BAC Information

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BAC

Clone NameB6Ng01-215L20
Chromosome3 (Build37)
Map Location 83,390,219 - 83,391,039
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2, 1700028M03Rik, LOC100042007
Downstream geneLOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215L20.bB6Ng01-215L20.g
ACCGA032619GA032620
length1,244822
definitionB6Ng01-215L20.b B6Ng01-215L20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtaaaagaagccaatgagcaactttcccctgtgttctctgct
tcagctcctctctctaggttcctgcttgagattctacataggctcccctg
tggggactgctagttgcaaggtgaattaagcactctttccctagatgcta
actaggacaatgtgtatacatattaagagttttgctacatagggtggtgg
tgccacacactatatagtaaaaattccaatgccaggtacaggaaacctcc
cttgagttgttagttggaggaaatacaagaaatttccaataaataatatg
gactattgacattgcctttggttgccttccagaacttggacattcttgct
aaggataccacattatttggacagagaatttggaggaatcgaaccagggc
tcatctggaagcctccctgaggactggctctcagatattattggaaggtg
ctttgcacgcagcaaagggagaggagcagtgtgtaatcttacccagctat
aaagcccatgaaccacagcatcagttcctataagatatccctaatggcat
catagtgccacatttgtcttgtgggtagccaacaactgtttagttggact
taatgcttgctcaatgtgagggaatccatagctggtactgtaaacttaga
caactgtctatggttgaaaagttcatagaccctaaaggagaacttcctac
tgccatttttcctaaactattttaatttctaaccatattataaatactta
tacctacagtgtagctctcacccatcatcaatgaagcttccttttccaat
agatggtgactattacagagattcacaatgagtcaaagctcagagattaa
atgaatgttggatgttcaacaataacagatacgcttgcagtgcaacccct
acagctaaggaacaaatactattgcatgggaaggacaaaagaattgtacg
agccagaggagtggggacacctgctgatacatcacatcctttagatggtg
acatgggaaacaaaaaattctcatgaaatcttactactatgccttggtct
gaactaatactggcatagttaccacccagttcgtcaatagccaacaaagg
tcagggggctacttgtacaaaggtcctatcccttagagtaatgaagctac
atgggtggtcaaatggctactggaagaagacatagacctcagtcttcttc
gaaagtgaagatctatctacatagagcgtgatttgaaaactctg
gaattcagtcggacagccacacccttccttttcttattctgatcactttg
agttgtaagcctcagcaaactgaaggtttcagattggttagctagggagg
gactttttctgatagatagattccttctcaactcaagcctgtcacccaat
gcatgcttccaaattactctgcctcctaacagctaacgaacagattcagc
aaaggatactgagcagcagagtgaaggttcttggaaccggatctgatagc
taacaaatggctgctccgctggaatttacaatattgtttaacatctattt
gctaagatttttatttaaattttacattctccctacaaagctaatgtcta
ttcttacttaacaataataagtagaactgccaaggagacttccaactgaa
caaaacagatgaaacaatatacttggctccatcccaaaagggcactcaat
tgttcaagtgttcctaatctgcaaagacaaagaaatcatgacgacagcta
atgatgagagaaaacaccaaataagctagaatctgcagagggcagtggtt
gacactgagtaatctagcaaactagagggactggagacccgaagtggctt
ctgaggaaatactcagcaaacaaaaggaaatcagagcgatttgggtatac
aacatccagggtgtgcctaagagcggatgctgcagtatctgagggctgat
ggggaaaaataggaggactgggtgatggcccttagagccctggggtctcc
ttccacctgtgtctctacatagatgcccccaagttccaaggaagggaaag
aggaggggaggggaggggaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_83390219_83391039
seq2: B6Ng01-215L20.g_66_887

seq1  GAATTCAGTCGGACAGCCACACCCTTCCTTTTCTTATTCTGATCACTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCGGACAGCCACACCCTTCCTTTTCTTATTCTGATCACTTTG  50

seq1  AGTTGTAAGCCTCAGCAAACTGAAGGTTTCAGATTGGTTAGCTAGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAGCCTCAGCAAACTGAAGGTTTCAGATTGGTTAGCTAGGGAGG  100

seq1  GACTTTTTCTGATAGATAGATTCCTTCTCAACTCAAGCCTGTCACCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTCTGATAGATAGATTCCTTCTCAACTCAAGCCTGTCACCCAAT  150

seq1  GCATGCTTCCAAATTACTCTGCCTCCTAACAGCTAACGAACAGATTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTCCAAATTACTCTGCCTCCTAACAGCTAACGAACAGATTCAGC  200

seq1  AAAGGATACTGAGCAGCAGAGTGAAGGTTCTTGGAACCGGATCTGATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATACTGAGCAGCAGAGTGAAGGTTCTTGGAACCGGATCTGATAGC  250

seq1  TAACAAATGGCTGCTCCGCTGGAATTTACAATATTGTTTAACATCTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATGGCTGCTCCGCTGGAATTTACAATATTGTTTAACATCTATTT  300

seq1  GCTAAGATTTTTATTTAAATTTTACATTCTCCCTACAAAGCTAATGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGATTTTTATTTAAATTTTACATTCTCCCTACAAAGCTAATGTCTA  350

seq1  TTCTTACTTAACAATAATAAGTAGAACTGCCAAGGAGACTTCCAACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTTAACAATAATAAGTAGAACTGCCAAGGAGACTTCCAACTGAA  400

seq1  CAAAACAGATGAAACAATATACTTGGCTCCATCCCAAAAGGGCACTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGATGAAACAATATACTTGGCTCCATCCCAAAAGGGCACTCAAT  450

seq1  TGTTCAAGTGTTCCTAATCTGCAAAGACAAAGAAATCATGACGACAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAGTGTTCCTAATCTGCAAAGACAAAGAAATCATGACGACAGCTA  500

seq1  ATGATGAGAGAAAACACCAAATAAGCTAGAATCTGCAGAGGGCAGTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGAGAAAACACCAAATAAGCTAGAATCTGCAGAGGGCAGTGGTT  550

seq1  GACACTGAGTAATCTAGCAAACTAGAGGGACTGGAGACCCGAAGTGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAGTAATCTAGCAAACTAGAGGGACTGGAGACCCGAAGTGGCTT  600

seq1  CTGAGGAAATACTCAGCAAACAAAAGGAAATCAGAGCGATTTGGGTATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAATACTCAGCAAACAAAAGGAAATCAGAGCGATTTGGGTATAC  650

seq1  AACATCCAGGGTGTGCCTAAGAGCGGATGCTGCAGTATCTGAGGGCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCAGGGTGTGCCTAAGAGCGGATGCTGCAGTATCTGAGGGCTGAT  700

seq1  GGGGAAAAATAGGAGGACTGGGTGATGGCCCTTAGAGCCCTGGGGTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAATAGGAGGACTGGGTGATGGCCCTTAGAGCCCTGGGGTCTCC  750

seq1  TTCCACCTGTGTCTCTACATAGATGCCCCCAAGTTCCAAGGAAGGGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTGTGTCTCTACATAGATGCCCCCAAGTTCCAAGGAAGGGAAAG  800

seq1  AGGAGGGGA-GGGAGGGGAAAG  821
      ||||||||| ||||||||||||
seq2  AGGAGGGGAGGGGAGGGGAAAG  822