BAC Information

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BAC

Clone NameB6Ng01-216A02
Chromosome3 (Build37)
Map Location 118,515,845 - 118,516,912
singlet/doubletsinglet
Overlap geneDpyd
Upstream geneSnx7, LOC100043260
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216A02.bB6Ng01-216A02.g
ACCGA032811GA032812
length1,1441,057
definitionB6Ng01-216A02.b B6Ng01-216A02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcgtattgacagtgtcttttgctttgcagaagctttgcaatttta
tgaggtaccaattatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatgtcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttaaccttagtacaaggagatagaaatggatcaattcca
ttgttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctgttccattgtt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtacagttttaggtccggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatactcggttttttgttattccagatga
atctgccgattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttcttagtttctttcttcagagacttggaagttcttatcaata
cagatcttttgacttccttagttagagtcacgccaaggtattttatatta
tttgtgactattgagaagggtgttgtttccctaatttctttctcagcttg
tttatccttttggtgtacaaaaagggccattgacttggtttgagttaatt
ttaatatcccggcctaccttccactgaaactgattttcagggcattgaga
gctctcctcgtggtggggaattgaatggccacttatagcatact
gaattcttacatggctggttggctctttcttcagcagctcttaagtccca
tccttctcccctgagaccatgtaattctgtcttcccttttctcagttcct
atccagtgcaaatctaaaggttccacccttctctccctgcccagacagtt
ggcctttggctctttattgattgatcaaaacccaactggggacaagggcc
ttcagcgtttggaaatgcacattcccaatgaattcaaagcattacaacca
atccctaacactcatctctttgggcagttctatgaagaatgtctgtacac
aggaaataggaccacacaatattcattgcaagaattccaaattaaaagca
taagaagtccggtactagaatactttgaaataattaaatggataattaca
tctcgtgagttaagcagacagagataccttctatgtgaaagaactgatgg
catttcacgtttttctttgatttctttctcttaagttcctttagaatgtt
agtgtttttgtgaagccgcatgtttaaatcagtgctctgggagaatgcaa
tgcatatgatgtgcagctcattcatgtctatgttgtacattttcatgctg
aaaaccaaatccttcgacgttttgttgtggtggtttgagaaatgtaattt
tatgttcaatttcagtattttatactaaatataaacaaggaagatttatt
tcatcagaataaaggcttctttctctagaagacaagcagtcaaatcccct
agaaaggcttctctgacactccttgtttcttcaggactttatgacctgtc
tgtgacaatataattatctgttacttagaaagacttggatccttactgcc
tttgcttctataacataattagtgttccctcaatttttttatcttgttct
tctcactgagtttggagaagagataggataggcttttgttttatttggga
ttatatgtttggttgctttgcaaacttagtagagactagtccctttggca
agtcaggggtctgatgtgcagtcattaactctcatacttctacttccctg
tggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118515845_118516912
seq2: B6Ng01-216A02.g_66_1122

seq1  GAATTCTTACATGGCTGGTTGGCTCTTTCTTCAGCAGCTCTTAAGTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACATGGCTGGTTGGCTCTTTCTTCAGCAGCTCTTAAGTCCCA  50

seq1  TCCTTCTCCCCTGAGACCATGTAATTCTGTCTTCCCTTTTCTCAGTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCCCCTGAGACCATGTAATTCTGTCTTCCCTTTTCTCAGTTCCT  100

seq1  ATCCAGTGCAAATCTAAAGGTTCCACCCTTCTCTCCCTGCCCAGACAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGCAAATCTAAAGGTTCCACCCTTCTCTCCCTGCCCAGACAGTT  150

seq1  GGCCTTTGGCTCTTTATTGATTGATCAAAACCCAACTGGGGACAAGGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTGGCTCTTTATTGATTGATCAAAACCCAACTGGGGACAAGGGCC  200

