BAC Information

Click to search

BAC

Clone NameB6Ng01-188F10
Chromosome3 (Build37)
Map Location 75,050,692 - 75,051,896
singlet/doubletsinglet
Overlap geneSerpini2
Upstream geneLOC667434, LOC100041551, EG667459, BC050789
Downstream geneWdr49, Pdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188F10.bB6Ng01-188F10.g
ACCGA012662GA012663
length1,2021,188
definitionB6Ng01-188F10.b B6Ng01-188F10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctggtttcacatttatgttcagtgaggaagaacaccaaata
gtagattcaatttagtaaaagcaatgaaaaacgtcctattctcaatagta
atttcctgtccactctttacattacatgatctgttcttaaaatgcttcac
tttttaattctattccagacatgattgcccttcattgctctactgcaggc
tgtgagaatctcttctgagtttaaaactactgattacttattttgtatct
acattgcaagaattattctgtgatcctagaggatttaatatatatatatg
gaatttttattataaaacaaggaccagatatttgttttcttacaattatt
tattatgatgagctgaaatatttcagcttatgtagagtttgtccatgatg
tgggatatttcagtggtcagacagtgttttatagattaagcattttttac
acctatctcaggttctcttcaacttagttctgactcagtggatcagagta
agacctgagaatggcaatttctgtgtagttttgatgtgatgcccttccag
tccccatagtgcatttcttgtctcacagtaaactgaatcttatttcttgt
ctcacagtaaactgaatcttagtctcaatggtcctgtaaaatttagttca
gacccatggaaaattttatatatatatataaaatgaaaaacagtgaaata
gtaaaatataatcttacgaaaatgacatgaatgatactcttcttctatag
agaataatcatgacaattccatagaaagcaccagtggataaaagttcaca
tctaagctactgagaaaatcaaaaaaggaaattcaattttacttccattt
ccactttcagtgaatatttttttttgttccccttgttcttgaacaacccc
agagcacatcctttcaaagtcaggttctcaggctattctgggggcatgat
tcgtcgggatatctgctgactcctattatcatctcctaatgagatggaga
attctagcatacatgaaagacagttgtacaaaagccaaatggcttgagct
taaaacaggaacctgatattcagttcaaatttcagtcaattaacagcatg
accccaggcaagttgactgtacatctctgggctttcctccactaatttat
tagagaaatgtgtcgaactgagagcatcatctccagtattgggaaaatca
ga
gaattctcactgaggaataccgaatggcagagaagcacctgaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagca
gaggctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatcaatctggcggttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagaagccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagcaactggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaag
gaactcacataatatgtactcactgataagtggatactagcccaaaacct
aggatacccacgatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccatggaaggagttacagaaacaaagtatggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttactgaaag
gacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcacccta
taggtggacacattatgactaaccagtaccctgagctctgactctagctg
cattattgtattcaaaagatgcctagtcgtcatcactgtaaagaagaagt
catgacacgcagaacctttggtgtctggtacaggaacgtcacgtccaatg
ggggcaattgggtctgatcagagcacactcgactcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75050692_75051896
seq2: B6Ng01-188F10.b_48_1249

seq1  GAATTCATTCTGGTTTCACATTTATGTTCAGTGAGGAAGAACACCAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGGTTTCACATTTATGTTCAGTGAGGAAGAACACCAAATA  50

seq1  GTAGATTCAATTTAGTAAAAGCAATGAAAAACGTCCTATTCTCAATAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTCAATTTAGTAAAAGCAATGAAAAACGTCCTATTCTCAATAGTA  100

seq1  ATTTCCTGTCCACTCTTTACATTACATGATCTGTTCTTAAAATGCTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGTCCACTCTTTACATTACATGATCTGTTCTTAAAATGCTTCAC  150

seq1  TTTTTAATTCTATTCCAGACATGATTGCCCTTCATTGCTCTACTGCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTCTATTCCAGACATGATTGCCCTTCATTGCTCTACTGCAGGC  200

seq1  TGTGAGAATCTCTTCTGAGTTTAAAACTACTGATTACTTATTTTGTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAATCTCTTCTGAGTTTAAAACTACTGATTACTTATTTTGTATCT  250

seq1  ACATTGCAAGAATTATTCTGTGATCCTAGAGGATTTAATATATATATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCAAGAATTATTCTGTGATCCTAGAGGATTTAATATATATATATG  300

