BAC Information

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BAC

Clone NameB6Ng01-212D17
Chromosome3 (Build37)
Map Location 150,783,125 - 150,936,605
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212D17.bB6Ng01-212D17.g
ACCGA030079GA030080
length1,2051,157
definitionB6Ng01-212D17.b B6Ng01-212D17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,935,421 - 150,936,605)(150,783,125 - 150,784,271)
sequence
gaattctttcctctctccctccctccctccttccctccctgcctgcccca
cctccactctttacttctctggttgctgctaacttccctttgataatgtc
ctcaaagtgtcttgttcatattaccgctctgagagatgcagcaatgcttt
gtctatgctggttagtgatagtaagaaaagcaaaccaagccacaaatgca
gtgctttccccgcaaacagcctcatcatacgctgctcggcaggaatgagg
tctgattgactggttgttttaaatatattgagttcatttgggtacactaa
taatgattttctattaatactattatatgtcaactatattagttgtctaa
atctatcttcaattttttttcttacctaacaggtctatcttaccactaca
cctctttccaatggtgtataagcaaggtgaagaacaatacgaaattaatt
tgatttatcgtatacgcatattatatgcattagataaaagattagccaac
ttttccaatcaattaccattgtgtcttgagaaaagttaaattgtaaattc
aaaaggcatgatttattattgtagaactgggagagttgtttattcagtgg
tttttgttagtggatgccaatgatcccagtgggaattgttagaagacaag
caaacaggtaagatttacacctgctcctggatgagataacagaactcagg
tgaatcccctgtgcaaaagattagataggttagcgctaatagcctagaaa
actctattttccagtttattccgacttaactctggggacataaaacttca
atttgctggttgagcagaggtcatgaggtgcaatgcgagcagagttacag
ccaggtttcaagatgtctgaagtggctgtcatttgtaaatccaaaagtgt
agggttagagtgttataaatggaagaactaccactaatttggtaccttga
ggaaatgtagtttctttcgtattttatttaagtttttttctcttaatcat
ttaccaacctactcatgggttaccaccactataatctttcccccgatacc
tcatcttctaattccattgagcaagtaggggccctctgggtatcaccctc
accctgtgcacctctccagttctaatggtgaggctaagtatatccttcct
atctgagaggctaagacaaaagcagttcagcctagaacataattctcatg
tgcag

gaattcatcatataccagggaaaagccaaaacagcgcttaaaaatatcac
ttaaattattgagataagaaagactggggatattagatggatttttaaaa
ggatgaatgagttttgtagatctctaaaaccacaagaaattgggccttct
gacatggaaactaatcagaaagaaaacagtaaaacagctcagaaggcagt
tttttcctaagaatgatgcttttggtaccttcttccaactgatgcatcac
tccacccctcccaagaaaacaagaagaccttacagtggcctatagtaaca
gaaattgaactgattttaactatttgagattggtgataaattttcttcag
taaaataaagacaaaaacgggaagggggaagaaaagagaaagagcagggg
gtaagatttcattgctttaatagggagcatccagcttttgagcttagttg
aaaatcactgctcagtaaaaacttattgaaagaaagattgaactgttaga
tgaattattaatgtgttctcttttacgatttcaaataatcacatttaact
tgacagcaggacaccaaaatatgtaagagcagcataccgaaatagcaaga
atacagagattggaagtctatagacccatgtttaaaatgtaagaactcac
ctcacctttgttccttgtcagtccatcacagccaacatggagggcaagga
tgcattagaaaaagagcacgagaaaagtctatgcttcatcagtatttttg
tattgcaagttattatgcaattgaagctatttagccatccctgtatagca
tatgtatcaatatactagctctttcatgttataggctaagaagttcttcc
atgacaattacatcaccagtgaagttcttaataactaaaagagatttatc
tacaaggtagctatgacagatttcaacagacagtatttgtgattatactg
tacaatctacatgaacatgatgaagatgatgaatatatacatggtgtggt
gtgaaagaggagagaggacagagaggaggattcaggaaaacatatgggaa
atatagaagtttgttgcatatatcactttgggatgttttcctcatctctc
tctcaaggcattataccacactgggtcgtgtgcatctggttctacggaac
aaatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150935421_150936605
seq2: B6Ng01-212D17.b_48_1252 (reverse)

