BAC Information

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BAC

Clone NameB6Ng01-215M15
Chromosome3 (Build37)
Map Location 74,626,433 - 74,627,410
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667425, LOC619764, LOC667434, LOC100041551, EG667459
Downstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215M15.bB6Ng01-215M15.g
ACCGA032655GA032656
length1,189979
definitionB6Ng01-215M15.b B6Ng01-215M15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaaggcagagaagcacctgaaaaaatgt
tcaacatccttaatcatcagagaaatacaaatcaaaacaaccctgagatt
ccacctcacaccagtgagaatggcaaagataaaacattcaggagacagta
gatgctggcgaggatgtggagaaagaggaacactcctcccatgttggtgt
gattgcaagcttgtacgaccactctggaaatcagtctggtggttcctcag
aaaattggacatagtagtactggaggatcccgcaatacctcttctaggca
tatatccagaagatgttccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagatggaaataactcagatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaattcatgaagttcctaggcaaa
tggatggacctggacagcatcatcctgagtgaggtaacccaatcacaaag
gaactcacacaatatgtactcattgataagtggatattatcacagaaact
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagaccaaagtgttgacactttgccccttcttagaattgggaa
caaaacacccatggaaggagttagagagacaaagtttggagctgtgaaga
aagaatgaaccatctagagactgccatatccagggatccatcccataatc
agcttccaaatgctgacaacattgcataatacactagcaagattttgctg
aaaggacccagatatagctgtctcttttgagactatgccggggcctagca
aacacagaagtggatgctcacagtaagctattgaatgcatcacagggccc
ccaatggaggagctagagaaagtactccagggagctaaagggatctgcaa
ccctataggtagaacaacatttatgaactaactagtaccccgggaggcct
cttgacttctagctgcatattgttatcaaagatgacctagtggccatact
ggtaaggaaggtccaatggacttgcaaactttatattgctcagtacaggg
atcgcaggcaaaagtggattggggtggttagggggaatg

gaattctcaccatcactattaaaaagaattaaaaaaatagaaaaagaaat
ctaacttcttgtgagtgcccaactcgccagcaagaacgatgctgcaacag
gatccttctgcacacgtttattgggagagcttgatttcagaggcgaagag
accccaagcccagaactggtgctgcttatataggcctaggagaggcgtgt
ctcacacccagattggttatacatgggttatgcttaccaccttatttgca
tgtctcacatctgattggttaacttgtctctcatctgattggttaacttg
tctctcatctgattggttaacttgtctctcatctgattggttaacttgtc
tctcatctgattggttaattctcaaaacctcatcttggcaaaaaaacttt
actgcctatgtatgtgtggtggccagcggtagccagcgccaccctgcaac
ggcacatgtttcttcccacactaactgataaaatttaaaatcttaccaaa
ttaaaattgatatttaaataagaggtccctatgttctgtataaacatcag
gaaaagaaaataatcaaatgttaaacctgaaagaaacaaaacctgaaccc
attaggagctacctttctcacttttcccactttctctatattgccacaga
aaatatttcatgagctgagcctgtgactagccttatccaaagctgtttgt
ccatgctttgtttgaaagtttgaaaatgatctgcttggagaatactttct
atcaaagtgaaagtttgggagatgtacttcctagtataataaatgaaaca
taacagagccaaaaaaggcaaatctgatgtcaccagtaatttggtaattt
ggtgttcttaatgcaaagttcccgatatatataatatatatatatatata
tatatatatatatatatatatatatatatatatatatataaaacgcttca
tataataaatagacatggaattcacttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74626433_74627410
seq2: B6Ng01-215M15.g_66_1044

seq1  GAATTCTCACCATCACTATTAAAAAGAATTAAAAAAATAGAAAAAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCATCACTATTAAAAAGAATTAAAAAAATAGAAAAAGAAAT  50