seq1  GAATTTTTATTATAAAACAAGGACCAGATATTTGTTTTCTTACAATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTATTATAAAACAAGGACCAGATATTTGTTTTCTTACAATTATT  350

seq1  TATTATGATGAGCTGAAATATTTCAGCTTATGTAGAGTTTGTCCATGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGATGAGCTGAAATATTTCAGCTTATGTAGAGTTTGTCCATGATG  400

seq1  TGGGATATTTCAGTGGTCAGACAGTGTTTTATAGATTAAGCATTTTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATATTTCAGTGGTCAGACAGTGTTTTATAGATTAAGCATTTTTTAC  450

seq1  ACCTATCTCAGGTTCTCTTCAACTTAGTTCTGACTCAGTGGATCAGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCTCAGGTTCTCTTCAACTTAGTTCTGACTCAGTGGATCAGAGTA  500

seq1  AGACCTGAGAATGGCAATTTCTGTGTAGTTTTGATGTGATGCCCTTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGAGAATGGCAATTTCTGTGTAGTTTTGATGTGATGCCCTTCCAG  550

seq1  TCCCCATAGTGCATTTCTTGTCTCACAGTAAACTGAATCTTATTTCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATAGTGCATTTCTTGTCTCACAGTAAACTGAATCTTATTTCTTGT  600

seq1  CTCACAGTAAACTGAATCTTAGTCTCAATGGTCCTGTAAAATTTAGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTAAACTGAATCTTAGTCTCAATGGTCCTGTAAAATTTAGTTCA  650

seq1  GACCCATGGAAAATTTTATATATATATATAAAATGAAAAACAGTGAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATGGAAAATTTTATATATATATATAAAATGAAAAACAGTGAAATA  700

seq1  GTAAAATATAATCTTACGAAAATGACATGAATGATACTCTTCTTCTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATATAATCTTACGAAAATGACATGAATGATACTCTTCTTCTATAG  750

seq1  AGAATAATCATGACAATTCCATAGAAAGCACCAGTGGATAAAAGTTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATCATGACAATTCCATAGAAAGCACCAGTGGATAAAAGTTCACA  800

seq1  TCTAAGCTACTGAGAAAATCAAAAAAGGAAATTCAATTTTACTTCCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTACTGAGAAAATCAAAAAAGGAAATTCAATTTTACTTCCATTT  850

seq1  CCACTTTCAGTGAATA-TTTTTTTTGTTCCCCTTGTTCTTGAACAACCCC  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCACTTTCAGTGAATATTTTTTTTTGTTCCCCTTGTTCTTGAACAACCCC  900

seq1  AGAGCACATCC-TTCAAAGTCAGGTTCTCAGGCTATTCTGGGGGCATGAT  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATCCTTTCAAAGTCAGGTTCTCAGGCTATTCTGGGGGCATGAT  950

seq1  TCGTCGGGATATCTGCTGACTCCTATTATCATCTCCTAATGAGATGGAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCGGGATATCTGCTGACTCCTATTATCATCTCCTAATGAGATGGAGA  1000

seq1  ATTCTAGCATACAATGAAAGACAG-TGTACAAAAGCCAAATGGCTTTGAG  1047
      |||||||||||| ||||||||||| ||||||||||||||||||| |||||
seq2  ATTCTAGCATAC-ATGAAAGACAGTTGTACAAAAGCCAAATGGC-TTGAG  1048

seq1  CTTAAAACCAGGGAACCTGATA-TCAGTTCAAA-TTCAGTCAATTAACAG  1095
      ||||||||   ||||||||||| |||||||||| ||||||||||||||||
seq2  CTTAAAAC--AGGAACCTGATATTCAGTTCAAATTTCAGTCAATTAACAG  1096

seq1  CATGACCCCAGGCAAG-TGACTGTACATCTCTGGGGCTTTTCCTCCACTA  1144
      |||||||||||||||| ||||||||||||||||||   ||||||||||||
seq2  CATGACCCCAGGCAAGTTGACTGTACATCTCTGGG--CTTTCCTCCACTA  1144

seq1  ATATAATTAGAGAATTGTTCAGAAACTGAAGAGAATTCA--TTCAGTATA  1192
      || | ||||||||| |||   | ||||| |||| | |||  | |||||| 
seq2  AT-TTATTAGAGAAATGTGTCG-AACTG-AGAGCA-TCATCTCCAGTAT-  1189

seq1  TTGGAAAATCAGA  1205
      | |||||||||||
seq2  TGGGAAAATCAGA  1202