BAC Information

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BAC

Clone NameB6Ng01-202C24
Chromosome3 (Build37)
Map Location 155,196,983 - 155,198,137
singlet/doubletsinglet
Overlap genenone
Upstream geneTyw3, Cryz, BC007180, Tnni3k, Fpgt, Lrrc44, EG383956, Scp2-ps1
Downstream geneEG668902, LOC624519, LOC100040901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202C24.bB6Ng01-202C24.g
ACCGA022752GA022753
length1,2011,159
definitionB6Ng01-202C24.b B6Ng01-202C24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatt
ttcaacatccttaatcatcagggagatgtaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaatattcaggagacagc
agatgctggcgaggatgtggagaaagaggaacactcctctattgttggtg
ggattgcaagttcgcacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggc
atttacccagaagattccccaacaggtaagtaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaacg
aagtactactcagctattaaaaagaatgaagttatgaaattcctaggcaa
atggatggacatggagggcatcatcctgagtgaggtaaccccatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggataccgaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaacgaataccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgtgacg
aaaggatggaccatctagagactaccatatcagggatccatcccataatc
agcttccaaatgctgacaccattgcacacactagcaaatgtttgttgtaa
ggacccagatatagctctctctagtgagactatgctggggcctagcaaac
actgaagtggatgctcacagtcagctattggatggatcactgggccccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggaacacattatgaactacccagtacccagagctcttgactcta
actgcataatgtatcaaaagatggcctagtcagccatcactgggaagaag
aagtccttttgactggcaaactttacatggcccaaagttaccggatgcca
tgcaaaagtggagtccggtggattaagcgtagatgtgtggatgctataga
g
gaattctctagagtttaaaaggtactaatggctatttattgccttcacta
aaagtacaccaggagggccagagatagctcaaaaggtaggaaacttgtct
tgcaaacacagagccctgaattagataccagaactctcagtggaaggcaa
agagggattcttgaatgttaacctgtatgtacatggtcacatttgtgtgt
tcacacatgcacacacatgcaaaatgcatatacaaacatgtacacacaca
tacacagatacatgtacacacacgcacacacataagtacatgaacacaaa
aattagtaaataaagtaagaacttttacaaaatatggccataaacctgca
tcatttaccagctctcggggaagtttagataaaagagcataataccctga
aatagttcacagtctaatgaattctacatatttactacaaattcctatga
attaaaacacaatcacaaaattataattcagaattttctctattatgctg
atattaaattaatttaaaattcacgtaatcacagctatgtagttctattc
aaaacactgtggagacaaaattgaaagctaacagaagagaaatagaccaa
ggagagagtctgaggtcttaaattaatcttagattaatagtattagatct
aacaacctcaaaaattgtttgcgtggttttatgatatgactacaaacatc
atgagaaattgtgcatgatgtctaaaatactggtcatgacttttattctt
tctgcattgaacaagaacaagattcatcaattttttttacattctatgtt
ttcttattattattactcatggaaacacacagtttcatggatgtccatta
tatagagtgacttctgttgaatttctctacattttatgagttacttggaa
attatattcatcttttcatctttaacatacattttctaaggaagaaaata
tctccttgcatatcaaaattaaataatgatacacattggtcttttttaag
taaaaatcacttttatcaataatttttccactatttgagtagaagcgata
cacatgggaaatcagattagaacagaagatggctaacctaatttaactgt
tgaattaaatattgtagaacaagtgaaggatcaagagttagccatcaact
tatcacaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_155196983_155198137
seq2: B6Ng01-202C24.g_61_1219 (reverse)

seq1  TCTGTGATAAGTTGGTTTGCTAACTCCTTGATCCTTCCACTTTGTCTACA  50
      ||||||||||||| | | ||||||| |||||||||| |||||  ||||||
seq2  TCTGTGATAAGTT-GATGGCTAACT-CTTGATCCTT-CACTTGTTCTACA  47

seq1  TTATTT-ATTCACCAATTTAATTA-GTTAGCCATC-TCTGTTCTAATCTG  97
       ||||| ||||| || || ||||| |||||||||| ||||||||||||||
seq2  ATATTTAATTCAACAGTTAAATTAGGTTAGCCATCTTCTGTTCTAATCTG  97

seq1  ATT--CCATGTGTATCGCTCTAACTCAATTAGTGGAAAAATTATTGATAA  145
      |||  ||||||||||||||   |||||| |||||||||||||||||||||
seq2  ATTTCCCATGTGTATCGCTTCTACTCAAATAGTGGAAAAATTATTGATAA  147

