BAC Information

Click to search

BAC

Clone NameB6Ng01-192I07
Chromosome3 (Build37)
Map Location 136,669,460 - 136,670,581
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383923, Bank1, LOC100039477, LOC668868, Ppp3ca, LOC668870
Downstream geneLOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192I07.bB6Ng01-192I07.g
ACCGA015738GA015739
length1,2411,134
definitionB6Ng01-192I07.b B6Ng01-192I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtaccatacattaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaggatggaagcaatcccactaga
atcagggactaggcaaggctgcccactttctccctacttattcaatatag
ttcttgaagtcctagccagaacaatttgacaacaaaaggtgatcaagggg
attcaaattggaaaagaagaagtcaaaatatcactatttgcagatgatat
gagaatatatataagtgaccctaaaagttccaccagagaactcctaaacc
tgataaacagctttagtgcagtaggtggatataaaattaactcaaccaaa
taagtggcctttctctacacaaaggataaacagaatgagaaagaaattag
ggaaacaacacccttcacaatagtcacaaaaaaatataaaatgccttggt
gtgattctaactaaggaagtgaaagatctgtatgacaagaacttcaagtc
tctgaagaaaggaattgaagatctcagaagatggaaagatctcccatgct
catggattggcaggattaatgtagtctaaatggctgtcctgccgaaagca
atctacagattcaatgcaatccccatcaaaattccagctcacttcttcac
tgagttcgaaagggtaatttgcaaattcatctggaataacaaaaaaccta
ggatagcagaaactattctcaacaataaaagaacctctgggagaaatcac
catgcctgacctcaagctgtactacagagcatttgtgataaaaactgcat
ggcactcgtacagcgacagacaggtagatcaatggaatagaattgaagac
ccagaaatgaacccacacacctatggtcacttgatctttgacaagggagc
taaaaccatccagtggaaaaaagacagcatttcaacaaatgttgctggca
caactggcagtaatcatgtagaagaatgcgaattgatccattcccatctc
cttgtacaaagctcaagtcaaagtgatcaaagaactcctcataaaaccag
agacactgaaatttatagaggagaaactggggaaaagcctcaaagataat
aggcacatgaagaaaattcctaaacagagcaggcaattgctgtgcttgta
gaattcaaagaaattgtataaatggacctataaattggccaaagcttctg
caaggtcaaaggatatcctggtccgattagagaccaaaatc
gaattcatcaggatggacctatagttgaggatctcccaattcctgggatc
tacagagatattgttaaccctattcatggaggactacacaatctcagttt
ttcttccatgattgttttatacattccccagcccacaagggtagaggagg
cagaagcagtgaacagggttcagatgactgtaagtatgatggaaggactt
acagagacagcttcagtgagacagctctcttttattgttccaggggtagg
gtacataagggctcttaaggtatgggtagagagggttgctgattggtcat
agcacagcacctaattgtcacatggaaagctagagcaggtcttgtgtggt
gagtcatgaatcccttgcagagagcagtgctcagggtcattctgcagaca
aggtcagacacctgtgctcagatacactctccaaccagcgcctggctcag
ggctatctagatatgctggtctgtgaccttaatagcaggtgctccaacat
ctctccctattttattttataatggagaagtattatcatgagtctgtaga
gccacataacttaaatcagaggggtccaaggcctgatagtagacaattac
ctggttggtggtcattctagcaatggtggaaatctgccatgagagaaact
atttgagacagggggcaagcgtcaaaataaaacatagcatagctggagag
ttaatgaggagtaagagccaagaaaagcagaagttattaaaccaatgtaa
ttgttcagtgggctgaaatcttgagaagaggtgtttatgaagttgcttga
gggttttaacattgctctcaacaatatttgattcatttacatgaaagcaa
cattcttctcccaatacatgtgcaagccctctccatgttcagcagttata
ggcatagtgttctccttgtttttccagcatgaccctggcaagagagttca
tctgatgccatgggtatgatgggaaggacttacggacacagctttcagtg
gaggaccaccaatcttttatttttcagggggtgggagattatatggctct
gaaaggttacagtgggagaagggcttgagtgataaaaccacagcaactta
ttatcaatagtgggcaggaatggccaagttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_136669460_136670581
seq2: B6Ng01-192I07.g_68_1201

seq1  GAATTCATCAGGATGGACCTATAGTTGAGGATCTCCCAATTCCTGGGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGGATGGACCTATAGTTGAGGATCTCCCAATTCCTGGGATC  50

seq1  TACAGAGATATTGTTAACCCTATTCATGGAGGACTACACAATCTCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGATATTGTTAACCCTATTCATGGAGGACTACACAATCTCAGTTT  100

seq1  TTCTTCCATGATTGTTTTATACATTCCCCAGCCCACAAGGGTAGAGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCATGATTGTTTTATACATTCCCCAGCCCACAAGGGTAGAGGAGG  150

