BAC Information

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BAC

Clone NameB6Ng01-209A07
Chromosome3 (Build37)
Map Location 64,637,344 - 64,638,429
singlet/doubletsinglet
Overlap gene4933425M15Rik
Upstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918
Downstream geneLOC670110, Kcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209A07.bB6Ng01-209A07.g
ACCGA027746GA027747
length1,1191,194
definitionB6Ng01-209A07.b B6Ng01-209A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cacctatttaaggggagaagggatccgccggaattctgctgttaaacctg
ctaaatccttatagtcatctaagctatttctgaacaaaggtttctgggca
atgctcccagggacaataaactcacaggtttgtattggagcttcagaagt
tgtgatttttgcagacccccaggtaatgcagtcaactttggagaaggcaa
gaggagcaggacaagcatgtctacattgtcatggtgcattccagaggtat
caccaagttgctgtcagcttcaagagtttccagtggctctcttaccaaga
gtcacaggtttttcagtacaaggagattttatcaaagcatccaaaaagac
ctggtgtaagaggcactttccatttccatttcaactgatcatgagaatca
tactctggacgatttctatcgttattacttatttttgcatatgtgtgtga
tgtgaatttatgcatacacatgattctatgtgtgtggatacatgggcaca
tatgtgaaaatgcatgtgtaaacccagggttggcactggcagccattctt
ggtcacttcctaccttactcattaagtgaacgtaggacatgggctagtta
agctaagcagcatgttctgaaattataaaacatggagttatatcgcactc
acttggaatttaataggttctaaagatccaaactctggttctcctgcttg
atccactcagctatcaccctgttttaatagagtcaaagccctgcacaact
gactcatgattcagtgttcgcaagaaaagggtgtttcagagacatgagta
tgtattctgtaccccaagctacatcagagtgaagcagttggtcactgaat
gagccagttcttatactcagttatatggaaatgcaagcatgctcttcttt
attcatgtccttgtggtgctaagtaacaattgctattagtgggtaaaatc
cttccctaggctccaacagacaaggctgaaataaagttcagtcagtccat
gttagagtccaataatcaagttgaaattggctgggttattctgacctcag
gagttagatttagagagataacagctacttttcccaaaccaggttagttt
catttggcacagcaataga
gaattctcacctgaggaattccgaatggcagagaagtacctgaaaaaatg
gtcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagctcgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaatgaatttatgaaatccctaggcattt
ggatggacctggagggtatcatcctgagtgaagtaacccaatcataaagg
aactcgcacaatatgtactcactgataagtggataatagcccagaaactt
aggataccctagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgacatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttcgctgaaa
ggacccagatatagctctctcttgtgagactatgccggggccctatcaaa
cacagaagtggatgatcaccagtcagctattggatgggtcacacggcccc
ctatggaggagctagagaaattacccaaggagctaaagggaacttgcaac
cctattaggtggacacatatgaactaaccagttactgggagctcttgtcc
tctagctgcatatgttattcaaagaatgcctactcgcatccatgccaaag
agagccattgaactacaactttatatgcccagttaaggtatcgcaatgtc
caaaaaggtgaatgggtggactaagggcgaatgtggacataccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64637344_64638429
seq2: B6Ng01-209A07.b_31_1119

seq1  GAATTCTGCTGTTAAACCTGCTAAATCCTTATAGTCATCTAAGCTATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGTTAAACCTGCTAAATCCTTATAGTCATCTAAGCTATTTC  50

seq1  TGAACAAAGGTTTCTGGGCAATGCTCCCAGGGACAATAAACTCACAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAAGGTTTCTGGGCAATGCTCCCAGGGACAATAAACTCACAGGTT  100

seq1  TGTATTGGAGCTTCAGAAGTTGTGATTTTTGCAGACCCCCAGGTAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGGAGCTTCAGAAGTTGTGATTTTTGCAGACCCCCAGGTAATGCA  150

seq1  GTCAACTTTGGAGAAGGCAAGAGGAGCAGGACAAGCATGTCTACATTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTTTGGAGAAGGCAAGAGGAGCAGGACAAGCATGTCTACATTGTC  200

