BAC Information

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BAC

Clone NameB6Ng01-183C17
Chromosome3 (Build37)
Map Location 37,238,271 - 37,374,726
singlet/doubletdoublet
Overlap geneFgf2, LOC100040649, Nudt6, Spata5
Upstream geneAnxa5, 1810062G17Rik, LOC665709, Exosc9, Ccna2, Bbs7, Trpc3, 4932438A13Rik, Tenr, LOC652987, Il2, Il21, Cetn4, Bbs12, LOC100041328
Downstream geneLOC665778, Spry1, EG381438, LOC100038875, LOC100041338, EG626367, 4930556A17Rik, LOC665811, EG665821, LOC100041366, LOC100040785, LOC665838, Ankrd50
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183C17.bB6Ng01-183C17.g
ACCGA008868GA008869
length1,1641,171
definitionB6Ng01-183C17.b B6Ng01-183C17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,373,561 - 37,374,726)(37,238,271 - 37,239,431)
sequence
gaattccaaatatttaaaaattaggcaacatatttctaaatactttatca
aacacttgagctgactaaaaatagaacacatctaaggttttgtgaaacat
agggcaatagtttccggagagaaatctttatcatttgtaaagcttcaagt
taataattaaagtaccagccacaaaaatgagaaaacaaaatataaaaaag
gaagttataagaaagaaataaaattaaatataacaaagcaatagagaaaa
atcagtaaagccacagcagtgacatgacagaagaaacttaagaggatggt
ctagtaaaactgacagaacagaaaaaagacacaaaggagagacaaaaaaa
aaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaaga
aagaaagaaagaaaaagaaatctccacccccccaaaaaaaaaaccctgca
tgtttacacaaaatcctgccataaacatttacaatattatccttcattgc
aaaactgatagtttaaatgcctgtgaataagtgtacatataaactgacca
gagttgtactttataaaaactgaacttagatgcacagcaacaacctaact
tcatgaaatgaaagaaatcattctcaagagactacatactgtacatatgc
aactctgtgacattacagaaggaactaatggaatagacgggactactatt
taacacaaataggaagaaaaagggtggtggcataaagtaactctttttga
ataattaaatcagtgtacattataattatgggactgcatcactaactcta
cagttgtcaactcaaaaatttagttcccagctctgtgaccttggtcagat
ttcttaaatgtatatgttgctctttgtaggatcaggtattataatggtat
ctaactcataaagttaagacaggataactaaaaagatatctaacatatta
taaatgcatcacttaaaaaactggagttgaatatgccatactttagcact
caaaagagaaaatgcatttctatgtacttgcgttacagcctttactaata
ggtaaatagaagatcttccagtcaagtcatgggttattgtcacaaagggt
aaaggataagaactagcccaagcaacagaactgatacactcaaatcacat
gtatgtaggcagcc
gaattcagtctcataacatttcctgatttccaaaatgagttgactgattt
tgtcgttgccctttccttcaatgtgggaacagcaaggctgagaagacgct
tgtaggggcttcctgaggtatcggtttatatttgtgttttgaggttgtta
tcagtgagtaagaccattctctagaagtatcagaattggtggtcctgaac
actaatagttctacccatgatatcctcagcaactgaaaaaatgtgtataa
tttatgggagtgaaatggacttttcttacttgatgattgaagcaaagaca
agaccacacaggctgcatgatcaagtcagactcataccttttgcagtctg
cacactgatgccattaataatgcttcatgctggtgaggtgggtatgaaca
tgtctggggatccatttattctcagaggaccaggaaatgggaaatatatt
aacaagcagctgaggtgaaaacaaaaatgtggagaacaagacactaaaac
ttgaatgatcgagaaagaaaaagtcaagcagattttatattttttccatc
aaaactgcatggcatgtgtagaatatgcttagcaaaaaaatgaacaatta
aaaggttagggtattcagctggaattcatatctattcccccaaatatcct
tgttggggtttgtagaatattctccccagactcagagtttcttgggtctc
cgactggtggtactgttctggacgcttatggagactttaggaagtagatc
cttgcaggaggaagtgggtaactggggagttgaccttgatgttttataac
ccggcctatactcttgtctgctcgctacttcttgattgcataggcaacgt
gaccaggtacctcattctcctgccaccatgccttccctactgtgatggac
tatatcctggcattgtaagccagaatcatttctttgtcccttaagttggt
tacaacaatggaaaaaaataactaatacagttttcacttcttgttcactt
tcctgtctgtatatccatctcaggtccatcttctgtacagaagtgccagt
cttttcccttcctactgcagtaacactgactgattcttagccctacagtg
attgccatctgttcagtgggccttgcttcgaaccgccaattgcttgggag
aacttgtcaattaggctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_37373561_37374726
seq2: B6Ng01-183C17.b_46_1209 (reverse)

