BAC Information

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BAC

Clone NameB6Ng01-203L15
Chromosome3 (Build37)
Map Location 76,244,078 - 76,342,912
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203L15.bB6Ng01-203L15.g
ACCGA023860GA023861
length9671,079
definitionB6Ng01-203L15.b B6Ng01-203L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,244,078 - 76,244,801)(76,341,827 - 76,342,912)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagttta
aattttctcttactgatgaaaaatgtagcttgaaataatatcaaattagg
ctgagaagactgaagatgtaaactagtaatagtagtgcatgctatatgta
taaattattgtttgatgaaattagctttactagaattattttttaatttt
attacataatttattagatatctttatttactttttaatttttttaaata
tttttttgtttgtttgggttttttttgttttttgttttttgttttttgtt
tttcgagacagggtttctctgtatagccctggctgtcctggaactcacct
tgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcccctc
aagtgctgggattaaaggcatgcactaccaccactcagacttttcttttc
ttttcttttcttttcttttcttttcttttcttttcttttcttttcttttc
ttttctttttttcctttcctttcctttcctttcctttcctttcctttcct
tttccttttccttttccttttcctttcttttcttttctaatttttattag
atattttcttcatttacatttcaaatgctatcccgtaagtcccctatacc
caccccctgccctgctcccctacccacccactcccacttaaagtttgcaa
gagcaaggggcctctcttctcaatggtagccgactaggccatcttctact
acatatgcagctagagacatgagctctgggggtactggttagttcatatt
gttgttccacctatagggttgtagaaaagtcccctacaactgttattctc
tcctccctcccactgttcaccaacccacccactactgctgcctggtcctg
gcatttgccaacactgg

gaattccacagagataactgtttgttttgaatttcttataatttgaattt
cttataataaggttatcattgatggtggatggggtttcatgtcagaggtc
tcttggattttgtttgtttgtttgtttgtttgttgtattttttttctatt
ctactttcaggaaaaaaaaaacttacatgaaagaacaaacacttcattca
caatagaggataaaacagggaacagcatggtacctgggtttgagtcctac
aacatagaaacccaaattttggctcaggtccttgaatttttcacctggca
ctcaatgactttctgaaagtagatgacattctgaataaaccagtgtcaga
gaggaacaaggaggaggaacccctgaagggcagccatgcagcctggttct
catgacctgaactcccacgtgttacaagctccctgcagcacagtctccag
cttgcctgggaaagccacactttccaaatagctgatgaagactggggatt
catagttttcatattttaaaataaagttctgacgaagatggaatatgaac
tgtttgttaaggaaggagcatgtggctagagtgaaagaaggagggctgag
attgacaggaagtggtgttaggagacaaaaattaactgcttgcaatagag
tgaagtagaacttttatgttttctttccacaaacagtaagaaagttccca
gagctagactggttgaagtcaattactggtaaaagggaaaaatgaatagg
ccttgctatgtcagttatactaggcctaatgtatttagactgtaagcacc
cacagaatggagtcaaccggaaatatggctcagggtctgtcaatcctgtt
caaagcacgtgaaatgcagagcatgccattgctttgtgctcttcacagat
tcccttggaaactgacttcaaactaggagccagtgcaagtttccctgctg
agtttcccagaagtcacaggctgtacctagtactattgagtgtcccagac
catcagactaccatgttttcagcactgtgtaataatgtctttttataggt
gagtctatgcctagctcaaatccctcccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76244078_76244801
seq2: B6Ng01-203L15.b_48_776

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTTTA  100

seq1  AATTTTCTCTTACTGATGAAAAATGTAGCTTGAAATAATATCAAATTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCTTACTGATGAAAAATGTAGCTTGAAATAATATCAAATTAGG  150

seq1  CTGAGAAGACTGAAGATGTAAACTAGTAATAGTAGTGCATGCTATATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGACTGAAGATGTAAACTAGTAATAGTAGTGCATGCTATATGTA  200

seq1  TAAATTATTGTTTGATGAAATTAGCTTTACTAGAATTATTTTTTAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATTGTTTGATGAAATTAGCTTTACTAGAATTATTTTTTAATTTT  250

seq1  ATTACATAATTTATTAGATATCTTTATTTACTTTTTAATTTTTTTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATAATTTATTAGATATCTTTATTTACTTTTTAATTTTTTTAAATA  300

seq1  TTTTTTTGTTTGTTTGGGTTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTGTTTGGGTTTTTTTTGTTTTTTGTTTTTTGTTTTTTGTT  350

seq1  TTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACCT  400

seq1  TGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCCCTC  450

seq1  AAGTGCTGGGATTAAAGGCATGCACTACCACCACTCAGA-----CTTTTC  495
      |||||||||||||||||||||||||||||||||||||||     ||||||
seq2  AAGTGCTGGGATTAAAGGCATGCACTACCACCACTCAGACTTTTCTTTTC  500

seq1  TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC  550

seq1  TTTTCTTTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT  600

seq1  TTTCCTTTTCCTTTTCCTTTTCCTTTCTTTTCTTTTCTAATTTTTATTAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTCCTTTTCCTTTTCCTTTCTTTTCTTTTCTAATTTTTATTAG  650

seq1  ATATTTTCTTCATTTACATTTCAAATGCTATCCCGTAAGTCCCCTATACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTTCATTTACATTTCAAATGCTATCCCGTAAGTCCCCTATACC  700