seq1  CTGCACATGGGA--TATGTTCTA-GCTGGACTGC-TTTGTC-TAGC--CT  43
      ||||||||| ||  ||||||||| |||| ||||| |||||| ||||  ||
seq2  CTGCACATGAGAATTATGTTCTAGGCTGAACTGCTTTTGTCTTAGCCTCT  50

seq1  CAG-TAGGAAAGGATATACTTAGCCTCAC--ATAGACTT---GAGGTGC-  86
      ||| |||| ||||||||||||||||||||   ||||  |   ||||||| 
seq2  CAGATAGG-AAGGATATACTTAGCCTCACCATTAGAACTGGAGAGGTGCA  99

seq1  CAGGGTG-GGGTGATACCCAG-GGGCCCCTACCTGCTCAATGGAA-TAGA  133
      ||||||| ||||||||||||| |||||||||| |||||||||||| ||||
seq2  CAGGGTGAGGGTGATACCCAGAGGGCCCCTACTTGCTCAATGGAATTAGA  149

seq1  GGATGAGGTATCGGGGGAAGGATTATAGGTGGTGGTAA-CCATGAGTAGG  182
       |||||||||||||||||| ||||||| |||||||||| |||||||||||
seq2  AGATGAGGTATCGGGGGAAAGATTATA-GTGGTGGTAACCCATGAGTAGG  198

seq1  TTGTTAAATGAATAAGA-AAAAAAACCTAAATAAAATACGAAAGAAACTA  231
      ||| ||||||| ||||| |||||||| |||||||||||||||||||||||
seq2  TTGGTAAATGATTAAGAGAAAAAAACTTAAATAAAATACGAAAGAAACTA  248

seq1  CATTTCCTC-AGGTACC-AATTAGTGTTGGTTCTTCCATTTATAACACTC  279
      ||||||||| ||||||| |||||||| | |||||||||||||||||||||
seq2  CATTTCCTCAAGGTACCAAATTAGTGGTAGTTCTTCCATTTATAACACTC  298

seq1  TAACCCTACACTTTTGGA-TTACAAATGACAGCCACTTCAGACATCTTGA  328
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAACCCTACACTTTTGGATTTACAAATGACAGCCACTTCAGACATCTTGA  348

seq1  AACCTGGCTGTAACTCTGCTCGCATTGCACCTCATGACCTCTGCTCAACC  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGCTGTAACTCTGCTCGCATTGCACCTCATGACCTCTGCTCAACC  398

seq1  AGCAAATTGAAGTTTTATGTCCCCAGAGTTAAGTCGGAATAAACTGGAAA  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTGAAGTTTTATGTCCCCAGAGTTAAGTCGGAATAAACTGGAAA  448

seq1  ATAGAGTTTTCTAGGCTATTAGCGCTAACCTATCTAATCTTTTGCACAGG  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTTTCTAGGCTATTAGCGCTAACCTATCTAATCTTTTGCACAGG  498

seq1  GGATTCACCTGAGTTCTGTTATCTCATCCAGGAGCAGGTGTAAATCTTAC  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCACCTGAGTTCTGTTATCTCATCCAGGAGCAGGTGTAAATCTTAC  548

seq1  CTGTTTGCTTGTCTTCTAACAATTCCCACTGGGATCATTGGCATCCACTA  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGCTTGTCTTCTAACAATTCCCACTGGGATCATTGGCATCCACTA  598

seq1  ACAAAAACCACTGAATAAACAACTCTCCCAGTTCTACAATAATAAATCAT  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACCACTGAATAAACAACTCTCCCAGTTCTACAATAATAAATCAT  648

seq1  GCCTTTTGAATTTACAATTTAACTTTTCTCAAGACACAATGGTAATTGAT  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTGAATTTACAATTTAACTTTTCTCAAGACACAATGGTAATTGAT  698