seq1  GGCTGCTTACATACATGGTGATGTGA-TGTATCAGTTTCTTGTTGC-TGG  48
      |||||| ||||||||| ||||| ||| ||||||||||   |||||| |||
seq2  GGCTGCCTACATACAT-GTGATTTGAGTGTATCAGTT--CTGTTGCTTGG  47

seq1  GCTAAGTTCTTATCCTTT-CCCTTTGTGACCATTACCCATGACTTTGACT  97
      ||| |||||||||||||| ||||||||||| || ||||||||| ||||||
seq2  GCT-AGTTCTTATCCTTTACCCTTTGTGACAATAACCCATGAC-TTGACT  95

seq1  GGAAGATCTCTTATTTACCTATAAGTAAAGGCTGTAACGCAAGTACATAG  147
      |||||||||  ||||||||||| |||||||||||||||||||||||||||
seq2  GGAAGATCTTCTATTTACCTATTAGTAAAGGCTGTAACGCAAGTACATAG  145

seq1  AAATGCATTTTCTCTTTTGAGTGCTAAAGTATGGCATATTCAACTCCAGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATTTTCTCTTTTGAGTGCTAAAGTATGGCATATTCAACTCCAGT  195

seq1  TTTTTAAGTGATGCATTTATAATATGTTAGATATCTTTTTAGTTATCCTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTGATGCATTTATAATATGTTAGATATCTTTTTAGTTATCCTG  245

seq1  TCTTAACTTTATGAGTTAGATACCATTATAATACCTGATCCTACAAAGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTTTATGAGTTAGATACCATTATAATACCTGATCCTACAAAGAG  295

seq1  CAACATATACATTTAAGAAATCTGACCAAGGTCACAGAGCTGGGAACTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATATACATTTAAGAAATCTGACCAAGGTCACAGAGCTGGGAACTAA  345

seq1  ATTTTTGAGTTGACAACTGTAGAGTTAGTGATGCAGTCCCATAATTATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAGTTGACAACTGTAGAGTTAGTGATGCAGTCCCATAATTATAA  395

seq1  TGTACACTGATTTAATTATTCAAAAAGAGTTACTTTATGCCACCACCCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACTGATTTAATTATTCAAAAAGAGTTACTTTATGCCACCACCCTT  445

seq1  TTTCTTCCTATTTGTGTTAAATAGTAGTCCCGTCTATTCCATTAGTTCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCTATTTGTGTTAAATAGTAGTCCCGTCTATTCCATTAGTTCCT  495

seq1  TCTGTAATGTCACAGAGTTGCATATGTACAGTATGTAGTCTCTTGAGAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATGTCACAGAGTTGCATATGTACAGTATGTAGTCTCTTGAGAAT  545

seq1  GATTTCTTTCATTTCATGAAGTTAGGTTGTTGCTGTGCATCTAAGTTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTCATTTCATGAAGTTAGGTTGTTGCTGTGCATCTAAGTTCAG  595

seq1  TTTTTATAAAGTACAACTCTGGTCAGTTTATATGTACACTTATTCACAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAAAGTACAACTCTGGTCAGTTTATATGTACACTTATTCACAGG  645

