BAC Information

Click to search

BAC

Clone NameB6Ng01-186C20
Chromosome3 (Build37)
Map Location 6,111,701 - 6,112,783
singlet/doubletsinglet
Overlap genenone
Upstream geneZfhx4, Pxmp3, EG620382, EG667759, LOC100041165
Downstream geneLOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186C20.bB6Ng01-186C20.g
ACCGA011091GA011092
length1,1901,076
definitionB6Ng01-186C20.b B6Ng01-186C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaactctgtaaccccatcttcaatagggttattttttttcct
agactccaatttcttgggtgatatatatatatatatatatatatatatat
atatatatatcccctatcagatttaagattggcaaagatttttttttccc
aatctgttggtggcgtttttgtattattgacagtgttctttgccttacag
aagctttgcaattttatgaggtcccatttttcagttcttgatatatagca
aaccagtagccaacatcaaactaaatggagagaaactggaagcaatctca
ctaaaattagggactagacaaggctgcccagtttctccctacatattcaa
tataatacctgaattcctagccagagcaattagacaacaaaaggagatca
aggggatacaatttggaaaggaagaagtcaaaatatcactatttgcagat
gatatgaccctaaaaactccactagagaactcctaaagctgataaacaac
ttcctcaagtggcttgatataagattaacaaatcggtggcttctgtctac
acagaggataaacaggctgagaaagaaattagggaaacaacacccttcac
aatagtcacaaataatataaaataccttggcatgactctaactaagggag
tgaaagatcagcatgataagaatttccaagtctctgaagaaagaaatcaa
agatctcagaagatggaaagatcccccatgcacatagattgccaggatta
atataataaaaatggctttatttctgaaagtagtctgcagattcaatcca
attcccatcaaaattccaaagcaattcttcaccaagttagaaagggcaat
ttgcaaattaatctggaataacaaaaaacctaggttagcaaaaattactc
tcaacagtaaaagaacctctggcagaatcaccatgcctgaccctcaagct
gcactacaagcaatttgtgaataaaaactgcatggtactgggtacaatga
cagatagttagatcaatgggatagatcgaggacccagaaatgaacccata
catctatggtcactttgaatctttgaccagggatctaaaacaccagtgga
aaaaatacagcatcacaaatggtgcctggccactgctgttatgtagagat
gtgaattgatccattcctaatctcctctgtacacaaaagc
gaattcaaacatgatgaaatagtaagaggcattaagttgaaaaacacagc
acaatatatatcctctaaatttcagtctgtttcagctaatttgggaagat
agttgtcttaataggactgataattactatagattttagtaataaacatt
tatagatttgatttagaaattatttcaaccatgtaatgctcataatttat
ttcttcaccaattcaaattcaggaccgaatgaaaggtctcttttgcttgg
gatttcttttctcatttacaaatatgctttatgatcccctggcttgtcaa
ttatttcctattcatcttgatttagtatatgcaatgaaactcaaactcta
tatgtgaaagcagccctttgatttccagtatttatcaatattatatagca
cattgaaacatttcagttacttatatatagatgactatcttatatttata
tcacaggttagatgttttacgaggaaaaatatctagaaattacttctttt
gaatgcatataatgaagaaaatgatatataatgattttagcccatttaat
gaatggcatgtctctctaaatgaaaccctcttgttttaactagtcaattt
taaacttacaaaaataaaaaaagacacacaattaaggctgatcaggtaat
aaacataagacacaagtaccctgaattgaggttgattacagtgaaatcct
gtagaggaatccccacgtattgatcaatgtagaagcccatgcacagcact
tagaaagataaagtaagcagggtcaggtaatcaaagcatttaaatagtaa
aaacagcagctgccactgtagactgctaaaataaatccataatacaaatt
gctttagtaaaaagcggatgagcagctgatcttcctattgaactctgata
ctgctcagtgaccacactgggaaaaggattgggagaaatgctttgcagat
caatattgagtgagatgttgcagagattcgtttgaatatgaaggcatcac
aggtgtgagagtacagacactgcagatgtgtcatgtgagaatgctcatgc
agttaaaatgctttctagcatgacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6111701_6112783
seq2: B6Ng01-186C20.g_65_1140

seq1  GAATTCAAACATGATGAAATAGTAAGAGGCATTAAGTTGAAAAACACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACATGATGAAATAGTAAGAGGCATTAAGTTGAAAAACACAGC  50