seq1  AATTGATTTTTACTT-AAAAAGACCAATGTGTATCATTATTTAATTTTGA  194
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTTTACTTAAAAAAGACCAATGTGTATCATTATTTAATTTTGA  197

seq1  TATGCAAGGAGATATTTTTCTTCCTTAGAAAATGTATGTTAAAGATGAAA  244
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATGCAAGGAGATA-TTTTCTTCCTTAGAAAATGTATGTTAAAGATGAAA  246

seq1  AGATGAATATAATTT-CAAGTAACTCATAAAATGTAGAGAAATTCAACAG  293
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGATGAATATAATTTCCAAGTAACTCATAAAATGTAGAGAAATTCAACAG  296

seq1  AAGTCACTCTATATAATGGACATCCATGAAACTGTGTGTTTCCATGAGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTCTATATAATGGACATCCATGAAACTGTGTGTTTCCATGAGTA  346

seq1  ATAATAATAAGAAAACATAGAATGT-AAAAAAATTGATGAATCTTGTTCT  392
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAATAATAAGAAAACATAGAATGTAAAAAAAATTGATGAATCTTGTTCT  396

seq1  TGTTCAATGCAGAAAGAATAAAAGTCATGACCAGTATTTTAGACATCATG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATGCAGAAAGAATAAAAGTCATGACCAGTATTTTAGACATCATG  446

seq1  CACAATTTCTCATGATGTTTGTAGTCATATCATAAAACCACGCAAACAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTTCTCATGATGTTTGTAGTCATATCATAAAACCACGCAAACAAT  496

seq1  TTTTGAGGTTGTTAGATCTAATACTATTAATCTAAGATTAATTTAAGACC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGTTGTTAGATCTAATACTATTAATCTAAGATTAATTTAAGACC  546

seq1  TCAGACTCTCTCCTTGGTCTATTTCTCTTCTGTTAGCTTTCAATTTTGTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTCTCTCCTTGGTCTATTTCTCTTCTGTTAGCTTTCAATTTTGTC  596

seq1  TCCACAGTGTTTTGAATAGAACTACATAGCTGTGATTACGTGAATTTTAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTGTTTTGAATAGAACTACATAGCTGTGATTACGTGAATTTTAA  646

seq1  ATTAATTTAATATCAGCATAATAGAGAAAATTCTGAATTATAATTTTGTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTAATATCAGCATAATAGAGAAAATTCTGAATTATAATTTTGTG  696

seq1  ATTGTGTTTTAATTCATAGGAATTTGTAGTAAATATGTAGAATTCATTAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTTTAATTCATAGGAATTTGTAGTAAATATGTAGAATTCATTAG  746

seq1  ACTGTGAACTATTTCAGGGTATTATGCTCTTTTATCTAAACTTCCCCGAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAACTATTTCAGGGTATTATGCTCTTTTATCTAAACTTCCCCGAG  796

seq1  AGCTGGTAAATGATGCAGGTTTATGGCCATATTTTGTAAAAGTTCTTACT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTAAATGATGCAGGTTTATGGCCATATTTTGTAAAAGTTCTTACT  846

seq1  TTATTTACTAATTTTTGTGTTCATGTACTTATGTGTGTGCGTGTGTGTAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACTAATTTTTGTGTTCATGTACTTATGTGTGTGCGTGTGTGTAC  896

seq1  ATGTATCTGTGTATGTGTGTGTACATGTTTGTATATGCATTTTGCATGTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGTGTATGTGTGTGTACATGTTTGTATATGCATTTTGCATGTG  946

seq1  TGTGCATGTGTGAACACACAAATGTGACCATGTACATACAGGTTAACATT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTGTGAACACACAAATGTGACCATGTACATACAGGTTAACATT  996

seq1  CAAGAATCCCTCTTTGCCTTCCACTGAGAGTTCTGGTATCTAATTCAGGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCCCTCTTTGCCTTCCACTGAGAGTTCTGGTATCTAATTCAGGG  1046

seq1  CTCTGTGTTTGCAAGACAAGTTTCCTACCTTTTGAGCTATCTCTGGCCCT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTTTGCAAGACAAGTTTCCTACCTTTTGAGCTATCTCTGGCCCT  1096

seq1  CCTGGTGTACTTTTAGTGAAGGCAATAAATAGCCATTAGTACCTTTTAAA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGTACTTTTAGTGAAGGCAATAAATAGCCATTAGTACCTTTTAAA  1146

seq1  CTCTAGAGAATTC  1155
      |||||||||||||
seq2  CTCTAGAGAATTC  1159