seq1  CAGAAGCAGTGAACAGGGTTCAGATGACTGTAAGTATGATGGAAGGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAGTGAACAGGGTTCAGATGACTGTAAGTATGATGGAAGGACTT  200

seq1  ACAGAGACAGCTTCAGTGAGACAGCTCTCTTTTATTGTTCCAGGGGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAGCTTCAGTGAGACAGCTCTCTTTTATTGTTCCAGGGGTAGG  250

seq1  GTACATAAGGGCTCTTAAGGTATGGGTAGAGAGGGTTGCTGATTGGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATAAGGGCTCTTAAGGTATGGGTAGAGAGGGTTGCTGATTGGTCAT  300

seq1  AGCACAGCACCTAATTGTCACATGGAAAGCTAGAGCAGGTCTTGTGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGCACCTAATTGTCACATGGAAAGCTAGAGCAGGTCTTGTGTGGT  350

seq1  GAGTCATGAATCCCTTGCAGAGAGCAGTGCTCAGGGTCATTCTGCAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGAATCCCTTGCAGAGAGCAGTGCTCAGGGTCATTCTGCAGACA  400

seq1  AGGTCAGACACCTGTGCTCAGATACACTCTCCAACCAGCGCCTGGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGACACCTGTGCTCAGATACACTCTCCAACCAGCGCCTGGCTCAG  450

seq1  GGCTATCTAGATATGCTGGTCTGTGACCTTAATAGCAGGTGCTCCAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCTAGATATGCTGGTCTGTGACCTTAATAGCAGGTGCTCCAACAT  500

seq1  CTCTCCCTATTTTATTTTATAATGGAGAAGTATTATCATGAGTCTGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTATTTTATTTTATAATGGAGAAGTATTATCATGAGTCTGTAGA  550

seq1  GCCACATAACTTAAATCAGAGGGGTCCAAGGCCTGATAGTAGACAATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATAACTTAAATCAGAGGGGTCCAAGGCCTGATAGTAGACAATTAC  600

seq1  CTGGTTGGTGGTCATTCTAGCAATGGTGGAAATCTGCCATGAGAGAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGGTGGTCATTCTAGCAATGGTGGAAATCTGCCATGAGAGAAACT  650

seq1  ATTTGAGACAGGGGGCAAGCGTCAAAATAAAACATAGCATAGCTGGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGACAGGGGGCAAGCGTCAAAATAAAACATAGCATAGCTGGAGAG  700

seq1  TTAATGAGGAGTAAGAGCCAAGAAAAGCAGAAGTTATTAAACCAATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAGGAGTAAGAGCCAAGAAAAGCAGAAGTTATTAAACCAATGTAA  750

seq1  TTGTTCAGTGGGCTGAAATCTTGAGAAGAGGTGTTTATGAAGTTGCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGTGGGCTGAAATCTTGAGAAGAGGTGTTTATGAAGTTGCTTGA  800

seq1  GGGTTTTAACATTGCTCTCAACAATATTTGATTCATTTACATGAAAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTAACATTGCTCTCAACAATATTTGATTCATTTACATGAAAGCAA  850

seq1  CATTCTTCTCCCAATACA-ATGCAAGCCCTC-CCATGTTCAGCAGTTATT  898
      ||||||||||||||||||  ||||||||||| |||||||||||||||| |
seq2  CATTCTTCTCCCAATACATGTGCAAGCCCTCTCCATGTTCAGCAGTTA-T  899

seq1  AGGCATAGTGTTCTCCT--GTTTTCCAGCATGACCCTGGCAAGAGAGTTC  946
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  AGGCATAGTGTTCTCCTTGTTTTTCCAGCATGACCCTGGCAAGAGAGTTC  949

seq1  ATCTGATGCCATGGGTATGAT-GGAAGGACTTACGGACACAGC-TTCAGT  994
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  ATCTGATGCCATGGGTATGATGGGAAGGACTTACGGACACAGCTTTCAGT  999

seq1  -GAG--ACACCAATCTTTTATTTTTCCGGGGGTGGG-GTTTATAATGGCT  1040
       |||   ||||||||||||||||||| ||||||||| | |||| ||||||
seq2  GGAGGACCACCAATCTTTTATTTTTCAGGGGGTGGGAGATTAT-ATGGCT  1048

seq1  CTTAGAGG-TACAGTGGGAG-AGGGC-TGAGTGGTTATAACACAGCACCT  1087
      || | ||| ||||||||||| ||||| |||||| | | | ||||||| ||
seq2  CTGAAAGGTTACAGTGGGAGAAGGGCTTGAGTGATAAAACCACAGCAACT  1098

seq1  AATTATC-ATAGT-GGCAGGAATGGCCAAGTCTCTCT  1122
       |||||| ||||| ||||||||||||||||| |||||
seq2  TATTATCAATAGTGGGCAGGAATGGCCAAGT-TCTCT  1134