BAC Information

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BAC

Clone NameB6Ng01-189E11
Chromosome3 (Build37)
Map Location 48,302,617 - 48,472,281
singlet/doubletdoublet
Overlap gene1700018B24Rik
Upstream geneLOC100039426, LOC666202, LOC666208
Downstream geneLOC100039404, EG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189E11.bB6Ng01-189E11.g
ACCGA013344GA013345
length5051,108
definitionB6Ng01-189E11.b B6Ng01-189E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,302,617 - 48,303,127)(48,471,174 - 48,472,281)
sequence
atgaatgaaagacacacacacatacacacacacacacacacacacacaca
aacattacgatgctctcagtgttgttgacgatcactctgctgccctctga
gtgattcttgttgagcgccatagtctctagctgagtagtactccattgta
taaatgtacaactgtttttgtatccattcctctgttgaagaacatctgga
ttctttccagctccttcctattataaacaaggctactgttaacatagtgg
agcatgtgtccttattacatgttgcagcatcttctgggtatatgcccagg
agtggtatagctgggtcctcgggtagtattatgtccaattttctgaggaa
ccaccaaactgatttccagaagtgttgtaccagattgtaatcgcaccaac
aatggaggagtgttcctctttctccacatctttgccagcatcttctgtca
ccagagtttgttttgtttttgttgttgttgttgttgttgttgttgttgtt
ttggt

gaattcatgtaaaatattttctgcatatttatcttttccttttaatcttt
tagtatttttgtttttataatctcacagttaattgttctgggctgattta
tctttccttaccctggtacaagacttttatcttgtgtttactttgttctc
atattatttatttacctactttcttcttatcacctcaggctttgctttaa
ttatttccctttatgttatctatttttcattttactttttaattttgtat
tatctttcttctgccttatctttacctttgctttattttaatatagcaaa
ttctgtgcccaaagcccaagggaggggatgcaagcagcaagaggctcact
ggaatttgaagtgtttgtttcccccccccccccacttcagtctgcccgta
tcttcctgtctctcaggacaaagttctatctctatatcctctatatagag
gatgtctccatatcctcctattaggatgtcagggtagtatttaatgaaag
gcacagtccttgtgttgaatttaagtcacacaagagctgtattcttcggc
tactttgcacggaagctttccgttctacatttataactttcaaatagatg
tattcacaagcagtgaattatacttactttgccctagttcactaatacag
gactggcatatgaatagcacttaatttgtttctacagggttagctatctg
gattctgtttgaaccatttcctaaatctagaagtattctgcactaaccta
gtgatattcatctcctcatctatcattggaactggagttttagggtcaag
aaaaagactggcagtccaaataagataggctcagatgctcaccatcaata
gatcacttaaagatacacataatttcccactaatgctaatttcaattcat
attttaaacatagactttaacactattccgtgttaattaactgtcctagc
tttctggtctcaaaattgtctattttccagactgaaatagctgaaatact
aaacagttatttttaaaatatttattttttgtggtgttatgggagttttc
tgattgcaatttctgtgtagtacatgcatgcagtgctcatgggaggtaga
ctttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_48302617_48303127
seq2: B6Ng01-189E11.b_42_552

seq1  GAATTCATGAATGAAAGACACACACACATACACACACACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAATGAAAGACACACACACATACACACACACACACACACACA  50

seq1  CACACAAACATTACGATGCTCTCAGTGTTGTTGACGATCACTCTGCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAACATTACGATGCTCTCAGTGTTGTTGACGATCACTCTGCTGCC  100

seq1  CTCTGAGTGATTCTTGTTGAGCGCCATAGTCTCTAGCTGAGTAGTACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTGATTCTTGTTGAGCGCCATAGTCTCTAGCTGAGTAGTACTCC  150

seq1  ATTGTATAAATGTACAACTGTTTTTGTATCCATTCCTCTGTTGAAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATAAATGTACAACTGTTTTTGTATCCATTCCTCTGTTGAAGAACA  200

seq1  TCTGGATTCTTTCCAGCTCCTTCCTATTATAAACAAGGCTACTGTTAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTCTTTCCAGCTCCTTCCTATTATAAACAAGGCTACTGTTAACA  250

seq1  TAGTGGAGCATGTGTCCTTATTACATGTTGCAGCATCTTCTGGGTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGAGCATGTGTCCTTATTACATGTTGCAGCATCTTCTGGGTATATG  300

seq1  CCCAGGAGTGGTATAGCTGGGTCCTCGGGTAGTATTATGTCCAATTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAGTGGTATAGCTGGGTCCTCGGGTAGTATTATGTCCAATTTTCT  350

seq1  GAGGAACCACCAAACTGATTTCCAGAAGTGTTGTACCAGATTGTAATCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACCACCAAACTGATTTCCAGAAGTGTTGTACCAGATTGTAATCGC  400

seq1  ACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCTTTGCCAGCATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCTTTGCCAGCATCTT  450

seq1  CTGTCACCAGAGTTTGTTTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACCAGAGTTTGTTTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTT  500

seq1  GTTGTTTTGGT  511
      |||||||||||
seq2  GTTGTTTTGGT  511


seq1: chr3_48471174_48472281
seq2: B6Ng01-189E11.g_64_1171 (reverse)

