BAC Information

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BAC

Clone NameB6Ng01-215P17
Chromosome3 (Build37)
Map Location 117,985,942 - 117,987,035
singlet/doubletsinglet
Overlap genenone
Upstream geneD3Bwg0562e, 4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneDpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215P17.bB6Ng01-215P17.g
ACCGA032795GA032796
length9851,106
definitionB6Ng01-215P17.b B6Ng01-215P17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaacagaggcatttctttttatttttattggatatttctttat
ttacatttcaactgttatccccttgtattggctagttttgtgtcaacttg
acacaggtggagttatcacagagaaaggagcttcagttgaggaaatgcct
ccatgagatacaactgtcaggcattttctcaattagtaatcaagggggaa
aggccccttgtgggtgggactatctctgggctggtagtcttggttctata
agagagcaggctgagcaagccaggggaagcaagccagtaaagaacatccc
tccatggcttctgcatcagctcctgctctctgacctgcttgagttccagt
cctgacttctttcagtgattaacagcaatgtggaaatgtaagctgaataa
accctttcctccccaactttcttcttgcttcatgatgttttgtccaggaa
tagaaaccctgacaaagacatcccctttcccaattttccctctggaaacc
ccctatcccatctcccctctccttgcttctatgaggatgctccctcaccc
acccactcactcctacctcccctacttggcattctcctacaatgggacat
tgaatcttcacaggaccaagagtctctcctcccattgatgcctgacaagg
ctatccaatcaagggatttctaatggccaaaagcactaaagaaatgttca
atgttcttagtcatcagggagatgcaaatcaaaatgactttgggattcca
ctttacacccatcaggaaggctgagatcaaaaactcaagtgacagcatat
gctggtgaggatgtggagcaaggggaacattccctctattgctggtggga
gtgcagactaatttcttagaaaacttgaaacagttctatcccaaggtaca
gttacaccactttctgggtatataaaaaagatatttcatcattaccagaa
ggacacttgttcaacttatttttcatagaaacttt

gaattcattctgcttcttaaacatctttctggtccaaacacatttgatga
ccttcacttgtttatagcctcacccattctgttgttatcttgatctggaa
ttctgtcatagcttcttattgcaactgttacatcttctccccagattcat
ttccatcaagtcttaacagagcaggcaagccttatggtcaaccctcttga
caacatgactaagttgtggtgtattttcaaatggagtagaactaaatact
agatataagtaacataggatatagagataaatgatagcaattaaagcatt
ccaaatttgttctactagatagcaactaattaaatccatgtactgtattt
ggagagttactgagggaggggttttctatgccatgaagcaatgttcagtg
aaactaattccctggtataaattttcaataaagctgatgaaagtgctata
tgctaattagtcttaaaatggaaagaacatttttaaacttaattaacact
atgttgttttctgtgcactgttgacagagaccaagttgtacagggaactt
ccattatgaatgctacacttactatacaagctaagtgtggcctttcacat
tgtgaatccatattttcccctgaaagagtctcatgaagattaaattttat
tcaaagaaagaaatatcattagtgaagaattagaatggttaggctcaaaa
gaaaagcagtaggtattcttttaactccataaatctttctataatgttat
aattgtagggcatcttggtcacaaggtatgtacctgttggtatctttgtt
ctgtatataaagatagaggccttctgtaggattagtactcacattaccac
agaatgtttctgttctgtttgactttgtttactctgggcaactctgtcat
gtgctgacactttccacttttccttccccattcctgatttttaaactaag
gtcatcaaggatttagcaaagattggggtatcaacagttaatgcttgccc
taaaggagaaagacttgggggtatacttctctctgtgtctcttgactacc
tgcatcttccatgaaaacaggttctttgggtttgggataggtaggaactg
caagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117985942_117987035
seq2: B6Ng01-215P17.g_67_1171 (reverse)

seq1  ACTTGCAG-TCCTACCTA--CCCAACCAAAGGAACCTG-TTTCATGGAAG  46
      |||||||| |||||||||  || |||| || ||||||| |||||||||||
seq2  ACTTGCAGTTCCTACCTATCCCAAACCCAAAGAACCTGTTTTCATGGAAG  50

seq1  ATGCAGGTAGGTCAAAGAGACACAGAAGAGAAGTATA-CCCCAAGTCTTT  95
      ||||||||| ||| ||||||||||| ||||||||||| ||||||||||||
seq2  ATGCAGGTA-GTC-AAGAGACACAG-AGAGAAGTATACCCCCAAGTCTTT  97