seq1  ACAATATATATCCTCTAAATTTCAGTCTGTTTCAGCTAATTTGGGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATATATCCTCTAAATTTCAGTCTGTTTCAGCTAATTTGGGAAGAT  100

seq1  AGTTGTCTTAATAGGACTGATAATTACTATAGATTTTAGTAATAAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCTTAATAGGACTGATAATTACTATAGATTTTAGTAATAAACATT  150

seq1  TATAGATTTGATTTAGAAATTATTTCAACCATGTAATGCTCATAATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTTGATTTAGAAATTATTTCAACCATGTAATGCTCATAATTTAT  200

seq1  TTCTTCACCAATTCAAATTCAGGACCGAATGAAAGGTCTCTTTTGCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACCAATTCAAATTCAGGACCGAATGAAAGGTCTCTTTTGCTTGG  250

seq1  GATTTCTTTTCTCATTTACAAATATGCTTTATGATCCCCTGGCTTGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTTCTCATTTACAAATATGCTTTATGATCCCCTGGCTTGTCAA  300

seq1  TTATTTCCTATTCATCTTGATTTAGTATATGCAATGAAACTCAAACTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTATTCATCTTGATTTAGTATATGCAATGAAACTCAAACTCTA  350

seq1  TATGTGAAAGCAGCCCTTTGATTTCCAGTATTTATCAATATTATATAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAAGCAGCCCTTTGATTTCCAGTATTTATCAATATTATATAGCA  400

seq1  CATTGAAACATTTCAGTTACTTATATATAGATGACTATCTTATATTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAACATTTCAGTTACTTATATATAGATGACTATCTTATATTTATA  450

seq1  TCACAGGTTAGATGTTTTACGAGGAAAAATATCTAGAAATTACTTCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGTTAGATGTTTTACGAGGAAAAATATCTAGAAATTACTTCTTTT  500

seq1  GAATGCATATAATGAAGAAAATGATATATAATGATTTTAGCCCATTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATATAATGAAGAAAATGATATATAATGATTTTAGCCCATTTAAT  550

seq1  GAATGGCATGTCTCTCTAAATGAAACCCTCTTGTTTTAACTAGTCAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCATGTCTCTCTAAATGAAACCCTCTTGTTTTAACTAGTCAATTT  600

seq1  TAAACTTACAAAAATAAAAAAAGACACACAATTAAGGCTGATCAGGTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTACAAAAATAAAAAAAGACACACAATTAAGGCTGATCAGGTAAT  650

seq1  AAACATAAGACACAAGTACCCTGAATTGAGGTTGATTACAGTGAAATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAAGACACAAGTACCCTGAATTGAGGTTGATTACAGTGAAATCCT  700

seq1  GTAGAGGAATCCCCACGTATTGATCAATGTAGAAGCCCATGCACAGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGAATCCCCACGTATTGATCAATGTAGAAGCCCATGCACAGCACT  750

seq1  TAGAAAGATAAAGTAAGCAGGGTCAGGTAATCAAAGCATTTAAATAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGATAAAGTAAGCAGGGTCAGGTAATCAAAGCATTTAAATAGTAA  800

seq1  AAACAGCAGCTGCCACTGTAGACTGCTAAAATAAATCCATAATACAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCAGCTGCCACTGTAGACTGCTAAAATAAATCCATAATACAAATT  850

seq1  GCTTTAGTAAAAAGCGGATGAGCAGCTGATCTTCCTATTGAACTCTGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTAAAAAGCGGATGAGCAGCTGATCTTCCTATTGAACTCTGATA  900

seq1  CTGCTCAGTGACCACACTGGGAAAAGGATTGGGAGAAATGCTTTGCAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGTGACCACACTGGGAAAAGGATTGGGAGAAATGCTTTGCAGAT  950

seq1  CAATATTGAGTGAGATGTTGCAGAGATTCGTTTTGAATATGAAGGCATCA  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAATATTGAGTGAGATGTTGCAGAGATTCG-TTTGAATATGAAGGCATCA  999

seq1  CAGGTGTGAGAGTACAGACACTGCAGATGTTGTCATGGTGAGAATGCTTC  1050
      ||||||||||||||||||||||||||||| |||||| |||||||||| ||
seq2  CAGGTGTGAGAGTACAGACACTGCAGATG-TGTCAT-GTGAGAATGC-TC  1046

seq1  ATGCAGTTAAAAATTGCTTTCTAAGCATGACGT  1083
      ||||||||||||  |||||||| ||||||||||
seq2  ATGCAGTTAAAA--TGCTTTCT-AGCATGACGT  1076