BAC Information

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BAC

Clone NameB6Ng01-194I10
Chromosome3 (Build37)
Map Location 75,872,202 - 75,873,384
singlet/doubletsinglet
Overlap genenone
Upstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1, Golph4
Downstream geneFstl5, LOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194I10.bB6Ng01-194I10.g
ACCGA017198GA017199
length1,2011,175
definitionB6Ng01-194I10.b B6Ng01-194I10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctccattccagtagaaatattcaccaaaaagaactataacttag
cataggacacagaatctaaaggaagattcatgaattccatgaatttatgg
agttttaaaaatcactctttctttgcccgctcttgggagtcttttcctta
tatcggattcctttgttcagcctcaatatgagtgcttttgccttgtcata
ttataccttcttttgtcctgtgtgactggtatctcttagagaactactct
tctctgaagaggaaatggaggggaaatgtctgagggagagaagatttact
tggggagctagaagaagcagaaggtaaagaaactatggtttagatgtatt
tttagagatgaatttatttccaatcacaaaaagaagtcttaaagaaaaaa
gttgattaatttaaagaaaatgaatatgaactgcctaaatgatattcaaa
aatccctaatatcaggcttttggatgtgatgaaggcattctagaatgaga
aaatcaaattcaataaagagatagaaacaatgaagagagctaaagctgag
gttagaactataagatactaataaatcaactagaaacagcaagggaaaga
cttacaagtataatgaagtgagaagaaggtagactatcaggactagaaga
taaagtagagggtctagacaaaatagtcaaatactatgaaaggaaaagag
ggagggtaagctgtggttaggatctattttatgagaataatctattttca
ataaaaattttaaaaaagaacaaattttataacacagtaaaagaacatgc
aagaaatgccaggcaaaatttccaattataggcatggataaaagagaaga
atctcaattaagggcaaagataagatcatcaacaagacagaataaagctt
tcacaaaacaatgcaaacctatacaaataaagaatcacacagaacaccaa
atagacaagaccaagttagaaactcactatggcaataccatagttaaata
gagacagagaagagtaatattgaagctagagttgtagaaaaaggagaacc
acataaaataacagctgttgtcagaacttcaaatctacataattgggtca
gacttcagccctaacatactaggaatatgctacgaaaactactgctagtg
aagtcaagaagattcataaataagcaggcctctagagactgatatactgc
a

gaattctttcctgaaattctgtttattaaagtcaaagaagaaagaaaagg
gaaatattgcaaaattgatttttaaaaaggcaataaaggcagcaatctat
ctgattatttccaatttcataaatgagaccaacagtgttgttattatgct
gcacaaacataattgtagaagtaattttcatgactgcagatgaggctgaa
tcgcacaatatttattgaattagttgctttgttttggtgtttctcagtag
taatattatctcattgttttataaatgcaactactagagtttacacaaaa
acatgataagatatgagatcttaattgcagatcttgatttatgtataaca
actagcattttacataaacattattcatgtatatttgcattcatatacat
ctagcaaaatagaactgtgttttcttttctccacatttaatttattttaa
atttaacctcagaagtttttaatactaagaaaatggctaaatgatgtgca
tctgtgcttttgtacatattcagtgttttgttaataaagcaatctcaaaa
ttcaaagatatacagacataaaaataatttaaattgctattgttattata
catgctatgaagacatttctttaattaattaggcccatctacatattcca
tttaacagagaaatgaattataaatctatctgtatgtgcttgagagtcct
ttatgacatatggacatagaccaactatcatgaggtgcttgtttccattg
ctgctgtctggtttggcaaaagcaagtactgtttaccttgctcaacacaa
tcagtgaagccctgcctgcagaagctcaggatcgcgcctgttggaagcta
ggtagagcaagaagatcaggcatgcagttaattattctacttatcttgag
gaagtatacttctgtatagttctcctgttgattgcccgtataagccaacg
agtgcaatcttttgtggtcttttgaatggctcaccatagggtttaattct
ggagtttgcttcacccccgaatgttgatgagcatgaataaatttatttag
tgaagctcagtctgatatctcattaatgtggatagcttttagcatgcagg
tagccagccatcagtataatatgttctgaatccttttctgttaatgactt
atgtacgactgatgccgtgtttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75872202_75873384
seq2: B6Ng01-194I10.g_65_1239

seq1  GAATTCTTTCCTGAAATTCTGTTTATTAAAGTCAAAGAAGAAAGAAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGAAATTCTGTTTATTAAAGTCAAAGAAGAAAGAAAAGG  50

seq1  GAAATATTGCAAAATTGATTTTTAAAAAGGCAATAAAGGCAGCAATCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTGCAAAATTGATTTTTAAAAAGGCAATAAAGGCAGCAATCTAT  100

seq1  CTGATTATTTCCAATTTCATAAATGAGACCAACAGTGTTGTTATTATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATTTCCAATTTCATAAATGAGACCAACAGTGTTGTTATTATGCT  150