seq1  CATTTAAACTATCAGTTTTGCAATGAAGGATAATATTGTAAATGTTTATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAACTATCAGTTTTGCAATGAAGGATAATATTGTAAATGTTTATG  695

seq1  GCAGGATTTTGTGTAAACATGCAGGGTTTTTTTTTTGGGGGGGTGGAGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATTTTGTGTAAACATGCAGGGTTTTTTTTTTGGGGGGGTGGAGAT  745

seq1  TTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTT  795

seq1  CTTTCTTTCTTTCTTTTTTTTTTTTTGTCTCTCCTTTGTGTCTTTTTTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTTTTTTTTTTTGTCTCTCCTTTGTGTCTTTTTTCT  845

seq1  GTTCTGTCAGTTTTACTAGACCATCCTCTTAAGTTTCTTCTGTCATGTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTCAGTTTTACTAGACCATCCTCTTAAGTTTCTTCTGTCATGTCA  895

seq1  CTGCTGTGGCTTTACTGATTTTTCTCTATTGCTTTGTTATATTTAATTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGGCTTTACTGATTTTTCTCTATTGCTTTGTTATATTTAATTTT  945

seq1  ATTTCTTTCTTATAACTTCCTTTTTTATATTTTGTTTTCTCATTTTTGTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTTATAACTTCCTTTTTTATATTTTGTTTTCTCATTTTTGTG  995

seq1  GCTGGTACTTTAATTATTAACTTGAAGCTTTACAAATGATAAAGATTTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTACTTTAATTATTAACTTGAAGCTTTACAAATGATAAAGATTTCT  1045

seq1  CTCCGGAAACTATTGCCCTATGTTTCACAAAACCTTAGATGTGTTCTATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGAAACTATTGCCCTATGTTTCACAAAACCTTAGATGTGTTCTATT  1095

seq1  TTTAGTCAGCTCAAGTGTTTGATAAAGTATTTAGAAATATGTTGCCTAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCAGCTCAAGTGTTTGATAAAGTATTTAGAAATATGTTGCCTAAT  1145

seq1  TTTTAAATATTTGGAATTC  1166
      |||||||||||||||||||
seq2  TTTTAAATATTTGGAATTC  1164

seq1: chr3_37238271_37239431
seq2: B6Ng01-183C17.g_60_1230

seq1  GAATTCAGTCTCATAACATTTCCTGATTTCCAAAATGAGTTGACTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCATAACATTTCCTGATTTCCAAAATGAGTTGACTGATTT  50

seq1  TGTCGTTGCCCTTTCCTTCAATGTGGGAACAGCAAGGCTGAGAAGACGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTTGCCCTTTCCTTCAATGTGGGAACAGCAAGGCTGAGAAGACGCT  100

seq1  TGTAGGGGCTTCCTGAGGTATCGGTTTATATTTGTGTTTTGAGGTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGGCTTCCTGAGGTATCGGTTTATATTTGTGTTTTGAGGTTGTTA  150

seq1  TCAGTGAGTAAGACCATTCTCTAGAAGTATCAGAATTGGTGGTCCTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGTAAGACCATTCTCTAGAAGTATCAGAATTGGTGGTCCTGAAC  200

seq1  ACTAATAGTTCTACCCATGATATCCTCAGCAACTGAAAAAATGTGTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAGTTCTACCCATGATATCCTCAGCAACTGAAAAAATGTGTATAA  250

seq1  TTTATGGGAGTGAAATGGACTTTTCTTACTTGATGATTGAAGCAAAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGGAGTGAAATGGACTTTTCTTACTTGATGATTGAAGCAAAGACA  300

seq1  AGACCACACAGGCTGCATGATCAAGTCAGACTCATACCTTTTGCAGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACACAGGCTGCATGATCAAGTCAGACTCATACCTTTTGCAGTCTG  350

seq1  CACACTGATGCCATTAATAATGCTTCATGCTGGTGAGGTGGGTATGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATGCCATTAATAATGCTTCATGCTGGTGAGGTGGGTATGAACA  400