seq1  CACCCCCTGCCCTGCTCCCCTACCCACCC  724
      |||||||||||||||||||||||||||||
seq2  CACCCCCTGCCCTGCTCCCCTACCCACCC  729


seq1: chr3_76341827_76342912
seq2: B6Ng01-203L15.g_65_1143 (reverse)

seq1  CGGGAGGGAATTTGAAGCTA-GCATAGGACTCACTTATAAAAAGACATTA  49
      |||||||| ||||| ||||| ||||| ||||||| |||||||||||||||
seq2  CGGGAGGG-ATTTG-AGCTAGGCATA-GACTCACCTATAAAAAGACATTA  47

seq1  ATAACAACAGTGCTGGAAAACATGGGTAGTCTGATGGTCTGGGACACTCA  99
       ||   |||||||| |||||||| ||||||||||||||||||||||||||
seq2  TTA--CACAGTGCT-GAAAACAT-GGTAGTCTGATGGTCTGGGACACTCA  93

seq1  ATAGTACTAGGTACAGCCTGTGACTTCTGGGGAAAACTCAGCA-GGAAAC  148
      |||||||||||||||||||||||||||||||  |||||||||| ||||||
seq2  ATAGTACTAGGTACAGCCTGTGACTTCTGGG--AAACTCAGCAGGGAAAC  141

seq1  TTGCACTGGCT-CTAGTTTGAAGTCAGTTTCCAAGGGAATCTGTGAAGAG  197
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTGGCTCCTAGTTTGAAGTCAGTTTCCAAGGGAATCTGTGAAGAG  191

seq1  CACAAAGCAATGGCATGCTCTGCATTTCACGTGCTTTGAACAGGATTGAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCAATGGCATGCTCTGCATTTCACGTGCTTTGAACAGGATTGAC  241

seq1  AGACCCCTGAGCCATATTTCCGGTTGACTCCATTCTGTGGGTGCTTACAG  297
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGA-CCCTGAGCCATATTTCCGGTTGACTCCATTCTGTGGGTGCTTACAG  290

seq1  TCTAAATACATTAGGCCTAGTATAACTGACATAGCAAGGCCTATTCATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATACATTAGGCCTAGTATAACTGACATAGCAAGGCCTATTCATTT  340

seq1  TTCCCTTTTACCAGTAATTGACTTCAACCAGTCTAGCTCTGGGAACTTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTTACCAGTAATTGACTTCAACCAGTCTAGCTCTGGGAACTTTC  390

seq1  TTACTGTTTGTGGAAAGAAAACATAAAAGTTCTACTTCACTCTATTGCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTTGTGGAAAGAAAACATAAAAGTTCTACTTCACTCTATTGCAA  440

seq1  GCAGTTAATTTTTGTCTCCTAACACCACTTCCTGTCAATCTCAGCCCTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAATTTTTGTCTCCTAACACCACTTCCTGTCAATCTCAGCCCTCC  490

seq1  TTCTTTCACTCTAGCCACATGCTCCTTCCTTAACAAACAGTTCATATTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCACTCTAGCCACATGCTCCTTCCTTAACAAACAGTTCATATTCC  540

seq1  ATCTTCGTCAGAACTTTATTTTAAAATATGAAAACTATGAATCCCCAGTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGTCAGAACTTTATTTTAAAATATGAAAACTATGAATCCCCAGTC  590

seq1  TTCATCAGCTATTTGGAAAGTGTGGCTTTCCCAGGCAAGCTGGAGACTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGCTATTTGGAAAGTGTGGCTTTCCCAGGCAAGCTGGAGACTGT  640

seq1  GCTGCAGGGAGCTTGTAACACGTGGGAGTTCAGGTCATGAGAACCAGGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGGAGCTTGTAACACGTGGGAGTTCAGGTCATGAGAACCAGGCT  690

seq1  GCATGGCTGCCCTTCAGGGGTTCCTCCTCCTTGTTCCTCTCTGACACTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCTGCCCTTCAGGGGTTCCTCCTCCTTGTTCCTCTCTGACACTGG  740

seq1  TTTATTCAGAATGTCATCTACTTTCAGAAAGTCATTGAGTGCCAGGTGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGAATGTCATCTACTTTCAGAAAGTCATTGAGTGCCAGGTGAA  790

seq1  AAATTCAAGGACCTGAGCCAAAATTTGGGTTTCTATGTTGTAGGACTCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGGACCTGAGCCAAAATTTGGGTTTCTATGTTGTAGGACTCAA  840

seq1  ACCCAGGTACCATGCTGTTCCCTGTTTTATCCTCTATTGTGAATGAAGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTACCATGCTGTTCCCTGTTTTATCCTCTATTGTGAATGAAGTG  890

seq1  TTTGTTCTTTCATGTAAGTTTTTTTTTTCCTGAAAGTAGAATAGAAAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTCATGTAAGTTTTTTTTTTCCTGAAAGTAGAATAGAAAAAA  940

seq1  AATACAACAAACAAACAAACAAACAAACAAAATCCAAGAGACCTCTGACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAACAAACAAACAAACAAACAAACAAAATCCAAGAGACCTCTGACA  990

seq1  TGAAACCCCATCCACCATCAATGATAACCTTATTATAAGAAATTCAAATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCCCATCCACCATCAATGATAACCTTATTATAAGAAATTCAAATT  1040

seq1  ATAAGAAATTCAAAACAAACAGTTATCTCTGTGGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAATTCAAAACAAACAGTTATCTCTGTGGAATTC  1079


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