seq1  GCACAAACATAATTGTAGAAGTAATTTTCATGACTGCAGATGAGGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAACATAATTGTAGAAGTAATTTTCATGACTGCAGATGAGGCTGAA  200

seq1  TCGCACAATATTTATTGAATTAGTTGCTTTGTTTTGGTGTTTCTCAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCACAATATTTATTGAATTAGTTGCTTTGTTTTGGTGTTTCTCAGTAG  250

seq1  TAATATTATCTCATTGTTTTATAAATGCAACTACTAGAGTTTACACAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTATCTCATTGTTTTATAAATGCAACTACTAGAGTTTACACAAAA  300

seq1  ACATGATAAGATATGAGATCTTAATTGCAGATCTTGATTTATGTATAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATAAGATATGAGATCTTAATTGCAGATCTTGATTTATGTATAACA  350

seq1  ACTAGCATTTTACATAAACATTATTCATGTATATTTGCATTCATATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCATTTTACATAAACATTATTCATGTATATTTGCATTCATATACAT  400

seq1  CTAGCAAAATAGAACTGTGTTTTCTTTTCTCCACATTTAATTTATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAAATAGAACTGTGTTTTCTTTTCTCCACATTTAATTTATTTTAA  450

seq1  ATTTAACCTCAGAAGTTTTTAATACTAAGAAAATGGCTAAATGATGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACCTCAGAAGTTTTTAATACTAAGAAAATGGCTAAATGATGTGCA  500

seq1  TCTGTGCTTTTGTACATATTCAGTGTTTTGTTAATAAAGCAATCTCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTTTTGTACATATTCAGTGTTTTGTTAATAAAGCAATCTCAAAA  550

seq1  TTCAAAGATATACAGACATAAAAATAATTTAAATTGCTATTGTTATTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGATATACAGACATAAAAATAATTTAAATTGCTATTGTTATTATA  600

seq1  CATGCTATGAAGACATTTCTTTAATTAATTAGGCCCATCTACATATTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATGAAGACATTTCTTTAATTAATTAGGCCCATCTACATATTCCA  650

seq1  TTTAACAGAGAAATGAATTATAAATCTATCTGTATGTGCTTGAGAGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGAGAAATGAATTATAAATCTATCTGTATGTGCTTGAGAGTCCT  700

seq1  TTATGACATATGGACATAGACCAACTATCATGAGGTGCTTGTTTCCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACATATGGACATAGACCAACTATCATGAGGTGCTTGTTTCCATTG  750

seq1  CTGCTGTCTGGTTTGGCAAAAGCAAGTACTGTTTACCTTGCTCAAACACA  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCTGTCTGGTTTGGCAAAAGCAAGTACTGTTTACCTTGCTC-AACACA  799

seq1  ATCAGTGAAGCCCTGCCTGCAGAAGCTCAGGATCGCGCCTGTTGGAAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGAAGCCCTGCCTGCAGAAGCTCAGGATCGCGCCTGTTGGAAGCT  849

seq1  AGGTAGAGCAAGAAGATCAAGGCATGCAGTTAATTA-TCTACTTATCTTG  899
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  AGGTAGAGCAAGAAGATC-AGGCATGCAGTTAATTATTCTACTTATCTTG  898

seq1  AGGAAAGTATACTTCTGTATAGTTCTCCTGTTGATTGCCCGTATAAGCCA  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGG-AAGTATACTTCTGTATAGTTCTCCTGTTGATTGCCCGTATAAGCCA  947

seq1  ACGAGTGCAATCTTTTGTGGTCTTTTGAATGGCTCACCATAGGGTTTAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTGCAATCTTTTGTGGTCTTTTGAATGGCTCACCATAGGGTTTAAT  997

seq1  TCT-GAGTTTGCTTTCACCCCAAATGTTGATGAGCATGAATAAATTTATT  1048
      ||| ||||||||||   |||| ||||||||||||||||||||||||||||
seq2  TCTGGAGTTTGCTTCACCCCCGAATGTTGATGAGCATGAATAAATTTATT  1047

seq1  AGTTGAAGCTCAGTCTTGATATCTCATTAAATGT-GATAGCTTTTAGCAT  1097
         |||||||||||| |||||||||||| ||||| |||||||||||||||
seq2  TAGTGAAGCTCAGTC-TGATATCTCATT-AATGTGGATAGCTTTTAGCAT  1095

seq1  GCAAGTTAGGCAGCAATCAGTATAATATGTTCTG-ATCTTTTTCTGTTTA  1146
      || || ||| |||| ||||||||||||||||||| ||| ||||||| |||
seq2  GC-AGGTAGCCAGCCATCAGTATAATATGTTCTGAATCCTTTTCTG-TTA  1143

seq1  ATAGTACTTATGTACAGACTGATGCCCGTTGTTTTTT  1183
      ||   |||||||||| ||||||||||   ||||||||
seq2  AT--GACTTATGTAC-GACTGATGCC--GTGTTTTTT  1175


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