BAC Information

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BAC

Clone NameB6Ng01-201B05
Chromosome3 (Build37)
Map Location 14,870,838 - 14,871,903
singlet/doubletsinglet
Overlap geneCar3
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785
Downstream geneCar2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201B05.bB6Ng01-201B05.g
ACCGA021950GA021951
length4961,050
definitionB6Ng01-201B05.b B6Ng01-201B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agttgctatatttaaaaatgttcttggacatcaatctggtgattccttag
aaaactggaaatactataccactcctggggatatacccaaaagatgcttc
accataccacaaggacgtgtttgtagcaatcttattcttaataaccaaaa
agcaggaagcaatccagttgtccctcaacagaaaaacagataaagaaaat
gtggttcatttacaccatggaatactatttagctattaaaaatgaggaca
tcatgaattttgtaggcaaattggatggaactagaaaatatcatcttgag
ttaggtaactgagacccaaaaggacatgcatggtatatatgcactaataa
gtggatattagccaagaaatacaaaatactcatgatacaatttacagacc
ataagaagtttatgaaggaaggcccaagtgagaatgctttaatcccattt
aaaagagaggacaaagtaatcattggatgcagagtggggggggggg
gaattcatactagaaatactaattattattatttttttttagaacaggtg
gttattaagaatgttaggtgtgaaattcatgcttctgggtgagatcatgt
caaaaggcactgcggttgcatgtgactgcttctcctcttcctctaggtgt
tgtcggacagcttggagtagggagcaccaggaggagacaagcaggctctt
caggggcagagtttcttgcccgaagagggcaagctcagagccttacttga
aggaggccctcaccaccctgcccttgacaggctgaggagggcgccaattc
cccaccagaggcaccgggggctcattctctgcgctggagaagaggctgcg
cagcttggccatctgcaagaggaagcagactgttagaaaccacaggcttt
ctaactggccagacaaaccacagccaggctccagggataggtcctgagtt
tgtaagccccagctcataacatagaccgtttcttacatccagaattccct
gctctcagaattacaccttccacaccagggttcagcatgaactttatata
catagaggggatggggatgtatcatatgcctgaacgtaagaaaaacttca
aaaggctcccacagtgtaatcaagtcaagtgtttatggaattacatttta
aaggactagaaagaaatttaaaacggggtatatgttaaactgtgtactat
tctttttcttaagggatcagaaaatgaggaattctcataaaaaatatcat
gtcttggtagttgaggtggttcagtgtgtaaaggtgctatgggccaagtc
tgacaacctgagttctacacccagaacccacaaggccacaagctgccttc
tgaacatcagaggtagactgtcaatgttaaaatatattatgctccactac
taaattttcttttagctttcttccccctttaaaattaaaaatgtcattcg
acctttaaaatcttataccattaccagattgttaaagtgaatctgatttc
ttttctttttatgtggctattcttagtccaccctgagaacacacagctgc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14870838_14871903
seq2: B6Ng01-201B05.g_64_1113 (reverse)

seq1  GCAGCTTGTGTGTTTCTTCCAGGGTGGACCTAAGAATAAACCAACATTAA  50
      ||||| |||||| ||||  ||||||||| ||||||||  | | ||||  |
seq2  GCAGC-TGTGTG-TTCT--CAGGGTGGA-CTAAGAAT--AGCCACAT--A  41

seq1  AAAAGAAAAAGAAAATCAAGATTCACCTTTAACAATCTTGTTAATTGGTA  100
      |||||||||   ||||| ||||||| |||||||||||| ||  | |||||
seq2  AAAAGAAAA--GAAATC-AGATTCA-CTTTAACAATCTGGT--AATGGTA  85

seq1  TAAAGATTTTAAAGGTCGAATGACAATTTTTAATTTTAAAGGGGGAAGAA  150
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  T-AAGATTTTAAAGGTCGAATGAC-ATTTTTAATTTTAAAGGGGGAAGAA  133

seq1  AGCTAAAAGAAAATTTAGTAGTGGAGCATAATATATTTTAACATTGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAAGAAAATTTAGTAGTGGAGCATAATATATTTTAACATTGACAG  183