seq1  TTCAGCGTTTGGAAATGCACATTCCCAATGAATTCAAAGCATTACAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCGTTTGGAAATGCACATTCCCAATGAATTCAAAGCATTACAACCA  250

seq1  ATCCCTAACACTCATCTCTTTGGGCAGTTCTATGAAGAATGTCTGTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAACACTCATCTCTTTGGGCAGTTCTATGAAGAATGTCTGTACAC  300

seq1  AGGAAATAGGACCACACAATATTCATTGCAAGAATTCCAAATTAAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAGGACCACACAATATTCATTGCAAGAATTCCAAATTAAAAGCA  350

seq1  TAAGAAGTCCGGTACTAGAATACTTTGAAATAATTAAATGGATAATTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTCCGGTACTAGAATACTTTGAAATAATTAAATGGATAATTACA  400

seq1  TCTCGTGAGTTAAGCAGACAGAGATACCTTCTATGTGAAAGAACTGATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTGAGTTAAGCAGACAGAGATACCTTCTATGTGAAAGAACTGATGG  450

seq1  CATTTCACGTTTTTCTTTGATTTCTTTCTCTTAAGTTCCTTTAGAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCACGTTTTTCTTTGATTTCTTTCTCTTAAGTTCCTTTAGAATGTT  500

seq1  AGTGTTTTTGTGAAGCCGCATGTTTAAATCAGTGCTCTGGGAGAATGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTTGTGAAGCCGCATGTTTAAATCAGTGCTCTGGGAGAATGCAA  550

seq1  TGCATATGATGTGCAGCTCATTCATGTCTATGTTGTACATTTTCATGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGATGTGCAGCTCATTCATGTCTATGTTGTACATTTTCATGCTG  600

seq1  AAAACCAAATCCTTCGACGTTTTGTTGTGGTGGTTTGAGAAATGTAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAATCCTTCGACGTTTTGTTGTGGTGGTTTGAGAAATGTAATTT  650

seq1  TATGTTCAATTTCAGTATTTTATACTAAATATAAACAAGGAAGATTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCAATTTCAGTATTTTATACTAAATATAAACAAGGAAGATTTATT  700

seq1  TCATCAGAATAAAGGCTTCTTTCTCTAGAAGACAAGCAGTCAAATCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGAATAAAGGCTTCTTTCTCTAGAAGACAAGCAGTCAAATCCCCT  750

seq1  AGAAAGGCTTCTCTGACACTCCTTGTTTCTTCAGGACTTTATGACCTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCTTCTCTGACACTCCTTGTTTCTTCAGGACTTTATGACCTGTC  800

seq1  TGTGACAATATAATTATCTGTTACTTAGAAAGACTTGGATCCTTACTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAATATAATTATCTGTTACTTAGAAAGACTTGGATCCTTACTGCC  850

seq1  TTTGCTTCTATAACATAATTAGTGTTCCCTCAATTTTTTTATCTTGTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTATAACATAATTAGTGTTCCCTCAATTTTTTTATCTTGTTCT  900

seq1  TCTCACTGAGTTTGGAGAAGAGATAGGATAGGCTTTTGTTTTATTTGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGAGTTTGGAGAAGAGATAGGATAGGCTTTTGTTTTATTTGGGA  950

seq1  -TATATGTTTGGTTGCTTTTGGCAAACTTAGTAGAGACTAGTCCCTTTGG  999
       ||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TTATATGTTTGGTTGCTTT--GCAAACTTAGTAGAGACTAGTCCCTTTGG  998

seq1  CCAAAGTCAAGGGGTCTGATTGTGCAGTCATTAAAACTTCCTCATACCTT  1049
      |  ||||| |||||||||| ||||||||||||  ||||  |||||||  |
seq2  C--AAGTC-AGGGGTCTGA-TGTGCAGTCATT--AACT--CTCATAC--T  1038

seq1  CCTACTTCCCTGTGGATAA  1068
       ||||||||||||||||||
seq2  TCTACTTCCCTGTGGATAA  1057