seq1  CTAACTTCTTGTGAGTGCCCAACTCGCCAGCAAGAACGATGCTGCAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTCTTGTGAGTGCCCAACTCGCCAGCAAGAACGATGCTGCAACAG  100

seq1  GATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTTCAGAGGCGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTTCAGAGGCGAAGAG  150

seq1  ACCCCAAGCCCAGAACTGGTGCTGCTTATATAGGCCTAGGAGAGGCGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAGCCCAGAACTGGTGCTGCTTATATAGGCCTAGGAGAGGCGTGT  200

seq1  CTCACACCCAGATTGGTTATACATGGGTTATGCTTACCACCTTATTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACCCAGATTGGTTATACATGGGTTATGCTTACCACCTTATTTGCA  250

seq1  TGTCTCACATCTGATTGGTTAACTTGTCTCTCATCTGATTGGTTAACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACATCTGATTGGTTAACTTGTCTCTCATCTGATTGGTTAACTTG  300

seq1  TCTCTCATCTGATTGGTTAACTTGTCTCTCATCTGATTGGTTAACTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATCTGATTGGTTAACTTGTCTCTCATCTGATTGGTTAACTTGTC  350

seq1  TCTCATCTGATTGGTTAATTCTCAAAACCTCATCTTGGCAAAAAAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTGATTGGTTAATTCTCAAAACCTCATCTTGGCAAAAAAACTTT  400

seq1  ACTGCCTATGTATGTGTGGTGGCCAGCGGTAGCCAGCGCCACCCTGCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTATGTATGTGTGGTGGCCAGCGGTAGCCAGCGCCACCCTGCAAC  450

seq1  GGCACATGTTTCTTCCCACACTAACTGATAAAATTTAAAATCTTACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATGTTTCTTCCCACACTAACTGATAAAATTTAAAATCTTACCAAA  500

seq1  TTAAAATTGATATTTAAATAAGAGGTCCCTATGTTCTGTATAAACATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGATATTTAAATAAGAGGTCCCTATGTTCTGTATAAACATCAG  550

seq1  GAAAAGAAAATAATCAAATGTTAAACCTGAAAGAAACAAAACCTGAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAATAATCAAATGTTAAACCTGAAAGAAACAAAACCTGAACCC  600

seq1  ATTAGGAGCTACCTTTCTCACTTTTCCCACTTTCTCTATATTGCCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAGCTACCTTTCTCACTTTTCCCACTTTCTCTATATTGCCACAGA  650

seq1  AAATATTTCATGAGCTGAGCCTGTGACTAGCCTTATCCAAAGCTGTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTCATGAGCTGAGCCTGTGACTAGCCTTATCCAAAGCTGTTTGT  700

seq1  CCATGCTTTGTTTGAAAGTTTGAAAATGATCTGCTTGGAGAATACTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTTGTTTGAAAGTTTGAAAATGATCTGCTTGGAGAATACTTTCT  750

seq1  ATCAAAGTGAAAGTTTGGGAGATGTACTTCCTAGTATAATAAATGAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGTGAAAGTTTGGGAGATGTACTTCCTAGTATAATAAATGAAACA  800

seq1  TAACAGAGCCAAAAAAGGCAAATCTGATGTCACCAGTAATTTGGTAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAGCCAAAAAAGGCAAATCTGATGTCACCAGTAATTTGGTAATTT  850

seq1  GGTGTTCTTAATGCAAAGTTCCCGATATATATAATATATATATATATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCTTAATGCAAAGTTCCCGATATATATAATATATATATATATATA  900

seq1  TATATATATATATATATATATATATATATATATATATATATAAACGCTCC  950
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  TATATATATATATATATATATATATATATATATATATATA-AAACGCTTC  949

seq1  ATATAATCAAATGTCATG--AATCACTTCA  978
      ||||||| ||  | ||||  | ||||||||
seq2  ATATAATAAATAGACATGGAATTCACTTCA  979


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