BAC Information

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BAC

Clone NameB6Ng01-200I09
Chromosome3 (Build37)
Map Location 140,309,562 - 140,310,474
singlet/doubletsinglet
Overlap genenone
Upstream geneB930007M17Rik, LOC100039840, LOC229883
Downstream geneLOC621343, 4930590L14Rik, Pdha2, Unc5c, LOC100039923
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200I09.bB6Ng01-200I09.g
ACCGA021558GA021559
length9171,187
definitionB6Ng01-200I09.b B6Ng01-200I09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattatgtattttaatgctttttaatgtgttaaaaacattccagc
cgggcagtggtggcgcatgcctttaatcccagcactcggaggcagaggca
gaggcaggcagatttctgagttcgaggccagcctggtctacaaagtgagt
tccaggacagccagggctacacagagaaaccctgtctcgaaaaaacaaaa
aacaaaaaacaaaaccaaaaaaaaaaaaaaaaaaacacacccaaaaaacc
aaaaaaccaaaaacaatcattccagatagatagtatattttgcaacacac
aaatacatgtataacttgaaaaactgaaaacaaataactaatataactac
tataaaatgaatgttattgtataatacagaatagttacttcctaaagttt
atttctatccaatatttacattacacacaaaactggtagcatattaagtt
gctatataaatacacaccttttgggctttctgctgttttcttctgttcac
tttttctcttttctcaatgtttttgtcatatattccttttatgtgtcctt
tttcctttctcactttgcttgctctctctctcccttccttcctcttagtt
cctccctcccctttcttccttcatcttccttccttcattttccttccttc
cttccttccttccttacttacatccttccttccttccttcctaaattgga
tgtgggaatttctgtcctgcttaagaaatagaaggtgaaactgatgttaa
gcataaattttcataatctcttcctagagcccacctaaattgttaactgc
tcagataatattagcattcccgctgttattttgtctgccatcttgtgtat
atgagaaaactcagtaaaacccttcactcagcaggtaactgcacttcagt
gacacactcaaagtgct
gaattcaacacaccactttcaccaatggacagatcatggaaacagaaact
aaacagggacacactgaaactaacagaagtgatgaaacaaatggatctga
cagatatctacagaacattttatcctaaaacaaaaggatataccttcttc
tcagcacctcatggtaccttctccaaaattgaccacataataggtcacaa
aacaggcctcaacagattcaaaaatattgaaattgtcccatgtatcctat
cagatcaccatgcactaaggctgatcttcaataacaaaaaaaaaataaca
gaaagccaacactcacgtggaaactgaacaacactcttctcaatgatacc
ttggtcaaggaaggaataaagaaagaaattaaagactttttagagtttaa
tgaaaatgaagccacaacgtacccaaacctttgggacacaatgaaagcat
ttctaagagggaaactcatagctatgagtgcctccatgaagaaacgggag
agagcacatactagcagcttgacaacacatctaaaagctctagaaaaaaa
ggaagcaaattcacccaagaggagtagacggcaggaaataatcaaactca
ggggtgaaatcaaccaagtggaaacaagaagaactattcaaagaattaac
caaacgaggagttggttctttgagaaaatcaacaagatagataaaccctt
agctagactcactagagggcacagagacaaaatcctaattaacaaaatca
ggaactgaaaagggagacataacaacagatcctgaagaaatccaaaacac
catcagatccttctacaaaaggctatactcaacaaaactggaaaacctgg
acgaatggacaaattttctggacagataccaggtaccaaagttgaatcag
gatcaagttgaccttctaaacagtcccatatcccctaaagaaaatagagc
agttataaaatagtctcccagccaaaaaaagcccaggaccagacgggttt
actgcagagttctatcagaccttcaagaaggatctaatttcagttcttgc
acaaactttttcacaaagaatagaagtataaagtactctacccactcatt
tttatgagcactatactctggatatcttaaacccgagattcatcagtagg
acctcgaacaattttcctatgaatattgaatggccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_140309562_140310474
seq2: B6Ng01-200I09.b_45_961 (reverse)

seq1  AGCACTTTGAAGTGTGTCACTGAAGTGCAGTTACCTGCTGAGGTAATGGT  50
      ||||||||| ||||||||||||||||||||||||||||||||  || |||
seq2  AGCACTTTG-AGTGTGTCACTGAAGTGCAGTTACCTGCTGAGTGAAGGGT  49

