BAC Information

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BAC

Clone NameB6Ng01-183K20
Chromosome3 (Build37)
Map Location 158,017,240 - 158,018,333
singlet/doubletsinglet
Overlap geneLrrc7
Upstream geneLOC546818, Zranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c, Sfrs11, Lrrc40
Downstream geneLOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183K20.bB6Ng01-183K20.g
ACCGA009242GA009243
length1,092493
definitionB6Ng01-183K20.b B6Ng01-183K20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaggagaccttgacttatatagtttttagtatatagtatta
tatttatcttattatacttttacacatattatataatatatgaaatattt
tatatcttaaattcacatcactgtagtttgatgactacagaattagtatt
aaatgaatattaactcaaactttgcatttcatttggtgtgtgtgtgtgtg
tgtgtgtgtagaacagaggtaatcctcaggtgtgatttttaggagcaagt
cacgttttctgattttttttgtttttgttttgttttgttttcctgagatg
ggtctctctttagcctcataaatgcttgctgaattgtctaggctggcttg
ccagcaaaccacagggatcctcctatctctgtctccccaactcagggact
catgaattgatgtttgtgtgacaagctctttaccaactgatcctgattta
tttcttcagactgttaattatttttttgtagaatagtaatttattgctga
ggggatgaagagatggctcagcagttaagagtgcttgctcctcttgcaaa
agaccagtgttttgtttcaagcaccaattctaggtagctctgcaggcatc
taggcccccaccctccctacacactcacatgcacacatagatgctcacac
atctgtaaaaatgtattatttaaataaaaaataatgacatttatttaaaa
aattgtatagcattttattcttaaagtttcatagtttgactcagatttgg
aagcaaccaggcacaatttacttaaaagctgctgagttttcatccaaggc
tgtccttatgtctcttttaacttctgaaattcctgcaaggatattctggg
gacaagttggtgaataagcacttatatactttttttttcacaatggagcc
tgaagaacactgaaagccttaatagatgatttttcttctcatctgcattc
catcattccaactctgacacttcccatttctagggaatgaatcacaagac
ttggtaactattgttttaccaattttactgaaattgtgggattgtgggac
aactttctgtctctacctgaatctggcacatactaaaaaatc

ttttaaacaattagtaaagaaacttgacaaagaaaggtgaattttttcta
accttgattaataaaataaaataaaataaaataaaaaccttctaacttgc
aacacaatcatagtagtaccctaagactagtcagaagagaatttttttcc
atatttttaaatttttttagattataatataatttcataatttctacttt
aactttccttcctcttaactctactatatattcttcctggctctttctaa
ttcatggcctctttttaaattgtcataacacgcatatatatatatatata
tatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtaag
agagagggggtgagtgagagagagagagggagagtgtatatgagagagcg
agagagagagagagagagagagaaaaaaaaaaaaagattttgtgttcaaa
atatatttatatttctgaatatatttattcgtatacctattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158017240_158018333
seq2: B6Ng01-183K20.b_47_1138

seq1  GAATTCTTTAAGGAGACCTTGACTTATATAGTTTTTAGTATATAGTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAGGAGACCTTGACTTATATAGTTTTTAGTATATAGTATTA  50

seq1  TATTTATCTTATTATACTTTTACACATATTATATAATATATGAAATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTTATTATACTTTTACACATATTATATAATATATGAAATATTT  100

seq1  TATATCTTAAATTCACATCACTGTAGTTTGATGACTACAGAATTAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTAAATTCACATCACTGTAGTTTGATGACTACAGAATTAGTATT  150

seq1  AAATGAATATTAACTCAAACTTTGCATTTCATTTGGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATATTAACTCAAACTTTGCATTTCATTTGGTGTGTGTGTGTGTG  200

seq1  TGTGTGTGTAGAACAGAGGTAATCCTCAGGTGTGATTTTTAGGAGCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTAGAACAGAGGTAATCCTCAGGTGTGATTTTTAGGAGCAAGT  250

