BAC Information

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BAC

Clone NameB6Ng01-199A22
Chromosome3 (Build37)
Map Location 57,093,683 - 57,094,787
singlet/doubletsinglet
Overlap geneTm4sf1
Upstream geneLOC100040139, LOC666585
Downstream geneLOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199A22.bB6Ng01-199A22.g
ACCGA020491GA020492
length9351,083
definitionB6Ng01-199A22.b B6Ng01-199A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttgaaaagatgctgttgaagggactctctgatcctggaaagc
agcctcccctgcgccagaatacagaggctgctgtgactgtagtccaaaat
tccatcttcatttggcagcagaacttgtcagtatcacccatatggtattg
gtgtgaaccatgaagggttgagaggttcatgaactcatacatcacagttc
caaagatctactgaggccaggaaatttgtggcagagttggaactcctgca
aaaatgtcttaagcttcacatgcatgaagctgaaggtgaaacttgagttg
caatggatatttttaatgccagggctatgagcaatccatcaaagaaagga
ataggtatggagtgttggcccaagaaagaaatgatgtgtgctgtaagctg
cagagcaaaagagacgaagcttctctaaccctgtaaagcctagatgattc
catcaggatctccaggtgccagacacagagctaccaggtttagtggttgt
ccttgcaggttcctatactgctttgatccaatcattccttgatttatctt
catttatctcttctagtatgggaatatttactcagtgtcattgtgcatta
ctgtgtaagctgcttttgattgaatatgagttcccagcaaagagattatt
tggactctcaaattagacttgaatttttttttatcataaagcagagactt
gttaaagagtatggggacttttgaagttttactgagagcattttgcatta
tgagatggtatattggtttggtttttgtttgttggtttgttttccaactt
ggatgcaaactaaaggcatttgagaaaggaaacccaccatttgagaaata
ccccccatcagattagtcctgtagaaggcacatggggccattttcttgat
tgttggattgatgtggtaaagggcccataaccatt

gaattcaactgcggcaaaagccaagaggatagaaaatagagtcacatgcc
actccacaatatgcttgggctcatagcacttggaccacatagaggaattc
agaaggtacctgtggacagaagaggaacttcagacacgtggccacagttt
aagaggatatctcataacttgcctttattgtttagagattttcattcaga
aacatggaaatgaattaacacaatgttatgtgctagctacaccgttccaa
caaatggaagggtttagcccaaagattatcccaatgataaacataaaatt
aaaacacaaattttgacaccaatctaggattctgtggttaaaaaattcac
acatgagagatttttatattctttaaaagacatatgacttcttgtgagaa
agaaaagcaaacatatattagcatcatgattaacaccatgtcttgtatca
tatggctgtgaactaaaagtaaaaatggaaaaatggaaacaattcaggct
ggggtagtaaacttacaaagcatatttctgttctgttacccaggtttatc
attgcttaatctttgtctatgagcaagctattgagtaaattttttatttg
gaaaatatattttacagtatactttaaactttgggatcttaattatcact
ttattaagatattaagcactttcctcttttgaaaagtatccaaattctgc
caagttaaaactcaagaggctttcattttcaaatgaaatttgttgatata
aattgtttttaaatttttaagcaaaaagttaattcccaatagaaagtaga
aggatttgagttcagcctctttactttcatgatatcatgctctgtagcaa
tgaagagcaccttttattcagttattagaccaagatggctgatctgctgc
tgtgtgagtgcaacattgagctagagctgcaccgtaaggagcattctgtt
ctgaaagacatgactccagcagagacacggattgagaacatcatgcagta
tggggatcaggaacaagtgaaagctacatcaaaaaaactttccagagagg
actgttatacccactctgcagtcagttcatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57093683_57094787
seq2: B6Ng01-199A22.g_63_1145

seq1  GAATTCAACTGCGGCAAAAGCCAAGAGGATAGAAAATAGAGTCACATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGCGGCAAAAGCCAAGAGGATAGAAAATAGAGTCACATGCC  50

seq1  ACTCCACAATATGCTTGGGCTCATAGCACTTGGACCACATAGAGGAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACAATATGCTTGGGCTCATAGCACTTGGACCACATAGAGGAATTC  100

seq1  AGAAGGTACCTGTGGACAGAAGAGGAACTTCAGACACGTGGCCACAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTACCTGTGGACAGAAGAGGAACTTCAGACACGTGGCCACAGTTT  150