seq1  ATGGTGCATTCCAGAGGTATCACCAAGTTGCTGTCAGCTTCAAGAGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCATTCCAGAGGTATCACCAAGTTGCTGTCAGCTTCAAGAGTTTC  250

seq1  CAGTGGCTCTCTTACCAAGAGTCACAGGTTTTTCAGTACAAGGAGATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTCTCTTACCAAGAGTCACAGGTTTTTCAGTACAAGGAGATTTT  300

seq1  ATCAAAGCATCCAAAAAGACCTGGTGTAAGAGGCACTTTCCATTTCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCATCCAAAAAGACCTGGTGTAAGAGGCACTTTCCATTTCCATT  350

seq1  TCAACTGATCATGAGAATCATACTCTGGACGATTTCTATCGTTATTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGATCATGAGAATCATACTCTGGACGATTTCTATCGTTATTACTT  400

seq1  ATTTTTGCATATGTGTGTGATGTGAATTTATGCATACACATGATTCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCATATGTGTGTGATGTGAATTTATGCATACACATGATTCTATG  450

seq1  TGTGTGGATACATGGGCACATATGTGAAAATGCATGTGTAAACCCAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGATACATGGGCACATATGTGAAAATGCATGTGTAAACCCAGGGT  500

seq1  TGGCACTGGCAGCCATTCTTGGTCACTTCCTACCTTACTCATTAAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTGGCAGCCATTCTTGGTCACTTCCTACCTTACTCATTAAGTGAA  550

seq1  CGTAGGACATGGGCTAGTTAAGCTAAGCAGCATGTTCTGAAATTATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGACATGGGCTAGTTAAGCTAAGCAGCATGTTCTGAAATTATAAAA  600

seq1  CATGGAGTTATATCGCACTCACTTGGAATTTAATAGGTTCTAAAGATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTTATATCGCACTCACTTGGAATTTAATAGGTTCTAAAGATCCA  650

seq1  AACTCTGGTTCTCCTGCTTGATCCACTCAGCTATCACCCTGTTTTAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGTTCTCCTGCTTGATCCACTCAGCTATCACCCTGTTTTAATAG  700

seq1  AGTCAAAGCCCTGCACAACTGACTCATGATTCAGTGTTCGCAAGAAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAGCCCTGCACAACTGACTCATGATTCAGTGTTCGCAAGAAAAGG  750

seq1  GTGTTTCAGAGACATGAGTATGTATTCTGTACCCCAAGCTACATCAGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCAGAGACATGAGTATGTATTCTGTACCCCAAGCTACATCAGAGT  800

seq1  GAAGCAGTTGGTCACTGAATGAGCCAGTTCTTATACTCAGTTATATGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTTGGTCACTGAATGAGCCAGTTCTTATACTCAGTTATATGGAA  850

seq1  ATGCAAGCATGCTCTTC-TTATTCATGTCCTTGTGGTGCTAAGTAACAAT  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGCAAGCATGCTCTTCTTTATTCATGTCCTTGTGGTGCTAAGTAACAAT  900

seq1  TGCTATTAGTGGGTAAAATCCTTCCCTAGGCTCCAACAGACAAGGCTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTAGTGGGTAAAATCCTTCCCTAGGCTCCAACAGACAAGGCTGAA  950

seq1  ATAAAGTTCAGTCAGT-CATGTTAGAGTTCCATAAATCAAGTTGAAATTG  998
      |||||||||||||||| |||||||||| ||||  ||||||||||||||||
seq2  ATAAAGTTCAGTCAGTCCATGTTAGAG-TCCAATAATCAAGTTGAAATTG  999

seq1  GCTGGGTTA-TCTGACCTCAGGAGTTAGAATTAGAGAGATAACAGCTACA  1047
      ||||||||| ||||||||||||||||||| ||||||||||||||||||| 
seq2  GCTGGGTTATTCTGACCTCAGGAGTTAGATTTAGAGAGATAACAGCTACT  1049

seq1  TTTCCCAAA-CAAGTTAGTTTCAATTGGCACAGCAATAGA  1086
      ||||||||| || |||||||||| ||||||||||||||||
seq2  TTTCCCAAACCAGGTTAGTTTCATTTGGCACAGCAATAGA  1089