BAC Information

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BAC

Clone NameB6Ng01-200K23
Chromosome3 (Build37)
Map Location 67,120,855 - 67,121,876
singlet/doubletsinglet
Overlap geneRsrc1
Upstream geneLOC625115, Shox2
Downstream geneMlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426, EG545531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200K23.bB6Ng01-200K23.g
ACCGA021678GA021679
length1,0671,074
definitionB6Ng01-200K23.b B6Ng01-200K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtattccactgtgtaaacgtacc
acattttctgtatccattttttttttcagttgagggacatctgggttgtt
tcatttctggctattatgaataaatctgctgtgaacatactggaacatgt
gtctttggggtctggtggaacatcttttgggtctatgcccaggtgtggta
tagctgggtcttcaggtagaactattttcagttttttgagaaactgtcag
attgatttccagagtggttgtatatttgcagacccaccagcaatggagta
gtgttcccctttctccacatccttgccagcatgtgctgttgcttgaggtt
ttgattatagccattctgattggtgtaagtggagtgtcagatcggttttg
atttgcttttccccaatgactataaggcagttggacaacatttctttcag
tttcatgaggtcacgtttaacagttgttgtgccattggagttctgttcag
gaaaatttttcctatagcagtgtattcaaggctcttaatcactttttctt
ctattaggtgtagtgaatccagttttatgttgactttcttgatccacctg
tacttaaattttgtgccaggtgacatgtgtgggtctatttccatttttct
acatgtatatatccagttagaccagcactaattgttgaaaattctttctt
ttgtccattgtatggtttttgtctttgtcgaaaataaagtgttcagaggt
gtgtgggtgtatttctgggtcttcaatctatcagctttaggagttgtctg
gtagaattgtggggctcccctatgtatcctttcatagtgtctgcagcttg
gggatacctttacttcttcttttctcattttgtttccctggttctccctt
tagttgaattcctaaccctagctaggacttcaagatctatattgaataaa
ataagaggggagaatgggcaacccttgtcttggtccctaaatataagtgg
aattggcttcaggttcccttcaattaagcttggatgtgggctaatgggct
tgcggatattgccttac
gaattcctaatcttggagtgctaggattataggggtgtgacaccatatct
tgctctaaaaaatactttattaatgattatcttaatgtgtcagtagacca
gaagtaggagttcatttctcctcttcttgatagccagtggaggaatagtt
gacatttcttgtagtcaaaataacgccagagttcaccatagaatagacag
cacatccaagctcaactgctgtctgctgattttaagatgaactctcatct
taattgtaagatgaactcttatgttagagatattaaaataatataattag
ttaagatttagccaaacattatggtgcattactttaattctaggaattta
gaggcagagaggcattcgcagatctctgaggattcaaagtcagcttggtt
tacatggtgacaaccagagctgtatagagagaacctctcattaaccccca
ttaaaagttatgtgttagtttgacatcagcattggaaattaaaacaaaat
tatgctttcatgataaagaaatatggtttgatatgtttaaagatccacaa
atatttggtcaccaatgtgctttcaaaacagccacagaggctaggtagct
agtaagggaacagttggtgaagaggaggtcctctaaaggaagggaaatgg
catctagtgttacaaagagataaaagaagctagaacgattaaaagaggag
aggacttggagatcaggacaaaggagagaatgtggggcaagaaaactaag
actgaaagccttttgaaaagctacatggaagtttccctaaaatatataca
catatgaaagcaatttaaaaagagtcaccacctagataaatcctgcacac
ttacgggcacatgttttttgacaaagaagccaaaactataaaatgggaaa
aaagaaacaatgttcaagaatgtgctggtctaactggatgtctccatgta
gaaaccatcctccaccaatgtgctagtctactagatgtctccatgtacag
aatgccaaatagatctatatctatcaccctttcaacaagactcagttcca
aggtggaataaaagacctcaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67120855_67121876
seq2: B6Ng01-200K23.g_115_1139 (reverse)

seq1  TTGTTGAGGTCTTTTA-TCCA-CTTGGACTTGAGTCTTGT--GAAGGGTG  46
      |||||||||||||||| |||| ||||||  ||||||||||   |||||||
seq2  TTGTTGAGGTCTTTTATTCCACCTTGGAACTGAGTCTTGTTGAAAGGGTG  50

seq1  ATAGATATAGATCTATTT-GCATTCTTGTACATGGAGACATCTAGTTAGA  95
      |||||||||||||||||| |||||| ||||||||||||||||||| ||||
seq2  ATAGATATAGATCTATTTGGCATTC-TGTACATGGAGACATCTAG-TAGA  98

