BAC Information

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BAC

Clone NameB6Ng01-184M20
Chromosome3 (Build37)
Map Location 125,315,120 - 125,316,084
singlet/doubletsinglet
Overlap geneNdst4
Upstream geneLOC668820
Downstream geneUgt8a, Arsj, Camk2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184M20.bB6Ng01-184M20.g
ACCGA010085GA010086
length943991
definitionB6Ng01-184M20.b B6Ng01-184M20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggcatactgaatgtctgaaagtacctgaaaaaatgt
tcagcatccttaatcatcagggaaatgcaaatcaaaggaagcctgagatt
ccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactctaccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcag
aaaattggacatagttctgctggaggatcccgcagtacctctcctgggca
taaattgcgaatatgtttcaaccagtaagaaggatacatgctccactatg
ttcatagcagccttatttatgatagccagaagctggaaagaacccagatg
cccctaaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaattaatgatgttcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacccatttttactg
agactatggagtgatcacaaaaagggacctatcatgactgctctcagaag
gacccaacaagaagctgaaagagtcagatccagttatttgtacccaacta
atggagagaagctgttgacctctgtggttgaattaggggaaaatttggaa
gaagctaaggaggagggtgaccttgtagaagggaccaggagttttaatta
aactggacccctgatgtctctcagacactctatcaccaacaaggcagcat
acactagctaatatgaggcccccaacacatatacatcagaggactgctgt
gtctgggttcagtcagagaggatgcacctaatcttcaagagactggaggt
cccaaggagtttagaggtcaggtggaatggggagtgggggaac
gaattctttatcataaaaagatagtagctttctaaatgttttttcatgca
caattagatgattatattcattttattcttcattcatttcttaacaggat
aaatagataacattacatgattttcatattctgcattatccttccatcct
tggaataaatcctgtatgtgcatggtgaagaattattttaataaaccatt
gaggttgtttggctagtgttgctcatgtatcccacccctgagcgttctta
tacccatatttataaaggacattaacaaataatcctttgcttttgatgtg
ttgttctttgtaattactattggggtaatgttggtttcataacaggtgtt
cggaagtttacttattcatcaaatttttggacaaatttgagaaaaattaa
tagtaacccaaaatattttcttggtcttcatgaaatcagaaaattctgaa
tacgtttgtagagactttttttttagataatactataattacatcatttc
actctttcctttccttcccccatctcccctatattcccttattgttctct
ttcaaattcatggcctcttttttcattaattgttatggtattcatgtatg
tatataactgtatattttaagtataaccagcctagtctatataatgttat
atgtatggacatttgcagagctgacaatttgaattgaattgacaatattg
aataaccagcaggtgttttctaaaatgaggaagactatttctgccaagct
cagcatctttcagctgcttatagctctttgtgtggaattaaagcctcttg
gtctttcctttgtccattttggcctacttattactataaaccttgctcag
ctcttgtttggacaataacttctgaaattcctaggagacctttctcacag
caaactctttgatcatctggctcttaaggtcactctgggacctttttcag
aaaatgttacctgagcattagtgctagagtattgttgatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125315120_125316084
seq2: B6Ng01-184M20.g_65_1031

seq1  GAATTCTTTATCATAAAAAGATAGTAGCTTTCTAAATGTTTTTTCATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCATAAAAAGATAGTAGCTTTCTAAATGTTTTTTCATGCA  50

seq1  CAATTAGATGATTATATTCATTTTATTCTTCATTCATTTCTTAACAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGATGATTATATTCATTTTATTCTTCATTCATTTCTTAACAGGAT  100

seq1  AAATAGATAACATTACATGATTTTCATATTCTGCATTATCCTTCCATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATAACATTACATGATTTTCATATTCTGCATTATCCTTCCATCCT  150

seq1  TGGAATAAATCCTGTATGTGCATGGTGAAGAATTATTTTAATAAACCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAAATCCTGTATGTGCATGGTGAAGAATTATTTTAATAAACCATT  200

seq1  GAGGTTGTTTGGCTAGTGTTGCTCATGTATCCCACCCCTGAGCGTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTTTGGCTAGTGTTGCTCATGTATCCCACCCCTGAGCGTTCTTA  250

seq1  TACCCATATTTATAAAGGACATTAACAAATAATCCTTTGCTTTTGATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATATTTATAAAGGACATTAACAAATAATCCTTTGCTTTTGATGTG  300

seq1  TTGTTCTTTGTAATTACTATTGGGGTAATGTTGGTTTCATAACAGGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTGTAATTACTATTGGGGTAATGTTGGTTTCATAACAGGTGTT  350

seq1  CGGAAGTTTACTTATTCATCAAATTTTTGGACAAATTTGAGAAAAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGTTTACTTATTCATCAAATTTTTGGACAAATTTGAGAAAAATTAA  400

seq1  TAGTAACCCAAAATATTTTCTTGGTCTTCATGAAATCAGAAAATTCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAACCCAAAATATTTTCTTGGTCTTCATGAAATCAGAAAATTCTGAA  450

seq1  TACGTTTGTAGAGACTTTTTTTTTAGATAATACTATAATTACATCATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTTGTAGAGACTTTTTTTTTAGATAATACTATAATTACATCATTTC  500

seq1  ACTCTTTCCTTTCCTTCCCCCATCTCCCCTATATTCCCTTATTGTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCCTTTCCTTCCCCCATCTCCCCTATATTCCCTTATTGTTCTCT  550

seq1  TTCAAATTCATGGCCTCTTTTTTCATTAATTGTTATGGTATTCATGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTCATGGCCTCTTTTTTCATTAATTGTTATGGTATTCATGTATG  600

seq1  TATATAACTGTATATTTTAAGTATAACCAGCCTAGTCTATATAATGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAACTGTATATTTTAAGTATAACCAGCCTAGTCTATATAATGTTAT  650

seq1  ATGTATGGACATTTGCAGAGCTGACAATTTGAATTGAATTGACAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGGACATTTGCAGAGCTGACAATTTGAATTGAATTGACAATATTG  700

seq1  AATAACCAGCAGGTGTTTTCTAAAATGAGGAAGACTATTTCTGCCAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCAGCAGGTGTTTTCTAAAATGAGGAAGACTATTTCTGCCAAGCT  750

seq1  CAGCATCTTTCAGCTGCTTATAGCTCTTTGTGTGGAATTAAAGCCTCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTTTCAGCTGCTTATAGCTCTTTGTGTGGAATTAAAGCCTCTTG  800

seq1  GTCTTTCCTTTGTCCATTTTGGCCTACTTATTACTATAAACCTTGCTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCCTTTGTCCATTTTGGCCTACTTATTACTATAAACCTTGCTCAG  850

seq1  CTCTTGTTTGGACAATAACTTCTGAAATTCCTAGGAGACCTTTCTCACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTTGGACAATAACTTCTGAAATTCCTAGGAGACCTTTCTCACAG  900

seq1  CAAACTCTTTGATCATCTGGCTCTTAAGGTCACTCT-GGACCTTTTTCAG  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAAACTCTTTGATCATCTGGCTCTTAAGGTCACTCTGGGACCTTTTTCAG  950

seq1  -AAATGTTACCTGAGCA  965
       ||||||||||||||||
seq2  AAAATGTTACCTGAGCA  967