seq1  TTTACTGAGTTTGC-CATATACACAAAATGGCAGACATAATAACAGC-GG  98
      |||||||||||| | ||||||||||| |||||||||| ||||||||| ||
seq2  TTTACTGAGTTTTCTCATATACACAAGATGGCAGACAAAATAACAGCGGG  99

seq1  AATGCTAATATTATCTGAGCAGTTAAC-ATTTAGGTGGGCTCTAGG-AGA  146
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  AATGCTAATATTATCTGAGCAGTTAACAATTTAGGTGGGCTCTAGGAAGA  149

seq1  GATT-TGAAAA-TTATGCTTAAACATCAGTTTCACCTTCTATTTCTTAAG  194
      |||| |||||| |||||||| |||||||||||||||||||||||||||||
seq2  GATTATGAAAATTTATGCTT-AACATCAGTTTCACCTTCTATTTCTTAAG  198

seq1  CAGGACAGAAATT-CCACATCCAATTTAAGGAAGGAAGGAAGGAAGGAAG  243
      ||||||||||||| ||||||||||||| |||||||||||||||||||| |
seq2  CAGGACAGAAATTCCCACATCCAATTT-AGGAAGGAAGGAAGGAAGGATG  247

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAATGAAGGAAGGAAGATGA  293
       ||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAGGAAGGAAGGAAGGAAGGAAGGAAAATGAAGGAAGGAAGATGA  297

seq1  AGGAAGAAAGGGGAGGGAGGAACTAAGAGGAAGGAAGGGAGAGAGAGAGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAAGGGGAGGGAGGAACTAAGAGGAAGGAAGGGAGAGAGAGAGC  347

seq1  AAGCAAAGTGAGAAAGGAAAAAGGACACATAAAAGGAATATATGACAAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGTGAGAAAGGAAAAAGGACACATAAAAGGAATATATGACAAAA  397

seq1  ACATTGAGAAAAGAGAAAAAGTGAACAGAAGAAAACAGCAGAAAGCCCAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAGAAAAGAGAAAAAGTGAACAGAAGAAAACAGCAGAAAGCCCAA  447

seq1  AAGGTGTGTATTTATATAGCAACTTAATATGCTACCAGTTTTGTGTGTAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTGTATTTATATAGCAACTTAATATGCTACCAGTTTTGTGTGTAA  497

seq1  TGTAAATATTGGATAGAAATAAACTTTAGGAAGTAACTATTCTGTATTAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATTGGATAGAAATAAACTTTAGGAAGTAACTATTCTGTATTAT  547

seq1  ACAATAACATTCATTTTATAGTAGTTATATTAGTTATTTGTTTTCAGTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAACATTCATTTTATAGTAGTTATATTAGTTATTTGTTTTCAGTTT  597

seq1  TTCAAGTTATACATGTATTTGTGTGTTGCAAAATATACTATCTATCTGGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTTATACATGTATTTGTGTGTTGCAAAATATACTATCTATCTGGA  647

seq1  ATGATTGTTTTTGGTTTTTTGGTTTTTTGGGTGTGTTTTTTTTTTTTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGTTTTTGGTTTTTTGGTTTTTTGGGTGTGTTTTTTTTTTTTTTT  697

seq1  TTTTGGTTTTGTTTTTTGTTTTTTGTTTTTTCGAGACAGGGTTTCTCTGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTTGTTTTTTGTTTTTTGTTTTTTCGAGACAGGGTTTCTCTGT  747

seq1  GTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAA  797

seq1  CTCAGAAATCTGCCTGCCTCTGCCTCTGCCTCCGAGTGCTGGGATTAAAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCTGCCTGCCTCTGCCTCTGCCTCCGAGTGCTGGGATTAAAG  847

seq1  GCATGCGCCACCACTGCCCGGCTGGAATGTTTTTAACACATTAAAAAGCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCGCCACCACTGCCCGGCTGGAATGTTTTTAACACATTAAAAAGCA  897

seq1  TTAAAATACATAATGAATTC  913
      ||||||||||||||||||||
seq2  TTAAAATACATAATGAATTC  917