seq1  CTAGCACATTTGTTGAAGATGGTTTCTACATGGAGACATCCAGTTAGACC  145
      |||||||||| || || |||||||||||||||||||||||||||||||||
seq2  CTAGCACATTGGTGGAGGATGGTTTCTACATGGAGACATCCAGTTAGACC  148

seq1  AGCACATTTCTTGAACATTGTTTCTTTTTT-CCATTTTATAGTTTTGGCT  194
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  AGCACA-TTCTTGAACATTGTTTCTTTTTTCCCATTTTATAGTTTTGGCT  197

seq1  TCTTTGTCAAAAAACATGTGCCCGTAAGTGTGCAGGATTTATCTAGGTGG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCAAAAAACATGTGCCCGTAAGTGTGCAGGATTTATCTAGGTGG  247

seq1  TGACTCTTTTTAAATTGCTTTCATATGTGTATATATTTTAGGGAAACTTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTTTTAAATTGCTTTCATATGTGTATATATTTTAGGGAAACTTC  297

seq1  CATGTAGCTTTTCAAAAGGCTTTCAGTCTTAGTTTTCTTGCCCCACATTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGCTTTTCAAAAGGCTTTCAGTCTTAGTTTTCTTGCCCCACATTC  347

seq1  TCTCCTTTGTCCTGATCTCCAAGTCCTCTCCTCTTTTAATCGTTCTAGCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTGTCCTGATCTCCAAGTCCTCTCCTCTTTTAATCGTTCTAGCT  397

seq1  TCTTTTATCTCTTTGTAACACTAGATGCCATTTCCCTTCCTTTAGAGGAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATCTCTTTGTAACACTAGATGCCATTTCCCTTCCTTTAGAGGAC  447

seq1  CTCCTCTTCACCAACTGTTCCCTTACTAGCTACCTAGCCTCTGTGGCTGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTCACCAACTGTTCCCTTACTAGCTACCTAGCCTCTGTGGCTGT  497

seq1  TTTGAAAGCACATTGGTGACCAAATATTTGTGGATCTTTAAACATATCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGCACATTGGTGACCAAATATTTGTGGATCTTTAAACATATCAA  547

seq1  ACCATATTTCTTTATCATGAAAGCATAATTTTGTTTTAATTTCCAATGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATTTCTTTATCATGAAAGCATAATTTTGTTTTAATTTCCAATGCT  597

seq1  GATGTCAAACTAACACATAACTTTTAATGGGGGTTAATGAGAGGTTCTCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAAACTAACACATAACTTTTAATGGGGGTTAATGAGAGGTTCTCT  647

seq1  CTATACAGCTCTGGTTGTCACCATGTAAACCAAGCTGACTTTGAATCCTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGCTCTGGTTGTCACCATGTAAACCAAGCTGACTTTGAATCCTC  697

seq1  AGAGATCTGCGAATGCCTCTCTGCCTCTAAATTCCTAGAATTAAAGTAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTGCGAATGCCTCTCTGCCTCTAAATTCCTAGAATTAAAGTAAT  747

seq1  GCACCATAATGTTTGGCTAAATCTTAACTAATTATATTATTTTAATATCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATAATGTTTGGCTAAATCTTAACTAATTATATTATTTTAATATCT  797

seq1  CTAACATAAGAGTTCATCTTACAATTAAGATGAGAGTTCATCTTAAAATC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAAGAGTTCATCTTACAATTAAGATGAGAGTTCATCTTAAAATC  847

seq1  AGCAGACAGCAGTTGAGCTTGGATGTGCTGTCTATTCTATGGTGAACTCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACAGCAGTTGAGCTTGGATGTGCTGTCTATTCTATGGTGAACTCT  897

seq1  GGCGTTATTTTGACTACAAGAAATGTCAACTATTCCTCCACTGGCTATCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTATTTTGACTACAAGAAATGTCAACTATTCCTCCACTGGCTATCA  947

seq1  AGAAGAGGAGAAATGAACTCCTACTTCTGGTCTACTGACACATTAAGATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGAGAAATGAACTCCTACTTCTGGTCTACTGACACATTAAGATA  997

seq1  ATCATTAATAAAGTATTTTTTAGAGCAA  1022
      ||||||||||||||||||||||||||||
seq2  ATCATTAATAAAGTATTTTTTAGAGCAA  1025