seq1  TCTACCTCTGATGTTCAGAAGGCAGCTTGTGGCCTTGTGGGTTCTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCTGATGTTCAGAAGGCAGCTTGTGGCCTTGTGGGTTCTGGGTG  233

seq1  TAGAACTCAGGTTGTCAGACTTGG-CCATAGCACCTTTACACACTGAACC  299
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGAACTCAGGTTGTCAGACTTGGCCCATAGCACCTTTACACACTGAACC  283

seq1  ACCTCAACTACCAAGACATGATATTTTTTATGAGAATTCCTCATTTTCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAACTACCAAGACATGATATTTTTTATGAGAATTCCTCATTTTCTG  333

seq1  ATCCCTTAAGAAAAAGAATAGTACACAGTTTAACATATACCCCGTTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTAAGAAAAAGAATAGTACACAGTTTAACATATACCCCGTTTTAA  383

seq1  ATTTCTTTCTAGTCCTTTAAAATGTAATTCCATAAACACTTGACTTGATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTAGTCCTTTAAAATGTAATTCCATAAACACTTGACTTGATT  433

seq1  ACACTGTGGGAGCCTTTTGAAGTTTTTCTTACGTTCAGGCATATGATACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGGGAGCCTTTTGAAGTTTTTCTTACGTTCAGGCATATGATACA  483

seq1  TCCCCATCCCCTCTATGTATATAAAGTTCATGCTGAACCCTGGTGTGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCCCCTCTATGTATATAAAGTTCATGCTGAACCCTGGTGTGGAA  533

seq1  GGTGTAATTCTGAGAGCAGGGAATTCTGGATGTAAGAAACGGTCTATGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAATTCTGAGAGCAGGGAATTCTGGATGTAAGAAACGGTCTATGTT  583

seq1  ATGAGCTGGGGCTTACAAACTCAGGACCTATCCCTGGAGCCTGGCTGTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTGGGGCTTACAAACTCAGGACCTATCCCTGGAGCCTGGCTGTGG  633

seq1  TTTGTCTGGCCAGTTAGAAAGCCTGTGGTTTCTAACAGTCTGCTTCCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGGCCAGTTAGAAAGCCTGTGGTTTCTAACAGTCTGCTTCCTCT  683

seq1  TGCAGATGGCCAAGCTGCGCAGCCTCTTCTCCAGCGCAGAGAATGAGCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGGCCAAGCTGCGCAGCCTCTTCTCCAGCGCAGAGAATGAGCCC  733

seq1  CCGGTGCCTCTGGTGGGGAATTGGCGCCCTCCTCAGCCTGTCAAGGGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGCCTCTGGTGGGGAATTGGCGCCCTCCTCAGCCTGTCAAGGGCAG  783

seq1  GGTGGTGAGGGCCTCCTTCAAGTAAGGCTCTGAGCTTGCCCTCTTCGGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGAGGGCCTCCTTCAAGTAAGGCTCTGAGCTTGCCCTCTTCGGGC  833

seq1  AAGAAACTCTGCCCCTGAAGAGCCTGCTTGTCTCCTCCTGGTGCTCCCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTCTGCCCCTGAAGAGCCTGCTTGTCTCCTCCTGGTGCTCCCTA  883

seq1  CTCCAAGCTGTCCGACAACACCTAGAGGAAGAGGAGAAGCAGTCACATGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGCTGTCCGACAACACCTAGAGGAAGAGGAGAAGCAGTCACATGC  933

seq1  AACCGCAGTGCCTTTTGACATGATCTCACCCAGAAGCATGAATTTCACAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCAGTGCCTTTTGACATGATCTCACCCAGAAGCATGAATTTCACAC  983

seq1  CTAACATTCTTAATAACCACCTGTTCTAAAAAAAAATAATAATAATTAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTCTTAATAACCACCTGTTCTAAAAAAAAATAATAATAATTAGT  1033

seq1  ATTTCTAGTATGAATTC  1066
      |||||||||||||||||
seq2  ATTTCTAGTATGAATTC  1050