seq1  TGGAAAAGTTGGCTAATCTTTTATCTAATGCATATAATATGCGTATACGA  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGTTGGCTAATCTTTTATCTAATGCATATAATATGCGTATACGA  748

seq1  TAAATCAAATTAATTTCGTATTGTTCTTCACCTTGCTTATACACCATTGG  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAAATTAATTTCGTATTGTTCTTCACCTTGCTTATACACCATTGG  798

seq1  AAAGAGGTGTAGTGGTAAGATAGACCTGTTAGGTAAGAAAAAAAATTGAA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGTGTAGTGGTAAGATAGACCTGTTAGGTAAGAAAAAAAATTGAA  848

seq1  GATAGATTTAGACAACTAATATAGTTGACATATAATAGTATTAATAGAAA  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATTTAGACAACTAATATAGTTGACATATAATAGTATTAATAGAAA  898

seq1  ATCATTATTAGTGTACCCAAATGAACTCAATATATTTAAAACAACCAGTC  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATTAGTGTACCCAAATGAACTCAATATATTTAAAACAACCAGTC  948

seq1  AATCAGACCTCATTCCTGCCGAGCAGCGTATGATGAGGCTGTTTGCGGGG  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGACCTCATTCCTGCCGAGCAGCGTATGATGAGGCTGTTTGCGGGG  998

seq1  AAAGCACTGCATTTGTGGCTTGGTTTGCTTTTCTTACTATCACTAACCAG  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTGCATTTGTGGCTTGGTTTGCTTTTCTTACTATCACTAACCAG  1048

seq1  CATAGACAAAGCATTGCTGCATCTCTCAGAGCGGTAATATGAACAAGACA  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAAAGCATTGCTGCATCTCTCAGAGCGGTAATATGAACAAGACA  1098

seq1  CTTTGAGGACATTATCAAAGGGAAGTTAGCAGCAACCAGAGAAGTAAAGA  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGACATTATCAAAGGGAAGTTAGCAGCAACCAGAGAAGTAAAGA  1148

seq1  GTGGAGGTGGGGCAGGCAGGGAGGGAAGGAGGGAGGGAGGGAGAGAGGAA  1178
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGTGGGGCAGGCAGGGAGGGAAGGAGGGAGGGAGGGAGAGAGGAA  1198

seq1  AGAATTC  1185
      |||||||
seq2  AGAATTC  1205


seq1: chr3_150783125_150784271
seq2: B6Ng01-212D17.g_68_1224

seq1  GAATTCATCATATACCAGGGAAAAGCCAAAACAGCGCTTAAAAATATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATATACCAGGGAAAAGCCAAAACAGCGCTTAAAAATATCAC  50

seq1  TTAAATTATTGAGATAAGAAAGACTGGGGATATTAGATGGATTTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATTGAGATAAGAAAGACTGGGGATATTAGATGGATTTTTAAAA  100

seq1  GGATGAATGAGTTTTGTAGATCTCTAAAACCACAAGAAATTGGGCCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATGAGTTTTGTAGATCTCTAAAACCACAAGAAATTGGGCCTTCT  150

seq1  GACATGGAAACTAATCAGAAAGAAAACAGTAAAACAGCTCAGAAGGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGAAACTAATCAGAAAGAAAACAGTAAAACAGCTCAGAAGGCAGT  200

seq1  TTTTTCCTAAGAATGATGCTTTTGGTACCTTCTTCCAACTGATGCATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTAAGAATGATGCTTTTGGTACCTTCTTCCAACTGATGCATCAC  250

seq1  TCCACCCCTCCCAAGAAAACAAGAAGACCTTACAGTGGCCTATAGTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCTCCCAAGAAAACAAGAAGACCTTACAGTGGCCTATAGTAACA  300

seq1  GAAATTGAACTGATTTTAACTATTTGAGATTGGTGATAAATTTTCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGAACTGATTTTAACTATTTGAGATTGGTGATAAATTTTCTTCAG  350

