BAC Information

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BAC

Clone NameB6Ng01-214H10
Chromosome3 (Build37)
Map Location 59,687,417 - 59,688,529
singlet/doubletsinglet
Overlap genenone
Upstream geneClrn1, LOC100040416, Gpr171, P2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803
Downstream geneC130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214H10.bB6Ng01-214H10.g
ACCGA031705GA031706
length1,1781,112
definitionB6Ng01-214H10.b B6Ng01-214H10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggtatactgaatggcagagtagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagaa
tccacctcactccagtcagaatggctaagataaagaattcaggtgacagc
agatgctggtgaggatgtgtagaaagaggaacactcctccattgttggtg
ggatccaagcttgtacaactactctggaaatcagtctggcagttcctcag
aaaattggacatagtactatgggaggatcctgcaatacctctcctgggca
tatatccagaagatgttccaactgttaagaaagacacatgctcaactatg
ttcatagcagccttatttgtaatagccagaagcaggaaggaacccagacg
cctgtcaacttaggaatggatacagaaaacatggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctgcagggcatcatcctgagtgaggcaacccaatcacaaaa
gtactcaaatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgtgaaacacatgaaactgaag
aagaatgaagacctaagtgtgaacacttttccccttcttagaattggaaa
caaaacagccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagacactgccatatccaggaatccatcccatagtc
ggcctccaaatgctgacaccattacatacactagcaagattctcctgaaa
ggaccctgatatagctgtctcttgtaagactatgctgggacctagcaaac
acataagtgaatgctcacagttagctatttgatggatcatagagccccca
gtggaggagctagagaaagtaccccaggagctaaagggatctgcaacctt
atacgtggacacaatatgactaacagtacctccaaatctcatgtctctag
ctgcatatgtatcaaagatggcctactgcatcagtggaagaagtggccat
tgtcgtgcaacctataattcctcagttacagggaacttcagtgcccaaaa
gtgggagattagtggtttaggcgggagt
gaattctgttgagaggttggggtactttaaaacacatcctgggctatata
ttcgggaacgaataaataaacccaactgtagatcctgactcttagcacag
actgtgagaataaggaagacacagtgagctaagttagaaataagagagct
gtaaaggagaaagaagacagaaaactcagagaagaaaatagaaacatgtt
cttcacagatggtggagtaaatgctcagagcctgtcacaaactattactt
tcatgctattttgatttctggggaattgtgatgttctctaatctagtgct
tggtgaaccagatgactcaatgataaagataatcctgtgttcaaccccag
aaactcacataaaggtggaagggaaatcctgactccataaagttgtcctc
ttctcacaggattgttgttttgggggcccatgccatatgcacacacacat
acacacatacacacacacacacacacacacacacacacacacacacacac
acacatgcacgcacacacacacacacacacacacacacacacaagcaaat
ttaaatactttcatttaaatgaaaaagccagaaaagaaataaaaactttc
attccttgttatcatatgagatacttggttttccatagggtttcagggat
aactttaaaacactgttagaacttttatagtttatcttttgagtctcaag
ttggttttttatatgaaataagagaccaatttcatccttttgtatctgta
gctgtagaaatttccttcccactgcatgttaccatctctattggagatta
cttgggtcaaaatatgtagatgtaacatgtatatgtctctattctgttgc
tatattttactctttctgttttatttttttccttctgctgagaaagattt
ctttttctcactcaacatatcttgattaaaacttccttcctctccagcca
gttcatccctacattccctttcttctggtttcactccttttcagtatctt
actaaaaagaacaggttatacatgataaaaaacaaaattgtttgctttat
ttgaaagaaagaaaattaaagattacagagaacattatgtagtctgtcta
gagggcaccaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59687417_59688529
seq2: B6Ng01-214H10.g_65_1176

seq1  GAATTCTGTTGAGAGGTTGGGGTACTTTAAAACACATCCTGGGCTATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGAGAGGTTGGGGTACTTTAAAACACATCCTGGGCTATATA  50

seq1  TTCGGGAACGAATAAATAAACCCAACTGTAGATCCTGACTCTTAGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGAACGAATAAATAAACCCAACTGTAGATCCTGACTCTTAGCACAG  100

seq1  ACTGTGAGAATAAGGAAGACACAGTGAGCTAAGTTAGAAATAAGAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAGAATAAGGAAGACACAGTGAGCTAAGTTAGAAATAAGAGAGCT  150