seq1  AAGAGGATATCTCATAACTTGCCTTTATTGTTTAGAGATTTTCATTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATATCTCATAACTTGCCTTTATTGTTTAGAGATTTTCATTCAGA  200

seq1  AACATGGAAATGAATTAACACAATGTTATGTGCTAGCTACACCGTTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGAAATGAATTAACACAATGTTATGTGCTAGCTACACCGTTCCAA  250

seq1  CAAATGGAAGGGTTTAGCCCAAAGATTATCCCAATGATAAACATAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGAAGGGTTTAGCCCAAAGATTATCCCAATGATAAACATAAAATT  300

seq1  AAAACACAAATTTTGACACCAATCTAGGATTCTGTGGTTAAAAAATTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAAATTTTGACACCAATCTAGGATTCTGTGGTTAAAAAATTCAC  350

seq1  ACATGAGAGATTTTTATATTCTTTAAAAGACATATGACTTCTTGTGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAGATTTTTATATTCTTTAAAAGACATATGACTTCTTGTGAGAA  400

seq1  AGAAAAGCAAACATATATTAGCATCATGATTAACACCATGTCTTGTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCAAACATATATTAGCATCATGATTAACACCATGTCTTGTATCA  450

seq1  TATGGCTGTGAACTAAAAGTAAAAATGGAAAAATGGAAACAATTCAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTGTGAACTAAAAGTAAAAATGGAAAAATGGAAACAATTCAGGCT  500

seq1  GGGGTAGTAAACTTACAAAGCATATTTCTGTTCTGTTACCCAGGTTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAGTAAACTTACAAAGCATATTTCTGTTCTGTTACCCAGGTTTATC  550

seq1  ATTGCTTAATCTTTGTCTATGAGCAAGCTATTGAGTAAATTTTTTATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAATCTTTGTCTATGAGCAAGCTATTGAGTAAATTTTTTATTTG  600

seq1  GAAAATATATTTTACAGTATACTTTAAACTTTGGGATCTTAATTATCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATATTTTACAGTATACTTTAAACTTTGGGATCTTAATTATCACT  650

seq1  TTATTAAGATATTAAGCACTTTCCTCTTTTGAAAAGTATCCAAATTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGATATTAAGCACTTTCCTCTTTTGAAAAGTATCCAAATTCTGC  700

seq1  CAAGTTAAAACTCAAGAGGCTTTCATTTTCAAATGAAATTTGTTGATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAAAACTCAAGAGGCTTTCATTTTCAAATGAAATTTGTTGATATA  750

seq1  AATTGTTTTTAAATTTTTAAGCAAAAAGTTAATTCCCAATAGAAAGTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTTTAAATTTTTAAGCAAAAAGTTAATTCCCAATAGAAAGTAGA  800

seq1  AGGATTTGAGTTCAGCCTCTTTACTTTCATGATATCATGCTCTGTAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGAGTTCAGCCTCTTTACTTTCATGATATCATGCTCTGTAGCAA  850

seq1  TGAAGAGCACCTTTTATTCAGTTATTAGACCAAGATGGCTGATCTGCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGCACCTTTTATTCAGTTATTAGACCAAGATGGCTGATCTGCTGC  900

seq1  TGTGTGAGTGCAACATTGAGCTAGAGCTGCACCGTAAGGAGCATTCTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGTGCAACATTGAGCTAGAGCTGCACCGTAAGGAGCATTCTGTT  950

seq1  CTGAAAGAACATGGACTCCAGCAGAAGAACACGGATTGAGAACATCAATG  1000
      ||||||| |||| ||||||||||||   |||||||||||||||||| |||
seq2  CTGAAAG-ACAT-GACTCCAGCAGA--GACACGGATTGAGAACATC-ATG  995

seq1  CCAAGTATGGGGATCAGGGAAACAAAGTGAAAGGCTACCATCAAAAAAAA  1050
      |  |||||||||||||||  ||| |||||||| |||| ||||||||||| 
seq2  C--AGTATGGGGATCAGG--AAC-AAGTGAAA-GCTA-CATCAAAAAAA-  1037

seq1  ACCTTCCCAAGAGAAGACCTGTTTATACCCACTCTGCAAGGCTCAGTTCC  1100
        ||| || ||||| || ||| ||||||||||||||||    |||||| |
seq2  --CTTTCC-AGAGAGGA-CTG-TTATACCCACTCTGCA---GTCAGTT-C  1078

seq1  ATGCA  1105
      |||||
seq2  ATGCA  1083


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