seq1  CACGTTTTCTGATTTTTTTTGTTTTTGTTTTGTTTTGTTTTCCTGAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTTTCTGATTTTTTTTGTTTTTGTTTTGTTTTGTTTTCCTGAGATG  300

seq1  GGTCTCTCTTTAGCCTCATAAATGCTTGCTGAATTGTCTAGGCTGGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTCTTTAGCCTCATAAATGCTTGCTGAATTGTCTAGGCTGGCTTG  350

seq1  CCAGCAAACCACAGGGATCCTCCTATCTCTGTCTCCCCAACTCAGGGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAACCACAGGGATCCTCCTATCTCTGTCTCCCCAACTCAGGGACT  400

seq1  CATGAATTGATGTTTGTGTGACAAGCTCTTTACCAACTGATCCTGATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTGATGTTTGTGTGACAAGCTCTTTACCAACTGATCCTGATTTA  450

seq1  TTTCTTCAGACTGTTAATTATTTTTTTGTAGAATAGTAATTTATTGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAGACTGTTAATTATTTTTTTGTAGAATAGTAATTTATTGCTGA  500

seq1  GGGGATGAAGAGATGGCTCAGCAGTTAAGAGTGCTTGCTCCTCTTGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGAAGAGATGGCTCAGCAGTTAAGAGTGCTTGCTCCTCTTGCAAA  550

seq1  AGACCAGTGTTTTGTTTCAAGCACCAATTCTAGGTAGCTCTGCAGGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTGTTTTGTTTCAAGCACCAATTCTAGGTAGCTCTGCAGGCATC  600

seq1  TAGGCCCCCACCCTCCCTACACACTCACATGCACACATAGATGCTCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCCCACCCTCCCTACACACTCACATGCACACATAGATGCTCACAC  650

seq1  ATCTGTAAAAATGTATTATTTAAATAAAAAATAATGACATTTATTTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAAAAATGTATTATTTAAATAAAAAATAATGACATTTATTTAAAA  700

seq1  AATTGTATAGCATTTTATTCTTAAAGTTTCATAGTTTGACTCAGATTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATAGCATTTTATTCTTAAAGTTTCATAGTTTGACTCAGATTTGG  750

seq1  AAGCAACCAGGCACAATTTACTTAAAAGCTGCTGAGTTTTCATCCAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCAGGCACAATTTACTTAAAAGCTGCTGAGTTTTCATCCAAGGC  800

seq1  TGTCCTTATGTCTCTTTTAACTTCTGAAATTCCTGCAAGGATATTCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTATGTCTCTTTTAACTTCTGAAATTCCTGCAAGGATATTCTGGG  850

seq1  GACAAGTTGGTGAATAAGCACTTATATAC-TTTTTTTTCACAATGGAGCC  899
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GACAAGTTGGTGAATAAGCACTTATATACTTTTTTTTTCACAATGGAGCC  900

seq1  TGAAGAACACTGAAAGCCTTAATAAGATGATTTTTCTTCTCATCTGCATT  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGAAGAACACTGAAAGCCTTAAT-AGATGATTTTTCTTCTCATCTGCATT  949

seq1  CCATCATTCCAACTCTGACACTTCCCATTTCTAGGGAATGAATCACAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTCCAACTCTGACACTTCCCATTTCTAGGGAATGAATCACAAGA  999

seq1  CTTGGTAACTATTGTTTTACCAAATTTTACTGAAATTGTGGGATTGTGGG  1049
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTGGTAACTATTGTTTTACC-AATTTTACTGAAATTGTGGGATTGTGGG  1048

seq1  ACAACTTTCTGTCTCTACCTGGAATCTGGCACATACTAAAAAATC  1094
      |||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACAACTTTCTGTCTCTACCT-GAATCTGGCACATACTAAAAAATC  1092


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