BAC Information

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BAC

Clone NameB6Ng01-213L04
Chromosome3 (Build37)
Map Location 125,752,834 - 125,753,611
singlet/doubletsinglet
Overlap genenone
Upstream geneNdst4, Ugt8a
Downstream geneArsj, Camk2d, Ank2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213L04.bB6Ng01-213L04.g
ACCGA031148GA031149
length1,1931,035
definitionB6Ng01-213L04.b B6Ng01-213L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggcagtctcactctctctttaagtgaacttgggcctctgtaga
tagtggaggagtaaaggtgaagtgtaaagccccttctccactttccatcc
caaacaacctcttgacaatgatttagagttttattacctccatgaattta
aggcaatctctgttcaacaaataacttataactaaattactcaagcagac
ttctggggtctcttattgtaagagtaaataccttacaaaaatttttccta
gaagccactcaacaaataagctgcagtattgacaacaacaaaaattgaaa
gaagagaagagatttttgtattgatctggctgcattatttgaaatgtcca
tctgttaataaagaataataatatgcaaagaaataactaagtataatcta
aaaaataaacaaaatactcaatagaaattctgcttgaagaaagcttaata
ttcaattcactactcaaagtctttaaaataggtatcaaagaactaaacaa
gaaagcattgttatctgtaatagaaaatatcaatgaagagttgatttaaa
acatagtaattatgagattgaaatgtattcagtttactacagcagcttaa
ctgaagagattaaccaaagatctgaataaatatacttgaaataaaaacct
gcaaattggaagagaggcagccgagattatactcttttttttccccccac
acaccaaaaacggtattcctgaagtctttttttttcttttttcttttatt
gggtatttatttcatttacatttccaatgctatcccaaaagtctcccaca
tgatcccccacccattcacctacccacccactcccacttcttggccctgg
cgttcccctgtcctgaggcatataagtttgcacgaccaatgggtctatcc
cctgatggccgactaggccatcttctgattcatatgcagctagagacaca
agctccaggggtttattagttagttcatattgttgttccacctattagga
ttgcagatcctttcagctctggtactttctctagctcctccatggggccc
tgtgatccatcccatagctgactaggagcattcacttctgtgtttgctag
gcccggcatagtctccagagacaggctatatcagtcctcagcaatctggc
tagttatggccaatgagttccagtgcttttggtaaagacgcgg

gaattcaaagtaattctgccatctgttccttagctctaccatttcagcct
ggctcctacagctcctttagaaatctgagtttatagagccacggaattat
tggtaactccagaaatatactgttggtttctttgcatatatatccaaaag
agggttgatatccacccagctcctctgctttaatgtttattacaaatcta
aagtttgtgtgtcttttatttgggaactatatgttctaagtgaaataata
aacctcagattaatatttaccacaacacaatattttactgttttttccaa
tttttattagatattttcttcatttacatttcaaatgctatccagaaagt
cccctatacccccccccacaccctgctcccctacccacccactcccactt
cttggtcctggcattcccatgtattggggcatataaattttgcaacacca
aggggcctctcttcccaatgatgtctgactaggccatcttctgctacata
tgcagctagagacacgagctctgggggtactggttagttcatattgttgt
tccaactatcaggttgcagaccccttcagctccttgagtactttctctag
ctcctccattggggaccctgtgttccatccaatagctgactatgagcatc
cacttctgtatttgctaggcactggcatagtctcagaaaattaaataata
ctattaaaaaatggggcacagagctaaacaaagaattctcaactgagaaa
taccaaatggctgagaagcacctacaaatgttcaacatccttaatcatta
gggaaatgtaaatcaaaacaaccctgagatttcatctaacaccagtcaga
atggctaagatcaaaaattcagtgacagcagatgctggcaaggatgtgga
gaaaagaggacactcctccactgttggtgggattgcaagcttgtacaacc
acttctggaaatcagtctggcggttcctcagaaaattggacatagtacta
cgggaagatcaagcatacttctcctgagcatatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125752834_125753611
seq2: B6Ng01-213L04.g_65_861

seq1  GAATTCAAAGTAAT--------------------TCTACCATTTCAGCCT  30
      ||||||||||||||                    ||||||||||||||||
seq2  GAATTCAAAGTAATTCTGCCATCTGTTCCTTAGCTCTACCATTTCAGCCT  50

seq1  GGCTCCTACAGCTCCTTTAGAAATCTGAGTTTATAGAGCCACGGAATTAT  80
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTACAGCTCCTTTAGAAATCTGAGTTTATAGAGCCACGGAATTAT  100

seq1  TGGTAACTCCAGAAATATACTGTTGGTTTCTTTGCATATATATCCAAAAG  130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACTCCAGAAATATACTGTTGGTTTCTTTGCATATATATCCAAAAG  150

seq1  AGGGTTGATATCCACCCAGCTCCTCTGCTTTAATGTTTATTACAAATCTA  180
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGATATCCACCCAGCTCCTCTGCTTTAATGTTTATTACAAATCTA  200

seq1  AAGTTTGTGTGTCTTTTATTTGGGAACTATATGTTCTAAGTGAAATAATA  230
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTGTGTCTTTTATTTGGGAACTATATGTTCTAAGTGAAATAATA  250

seq1  AACCTCAGATTAATATTTACCACAACACAATATTTTACTGTTTTTTCCAA  280
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAGATTAATATTTACCACAACACAATATTTTACTGTTTTTTCCAA  300

seq1  TTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCAGAAAGT  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCAGAAAGT  350

seq1  CCCCTATACCCCCCCCCACACCCTGCTCCCCTACCCACCCACTCCCACTT  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATACCCCCCCCCACACCCTGCTCCCCTACCCACCCACTCCCACTT  400

seq1  CTTGGTCCTGGCATTCCCATGTATTGGGGCATATAAATTTTGCAACACCA  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCCTGGCATTCCCATGTATTGGGGCATATAAATTTTGCAACACCA  450

seq1  AGGGGCCTCTCTTCCCAATGATGTCTGACTAGGCCATCTTCTGCTACATA  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCTCTCTTCCCAATGATGTCTGACTAGGCCATCTTCTGCTACATA  500

seq1  TGCAGCTAGAGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGT  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTAGAGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGT  550

seq1  TCCAACTATCAGGTTGCAGACCCCTTCAGCTCCTTGAGTACTTTCTCTAG  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTATCAGGTTGCAGACCCCTTCAGCTCCTTGAGTACTTTCTCTAG  600

seq1  CTCCTCCATTGGGGACCCTGTGTTCCATCCAATAGCTGACTATGAGCATC  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCATTGGGGACCCTGTGTTCCATCCAATAGCTGACTATGAGCATC  650

seq1  CACTTCTGTATTTGCTAGGCACTGGCATAGTCTCAGAAAATTAAATAATA  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTATTTGCTAGGCACTGGCATAGTCTCAGAAAATTAAATAATA  700

seq1  CTATTAAAAAATGGGGCACAGAGCTAAACAAAGAATTCTCAACTGAGAAA  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAAAATGGGGCACAGAGCTAAACAAAGAATTCTCAACTGAGAAA  750

seq1  TACCAAATGGCTGAGAAGCACCTACAAAATGTTCAACATCCTTAATCA  778
      ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TACCAAATGGCTGAGAAGCACCTAC-AAATGTTCAACATCCTTAATCA  797


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