seq1  GTAAAGGAGAAAGAAGACAGAAAACTCAGAGAAGAAAATAGAAACATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGAGAAAGAAGACAGAAAACTCAGAGAAGAAAATAGAAACATGTT  200

seq1  CTTCACAGATGGTGGAGTAAATGCTCAGAGCCTGTCACAAACTATTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGATGGTGGAGTAAATGCTCAGAGCCTGTCACAAACTATTACTT  250

seq1  TCATGCTATTTTGATTTCTGGGGAATTGTGATGTTCTCTAATCTAGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTATTTTGATTTCTGGGGAATTGTGATGTTCTCTAATCTAGTGCT  300

seq1  TGGTGAACCAGATGACTCAATGATAAAGATAATCCTGTGTTCAACCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAACCAGATGACTCAATGATAAAGATAATCCTGTGTTCAACCCCAG  350

seq1  AAACTCACATAAAGGTGGAAGGGAAATCCTGACTCCATAAAGTTGTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACATAAAGGTGGAAGGGAAATCCTGACTCCATAAAGTTGTCCTC  400

seq1  TTCTCACAGGATTGTTGTTTTGGGGGCCCATGCCATATGCACACACACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAGGATTGTTGTTTTGGGGGCCCATGCCATATGCACACACACAT  450

seq1  ACACACATACACACACACACACACACACACACACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACACACACACACACACACACACACACACACACACACACACAC  500

seq1  ACACATGCACGCACACACACACACACACACACACACACACACAAGCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCACGCACACACACACACACACACACACACACACACAAGCAAAT  550

seq1  TTAAATACTTTCATTTAAATGAAAAAGCCAGAAAAGAAATAAAAACTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACTTTCATTTAAATGAAAAAGCCAGAAAAGAAATAAAAACTTTC  600

seq1  ATTCCTTGTTATCATATGAGATACTTGGTTTTCCATAGGGTTTCAGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGTTATCATATGAGATACTTGGTTTTCCATAGGGTTTCAGGGAT  650

seq1  AACTTTAAAACACTGTTAGAACTTTTATAGTTTATCTTTTGAGTCTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAAAACACTGTTAGAACTTTTATAGTTTATCTTTTGAGTCTCAAG  700

seq1  TTGGTTTTTTATATGAAATAAGAGACCAATTTCATCCTTTTGTATCTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTTATATGAAATAAGAGACCAATTTCATCCTTTTGTATCTGTA  750

seq1  GCTGTAGAAATTTCCTTCCCACTGCATGTTACCATCTCTATTGGAGATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAAATTTCCTTCCCACTGCATGTTACCATCTCTATTGGAGATTA  800

seq1  CTT-GGTCAAAATATGTAGATGTAACATGTATATGTCTCTATTCTGTTGC  849
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTCAAAATATGTAGATGTAACATGTATATGTCTCTATTCTGTTGC  850

seq1  TATATTTTACTCTTTCTGTTTTATTTTTTTCCTTCTGCTGAGAAAAGATT  899
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  TATATTTTACTCTTTCTGTTTTATTTTTTTCCTTCTGCTGAGAAAGATTT  900

seq1  C-TTTTCTCACTCAACATATCTTGATTAAAACTTCCTTCCCTCTCCAGCC  948
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTTTTCTCACTCAACATATCTTGATTAAAACTTCCTT-CCTCTCCAGCC  949

seq1  AGTTCATCCCTACATTCCCTTTCTTCTGGTTTCACTCCTTTTCAGTATCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATCCCTACATTCCCTTTCTTCTGGTTTCACTCCTTTTCAGTATCT  999

seq1  TACTAAAAAGAACAGGGTTATACATGAT-AAAAACAAAAT--GTTGCTAT  1045
      |||||||||||||| ||||||||||||| |||||||||||   ||||| |
seq2  TACTAAAAAGAACA-GGTTATACATGATAAAAAACAAAATTGTTTGCTTT  1048

seq1  A-TGAAAAGAAAGAAAAATAAAGATTACAAGAGAACATTATGTTAAGTCT  1094
      | |  |||||||||||| |||||||||| ||||||||||||||  |||||
seq2  ATTTGAAAGAAAGAAAATTAAAGATTAC-AGAGAACATTATGT--AGTCT  1095

seq1  GGTCAGAGGGCAACCCAAC  1113
      |   ||||||||  |||||
seq2  GTCTAGAGGGCA--CCAAC  1112