seq1  CTCC-TTAGG--CAGCATT-ACTGTTTTATACCCCAATC-TTGCTACATC  140
      |||| |||||   |||||| |||| || ||||||||||| |||||| |||
seq2  CTCCTTTAGGGCAAGCATTAACTG-TTGATACCCCAATCTTTGCTAAATC  146

seq1  C-TGATGACC-TAGTTTAAAAATCAGGAATGGGGA--GGAAAGTGG-AAG  185
      | |||||||| ||||||||||||||||||||||||  | ||||||| |||
seq2  CTTGATGACCTTAGTTTAAAAATCAGGAATGGGGAAGGAAAAGTGGAAAG  196

seq1  TGTCAGCACATGACAGAGTTGCCCAGAGTAAACAAAGTCAAACAGAACAG  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCACATGACAGAGTTGCCCAGAGTAAACAAAGTCAAACAGAACAG  246

seq1  AAACATTCTGTGGTAATGTGAGTACTAATCCTACAGAAGGCCTCTATCTT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTGTGGTAATGTGAGTACTAATCCTACAGAAGGCCTCTATCTT  296

seq1  TATATACAGAACAAAGATACCAACAGGTACATACCTTGTGACCAAGATGC  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAGAACAAAGATACCAACAGGTACATACCTTGTGACCAAGATGC  346

seq1  CCTACAATTATAACATTATAGAAAGATTTATGGAGTTAAAAGAATACCTA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATTATAACATTATAGAAAGATTTATGGAGTTAAAAGAATACCTA  396

seq1  CTGCTTTTCTTTTGAGCCTAACCATTCTAATTCTTCACTAATGATATTTC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTCTTTTGAGCCTAACCATTCTAATTCTTCACTAATGATATTTC  446

seq1  TTTCTTTGAATAAAATTTAATCTTCATGAGACTCTTTCAGGGGAAAATAT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGAATAAAATTTAATCTTCATGAGACTCTTTCAGGGGAAAATAT  496

seq1  GGATTCACAATGTGAAAGGCCACACTTAGCTTGTATAGTAAGTGTAGCAT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCACAATGTGAAAGGCCACACTTAGCTTGTATAGTAAGTGTAGCAT  546

seq1  TCATAATGGAAGTTCCCTGTACAACTTGGTCTCTGTCAACAGTGCACAGA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATGGAAGTTCCCTGTACAACTTGGTCTCTGTCAACAGTGCACAGA  596

seq1  AAACAACATAGTGTTAATTAAGTTTAAAAATGTTCTTTCCATTTTAAGAC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACATAGTGTTAATTAAGTTTAAAAATGTTCTTTCCATTTTAAGAC  646

seq1  TAATTAGCATATAGCACTTTCATCAGCTTTATTGAAAATTTATACCAGGG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGCATATAGCACTTTCATCAGCTTTATTGAAAATTTATACCAGGG  696

seq1  AATTAGTTTCACTGAACATTGCTTCATGGCATAGAAAACCCCTCCCTCAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTTTCACTGAACATTGCTTCATGGCATAGAAAACCCCTCCCTCAG  746

seq1  TAACTCTCCAAATACAGTACATGGATTTAATTAGTTGCTATCTAGTAGAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCCAAATACAGTACATGGATTTAATTAGTTGCTATCTAGTAGAA  796

seq1  CAAATTTGGAATGCTTTAATTGCTATCATTTATCTCTATATCCTATGTTA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGGAATGCTTTAATTGCTATCATTTATCTCTATATCCTATGTTA  846

seq1  CTTATATCTAGTATTTAGTTCTACTCCATTTGAAAATACACCACAACTTA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATCTAGTATTTAGTTCTACTCCATTTGAAAATACACCACAACTTA  896

seq1  GTCATGTTGTCAAGAGGGTTGACCATAAGGCTTGCCTGCTCTGTTAAGAC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTGTCAAGAGGGTTGACCATAAGGCTTGCCTGCTCTGTTAAGAC  946

seq1  TTGATGGAAATGAATCTGGGGAGAAGATGTAACAGTTGCAATAAGAAGCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGAAATGAATCTGGGGAGAAGATGTAACAGTTGCAATAAGAAGCT  996

seq1  ATGACAGAATTCCAGATCAAGATAACAACAGAATGGGTGAGGCTATAAAC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGAATTCCAGATCAAGATAACAACAGAATGGGTGAGGCTATAAAC  1046

seq1  AAGTGAAGGTCATCAAATGTGTTTGGACCAGAAAGATGTTTAAGAAGCAG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGGTCATCAAATGTGTTTGGACCAGAAAGATGTTTAAGAAGCAG  1096

seq1  AATGAATTC  1094
      |||||||||
seq2  AATGAATTC  1105


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