BAC Information

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BAC

Clone NameB6Ng01-192P17
Chromosome3 (Build37)
Map Location 91,516,739 - 91,517,599
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
Downstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192P17.bB6Ng01-192P17.g
ACCGA016080GA016081
length940876
definitionB6Ng01-192P17.b B6Ng01-192P17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacagagtactaccggaggatccaccaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggtcacatgctccactat
gttcatagcagccttatttataataaccagaagcttgaaagaacctagat
gcccctcaacagaagaatggatacagaaaatgtggtacatctacacaatg
gagtactactcaggtattaaaaagaatgaatgtatgaaattcctagccaa
gtcgatggacctggagtgcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacattatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgttgctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatca
gaattctcttcttctaggtgttactgctctataagacagacaatcccaga
cagtctttgatgaaatatctcattacttctttctttgaggatagtgtctt
atacacatttagaggtgttttagtgtggaaaagaagacactttctagttc
cttagtctttgctattatggatacctcatcttcataagcaggacctttgg
gtgttgtcacaatcctctccatgggatggtgtaagtaaatgttccatgac
atgaaaggggtcagaagtagattaaatgtcaaagattcttagatattatg
gagattgatgaaccaaactgatcttaacaagttttggtttgtttttgatt
gtatgttttgttttgtcttgttttggatatttgagacagtgtttctctgt
gtagccctggctgtcctggaactcactttgtagaccaggctggactcaaa
ctcagaaatccacctccctctccctctcaagtgctaggattaaaggtgtg
tgctgaatcccttccggtctggccagtactgggatagctagggcgcagag
taggctgacaccctccagctaaccacaagacctgccacgggatcttaaga
cctctggtgagtggcacactgcatctggtccaatccaatcgcatgggacc
tgaaactgcattagttagggaagcaaaaatcccagtctgatcaggggcaa
aagtcccgtctggtaaatgccatcacagggggattttgggcgtggagtcc
gtggacaactgtaaggtatacacaggacgctccacgggatctgaagacct
cttgtgagtggatcacaaactctgccaggagacaggttcgaataccagat
tattggggtaccttccctgcaagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91516739_91517599
seq2: B6Ng01-192P17.g_63_925

seq1  GAATTCTCTTCTTCTAGGTGTTACTGCTCTATAAGACAGACAATCCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTTCTAGGTGTTACTGCTCTATAAGACAGACAATCCCAGA  50

seq1  CAGTCTTTGATGAAATATCTCATTACTTCTTTCTTTGAGGATAGTGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTGATGAAATATCTCATTACTTCTTTCTTTGAGGATAGTGTCTT  100

seq1  ATACACATTTAGAGGTGTTTTAGTGTGGAAAAGAAGACACTTTCTAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATTTAGAGGTGTTTTAGTGTGGAAAAGAAGACACTTTCTAGTTC  150

seq1  CTTAGTCTTTGCTATTATGGATACCTCATCTTCATAAGCAGGACCTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTTTGCTATTATGGATACCTCATCTTCATAAGCAGGACCTTTGG  200

seq1  GTGTTGTCACAATCCTCTCCATGGGATGGTGTAAGTAAATGTTCCATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCACAATCCTCTCCATGGGATGGTGTAAGTAAATGTTCCATGAC  250

seq1  ATGAAAGGGGTCAGAAGTAGATTAAATGTCAAAGATTCTTAGATATTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGGGTCAGAAGTAGATTAAATGTCAAAGATTCTTAGATATTATG  300

seq1  GAGATTGATGAACCAAACTGATCTTAACAAGTTTTGGTTTGTTTTTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGATGAACCAAACTGATCTTAACAAGTTTTGGTTTGTTTTTGATT  350

seq1  GTATGTTTTGTTTTGTCTTGTTTTGGATATTTGAGACAGTGTTTCTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTTGTTTTGTCTTGTTTTGGATATTTGAGACAGTGTTTCTCTGT  400

seq1  GTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGACTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGACTCAAA  450

seq1  CTCAGAAATCCACCTCCCTCTCCCTCTCAAGTGCTAGGATTAAAGGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCCACCTCCCTCTCCCTCTCAAGTGCTAGGATTAAAGGTGTG  500

seq1  TGCTGAATCCCTTCCGGTCTGGCCAGTACTGGGATAGCTAGGGCGCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATCCCTTCCGGTCTGGCCAGTACTGGGATAGCTAGGGCGCAGAG  550

seq1  TAGGCTGACACCCTCCAGCTAACCACAAGACCTGCCACGGGATCTTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGACACCCTCCAGCTAACCACAAGACCTGCCACGGGATCTTAAGA  600

seq1  CCTCTGGTGAGTGGCACACTGCATCTGGTCCAATCCAATCGCATGGGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTGAGTGGCACACTGCATCTGGTCCAATCCAATCGCATGGGACC  650

seq1  TGAAACTGCATTAGTTAGGGAAGCAAAAATCCCAGTCTGATCAGGGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGCATTAGTTAGGGAAGCAAAAATCCCAGTCTGATCAGGGGCAA  700

seq1  AAGTCCCGTCTGGTAAATGCCATCACAGGGGGATTTTGGGCGTGGAGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCGTCTGGTAAATGCCATCACAGGGGGATTTTGGGCGTGGAGTCC  750

seq1  GTGGACAACTGTAAGGTATACACAGGACGCTCCACGGGATCTGAAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAACTGTAAGGTATACACAGGACGCTCCACGGGATCTGAAGACCT  800

seq1  C-TGTGAGTGGATCACAAACTCTGCCAGGAGACAGGTTCGAATACCAGA-  848
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTGTGAGTGGATCACAAACTCTGCCAGGAGACAGGTTCGAATACCAGAT  850

seq1  TATTGGGGTACCT  861
      |||||||||||||
seq2  TATTGGGGTACCT  863