seq1  TAAAATAAAGACAAAAACGGGAAGGGGGAAGAAAAGAGAAAGAGCAGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAGACAAAAACGGGAAGGGGGAAGAAAAGAGAAAGAGCAGGGG  400

seq1  GTAAGATTTCATTGCTTTAATAGGGAGCATCCAGCTTTTGAGCTTAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATTTCATTGCTTTAATAGGGAGCATCCAGCTTTTGAGCTTAGTTG  450

seq1  AAAATCACTGCTCAGTAAAAACTTATTGAAAGAAAGATTGAACTGTTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACTGCTCAGTAAAAACTTATTGAAAGAAAGATTGAACTGTTAGA  500

seq1  TGAATTATTAATGTGTTCTCTTTTACGATTTCAAATAATCACATTTAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATTAATGTGTTCTCTTTTACGATTTCAAATAATCACATTTAACT  550

seq1  TGACAGCAGGACACCAAAATATGTAAGAGCAGCATACCGAAATAGCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAGGACACCAAAATATGTAAGAGCAGCATACCGAAATAGCAAGA  600

seq1  ATACAGAGATTGGAAGTCTATAGACCCATGTTTAAAATGTAAGAACTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGATTGGAAGTCTATAGACCCATGTTTAAAATGTAAGAACTCAC  650

seq1  CTCACCTTTGTTCCTTGTCAGTCCATCACAGCCAACATGGAGGGCAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTTGTTCCTTGTCAGTCCATCACAGCCAACATGGAGGGCAAGGA  700

seq1  TGCATTAGAAAAAGAGCACGAGAAAAGTCTATGCTTCATCAGTATTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGAAAAAGAGCACGAGAAAAGTCTATGCTTCATCAGTATTTTTG  750

seq1  TATTGCAAGTTATTATGCAATTGAAGCTATTTAGCCATCCCTGTATAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAAGTTATTATGCAATTGAAGCTATTTAGCCATCCCTGTATAGCA  800

seq1  TATGTATCAATATACTAGCTCTTTCATGTTATAGGCTAAGAAGTTCTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCAATATACTAGCTCTTTCATGTTATAGGCTAAGAAGTTCTTCC  850

seq1  ATGACAATTACATCACCAGTGAAGTTCTTAATAACTAAAAGAGATTTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATTACATCACCAGTGAAGTTCTTAATAACTAAAAGAGATTTATC  900

seq1  TACAAGGTAGCTATGACAGATTTCAACAGACAGTATTTGTGATTATACTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGTAGCTATGACAGATTTCAACAGACAGTATTTGTGATTATACTG  950

seq1  TACAATCTACATGAACATGATGAAGATGATGAATATATACAT-GTGT-GT  998
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  TACAATCTACATGAACATGATGAAGATGATGAATATATACATGGTGTGGT  1000

seq1  GTGAAAGA-GAGAGA-GACAGAGAG--AGAATCA-GAAAACATAT-GGAA  1042
      |||||||| |||||| |||||||||   || ||| |||||||||| ||||
seq2  GTGAAAGAGGAGAGAGGACAGAGAGGAGGATTCAGGAAAACATATGGGAA  1050

seq1  ATATAGAAGTTTGTTTGCATATATCACTTT-GGATGTTTTTCCTCATCTC  1091
      ||||||||||||| |||||||||||||||| ||||| |||||||||||||
seq2  ATATAGAAGTTTG-TTGCATATATCACTTTGGGATG-TTTTCCTCATCTC  1098

seq1  T-TCTCAAAGCCAATTATACAACACTGGTTC--GTGCATCT-GTTCTAC-  1136
      | |||||| ||  ||||||| ||||||| ||  |||||||| ||||||| 
seq2  TCTCTCAAGGC--ATTATACCACACTGGGTCGTGTGCATCTGGTTCTACG  1146

seq1  GACAAAATGTA  1147
      ||  |||||||
seq2  GAACAAATGTA  1157


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