGGCTTCATTGTTCATTCTT  398

seq1  CATGGCAGCAAGCCAAATCTGAGGTGACTGCCCTGCTTCCACTGTGGCAA  450
      ||||||| ||||| |||||||||||||||||||||||||| |||||||||
seq2  CATGGCAACAAGCTAAATCTGAGGTGACTGCCCTGCTTCCTCTGTGGCAA  448

seq1  AAGCTTGCACCACCATGGCGGCAGTGCAGACCTGGGCATTCTGCAACTGA  500
      |||||||||||||||||| |||||||  |||||||||||||  |||| ||
seq2  AAGCTTGCACCACCATGGTGGCAGTGTGGACCTGGGCATTCCACAACCGA  498

seq1  CACATACACCATACACACAACATGAATGCCAAAACAAGGGCCACAGTGAG  550
      |||||||||||||||||||||||| |||||| ||||||||||||| ||||
seq2  CACATACACCATACACACAACATGCATGCCAGAACAAGGGCCACAATGAG  548

seq1  GGCACCTATCATAGCCCATTCTTTCCCGATGCCAAGCCAGGATCTACTCG  600
      |||||| |||  |||||||||||||| ||||||||||||||||| ||| |
seq2  GGCACCAATCCCAGCCCATTCTTTCCTGATGCCAAGCCAGGATCCACTAG  598

seq1  GGTAGAATTC  610
      ||||||||||
seq2  GGTAGAATTC  608


seq1: chr3_6440327_6441255
seq2: B6Ng01-182B06.g_62_990

seq1  GAATTCATTTTAATGATTAGAATATTTGTTGCACATAAGCTATTAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAATGATTAGAATATTTGTTGCACATAAGCTATTAGTTAA  50

seq1  TGCTGCGTAAGACAAACACTCCCCTGCATATTTCAATTATTGCTATGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCGTAAGACAAACACTCCCCTGCATATTTCAATTATTGCTATGGAA  100

seq1  AGCCCTATTTTTTTTTTTTTCAGAATTAGCAAAACAGATGCTGGGCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTATTTTTTTTTTTTTCAGAATTAGCAAAACAGATGCTGGGCCATT  150

seq1  GATCAAAATTCATTTATGTAATTTTAGGTCACCCAGGTTCATTCTCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAATTCATTTATGTAATTTTAGGTCACCCAGGTTCATTCTCTCAG  200

seq1  CATGGGTTAAAAAACAACCTCTGCCTTCACATTGAAAGGTAATTTGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTTAAAAAACAACCTCTGCCTTCACATTGAAAGGTAATTTGGGGT  250

seq1  GAGCAATATCAGTATGTGATGTGTCTAGAAGTTGGGGTATGTTGCAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATATCAGTATGTGATGTGTCTAGAAGTTGGGGTATGTTGCAACAA  300

seq1  TGGTTTGGATATTGTAAGATGGGTTTCCACCAAAAGGCCTTTTATCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGATATTGTAAGATGGGTTTCCACCAAAAGGCCTTTTATCTGAA  350

seq1  ATGTTCAAGTTTGTCTTAATTTAGAAGTGAGGATCAAGTAAGTCATGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAGTTTGTCTTAATTTAGAAGTGAGGATCAAGTAAGTCATGCTT  400

seq1  TTAAAAACTGGAGCAGCAAAATGTTTGAGATGAGGGTTTTGTGTTAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTGGAGCAGCAAAATGTTTGAGATGAGGGTTTTGTGTTAATAT  450

seq1  GCATTGGGATATCTTCAGTAAATTTAGAAATTACAATGCTTACTGCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGGATATCTTCAGTAAATTTAGAAATTACAATGCTTACTGCAGTC  500

seq1  TTAGCAATGGCATCTTCAGACAATGAGAGCAACAGCATACTGACATGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAATGGCATCTTCAGACAATGAGAGCAACAGCATACTGACATGAGC  550

seq1  TTCTGTCAGTGAGAGGTGAGAACTAACTATATACTGCAGGTTTTGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCAGTGAGAGGTGAGAACTAACTATATACTGCAGGTTTTGTTTTT  600

seq1  ATTTTTTGTCTCAAGCTATAGGGTGAGTATATAGGGTGAATTTTTTGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGTCTCAAGCTATAGGGTGAGTATATAGGGTGAATTTTTTGCTA  650

seq1  TAGTAGCAAAAAAACTGTGCTACCAGCTAGAAATGGGAGTTTGTTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCAAAAAAACTGTGCTACCAGCTAGAAATGGGAGTTTGTTTTTGT  700

seq1  TATTTCCAGGAAAATCCATGTAAATTTTCTTCTCAAAAAGAAATATAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAGGAAAATCCATGTAAATTTTCTTCTCAAAAAGAAATATAGAC  750

seq1  CAGTGATGTTTATAGGAGGTTGCTAATTTCAGGGAGGAAAAAGTGATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTTTATAGGAGGTTGCTAATTTCAGGGAGGAAAAAGTGATTTA  800

seq1  TCAAAAAGTGATTTACCAAATCCACTCCTAATTCTGAAGATAAAAATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGTGATTTACCAAATCCACTCCTAATTCTGAAGATAAAAATTAA  850

seq1  AGAGAGGGTCAGTAATGTAAAATTTCCCTTATTGATTTTTATAATTAAAT  900
      ||||||||||||||||||||| || || ||||||| |||||| |||||||
seq2  AGAGAGGGTCAGTAATGTAAATTTCCCTTTATTGAATTTTAT-ATTAAAT  899

seq1  GGTAT-CACATCAGTACATTATTAGCTGCA  929
      ||||| ||||||||||||||||||||||||
seq2  GGTATCCACATCAGTACATTATTAGCTGCA  929


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