seq1  TGTCTGGGGATCCATTTATTCTCAGAGGACCAGGAAATGGGAAATATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGGGATCCATTTATTCTCAGAGGACCAGGAAATGGGAAATATATT  450

seq1  AACAAGCAGCTGAGGTGAAAACAAAAATGTGGAGAACAAGACACTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGCTGAGGTGAAAACAAAAATGTGGAGAACAAGACACTAAAAC  500

seq1  TTGAATGATCGAGAAAGAAAAAGTCAAGCAGATTTTATATTTTTTCCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGATCGAGAAAGAAAAAGTCAAGCAGATTTTATATTTTTTCCATC  550

seq1  AAAACTGCATGGCATGTGTAGAATATGCTTAGCAAAAAAATGAACAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGCATGGCATGTGTAGAATATGCTTAGCAAAAAAATGAACAATTA  600

seq1  AAAGGTTAGGGTATTCAGCTGGAATTCATATCTATTCCCCCAAATATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTAGGGTATTCAGCTGGAATTCATATCTATTCCCCCAAATATCCT  650

seq1  TGTTGGGGTTTGTAGAATATTCTCCCCAGACTCAGAGTTTCTTGGGTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGTTTGTAGAATATTCTCCCCAGACTCAGAGTTTCTTGGGTCTC  700

seq1  CGACTGGTGGTACTGTTCTGGACGCTTATGGAGACTTTAGGAAGTAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGGTGGTACTGTTCTGGACGCTTATGGAGACTTTAGGAAGTAGATC  750

seq1  CTTGCAGGAGGAAGTGGGTAACTGGGGAGTTGACCTTGATGTTTTATAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGAGGAAGTGGGTAACTGGGGAGTTGACCTTGATGTTTTATAAC  800

seq1  CCGGCCTATACTCTTGTCTGCTCGCTACTTCTTGATTGCATAGGCAACGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCTATACTCTTGTCTGCTCGCTACTTCTTGATTGCATAGGCAACGT  850

seq1  GACCAGGTACCTCATTCTCCTGCCACCATGCCTTCCCTACTGTGATGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTACCTCATTCTCCTGCCACCATGCCTTCCCTACTGTGATGGAC  900

seq1  TATATCCTGGCATTGTAAGCCAGAATCATTTCTTTGTCCCTTAAGTTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCTGGCATTGTAAGCCAGAATCATTTCTTTGTCCCTTAAGTTGGT  950

seq1  TACAACAAT-GAAAAAAATAACTAATACAGTTTTCACTTC-TGTTCAC-T  997
      ||||||||| |||||||||||||||||||||||||||||| ||||||| |
seq2  TACAACAATGGAAAAAAATAACTAATACAGTTTTCACTTCTTGTTCACTT  1000

seq1  TCCTGTTCTTGTATATCCATCTCAGGTCCATC-TCTGTACAGAAGTGCCA  1046
      ||||||   ||||||||||||||||||||||| |||||||||||||||||
seq2  TCCTGT--CTGTATATCCATCTCAGGTCCATCTTCTGTACAGAAGTGCCA  1048

seq1  GTC-TTTCCCTTCCTACTGCAAGTTAACACTGACTGA-TCTTAG-CCTAC  1093
      ||| |||||||||||||||||   ||||||||||||| |||||| |||||
seq2  GTCTTTTCCCTTCCTACTGCA--GTAACACTGACTGATTCTTAGCCCTAC  1096

seq1  AGTGATGCCCATCTGTTCAGTGG--CTTGCTTCAGACAGC--AATGCTT-  1138
      ||||||  |||||||||||||||  ||||||||  || ||  | ||||| 
seq2  AGTGATTGCCATCTGTTCAGTGGGCCTTGCTTCGAACCGCCAATTGCTTG  1146

seq1  TGAGAACT--GCCATTAGGCTCTCT  1161
       |||||||   | ||||||||||||
seq2  GGAGAACTTGTCAATTAGGCTCTCT  1171