seq1  TCAGAAAATCTACCT-CCATGAGCACTGCATGCATGTACTACACAGAAA-  48
      ||||||| ||||||| ||||||||||||||||||||||||||||||||| 
seq2  TCAGAAAGTCTACCTCCCATGAGCACTGCATGCATGTACTACACAGAAAT  50

seq1  TGCATTCAGAAAAACTCCCAT-ACA-CACAAAAAATAAATATTTTTAAAA  96
      |||| |||| ||||||||||| ||| ||||||||||||||| ||||||||
seq2  TGCAATCAG-AAAACTCCCATAACACCACAAAAAATAAATA-TTTTAAAA  98

seq1  ATAACTTGGTTTTAGTATTTCAGCTATTTCAGTCTGGAAAATAGACAATT  146
      ||||||    ||||||||||||||||||||||||||||||||||||||||
seq2  ATAACT---GTTTAGTATTTCAGCTATTTCAGTCTGGAAAATAGACAATT  145

seq1  TTGAGACCAGAAAGCTAGGACAGTTAATTAACACGGAATAGTGTTAAAGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACCAGAAAGCTAGGACAGTTAATTAACACGGAATAGTGTTAAAGT  195

seq1  CTATGTTTAAAATATGAATTGAAATTAGCATTAGTGGGAAATTATGTGTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTAAAATATGAATTGAAATTAGCATTAGTGGGAAATTATGTGTA  245

seq1  TCTTTAAGTGATCTATTGATGGTGAGCATCTGAGCCTATCTTATTTGGAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGTGATCTATTGATGGTGAGCATCTGAGCCTATCTTATTTGGAC  295

seq1  TGCCAGTC-TTTTCTTGACCCTAAAACTCCAGTTCCAATGATAGATGAGG  345
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTCTTTTTCTTGACCCTAAAACTCCAGTTCCAATGATAGATGAGG  345

seq1  AGATGAATATCACTAGGTTAGTGCAGAATACTTCTAGATTTAGGAAATGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATATCACTAGGTTAGTGCAGAATACTTCTAGATTTAGGAAATGG  395

seq1  TTCAAACAGAATCCAGATAGCTAACCCTGTAGAAACAAATTAAGTGCTAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAGAATCCAGATAGCTAACCCTGTAGAAACAAATTAAGTGCTAT  445

seq1  TCATATGCCAGTCCTGTATTAGTGAACTAGGGCAAAGTAAGTATAATTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGCCAGTCCTGTATTAGTGAACTAGGGCAAAGTAAGTATAATTCA  495

seq1  CTGCTTGTGAATACATCTATTTGAAAGTTATAAATGTAGAACGGAAAGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTGAATACATCTATTTGAAAGTTATAAATGTAGAACGGAAAGCT  545

seq1  TCCGTGCAAAGTAGCCGAAGAATACAGCTCTTGTGTGACTTAAATTCAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGCAAAGTAGCCGAAGAATACAGCTCTTGTGTGACTTAAATTCAAC  595

seq1  ACAAGGACTGTGCCTTTCATTAAATACTACCCTGACATCCTAATAGGAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGACTGTGCCTTTCATTAAATACTACCCTGACATCCTAATAGGAGG  645

seq1  ATATGGAGACATCCTCTATATAGAGGATATAGAGATAGAACTTTGTCCTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGACATCCTCTATATAGAGGATATAGAGATAGAACTTTGTCCTG  695

seq1  AGAGACAGGAAGATACGGGCAGACTGAAGTGGGGGGGGGGGGGAAACAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGAAGATACGGGCAGACTGAAGTGGGGGGGGGGGGGAAACAAA  745

seq1  CACTTCAAATTCCAGTGAGCCTCTTGCTGCTTGCATCCCCTCCCTTGGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAATTCCAGTGAGCCTCTTGCTGCTTGCATCCCCTCCCTTGGGC  795

seq1  TTTGGGCACAGAATTTGCTATATTAAAATAAAGCAAAGGTAAAGATAAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCACAGAATTTGCTATATTAAAATAAAGCAAAGGTAAAGATAAGG  845

seq1  CAGAAGAAAGATAATACAAAATTAAAAAGTAAAATGAAAAATAGATAACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAAGATAATACAAAATTAAAAAGTAAAATGAAAAATAGATAACA  895

seq1  TAAAGGGAAATAATTAAAGCAAAGCCTGAGGTGATAAGAAGAAAGTAGGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGAAATAATTAAAGCAAAGCCTGAGGTGATAAGAAGAAAGTAGGT  945

seq1  AAATAAATAATATGAGAACAAAGTAAACACAAGATAAAAGTCTTGTACCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAATATGAGAACAAAGTAAACACAAGATAAAAGTCTTGTACCA  995

seq1  GGGTAAGGAAAGATAAATCAGCCCAGAACAATTAACTGTGAGATTATAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGGAAAGATAAATCAGCCCAGAACAATTAACTGTGAGATTATAAA  1045

seq1  AACAAAAATACTAAAAGATTAAAAGGAAAAGATAAATATGCAGAAAATAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATACTAAAAGATTAAAAGGAAAAGATAAATATGCAGAAAATAT  1095

seq1  TTTACATGAATTC  1108
      |||||||||||||
seq2  TTTACATGAATTC  1108


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