BAC Information

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BAC

Clone NameB6Ng01-218K13
Chromosome3 (Build37)
Map Location 146,831,674 - 146,950,183
singlet/doubletdoublet
Overlap genePpia-ps3_1528.1
Upstream geneMcoln2, Edg7, Ssx2ip, Ctbs, Spata1, Gng5, Bxdc5, LOC100040473, Dnase2b, Uox, 4930503B20Rik, Gm1652, LOC670100, Prkacb, LOC100040540, Ttll7
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218K13.bB6Ng01-218K13.g
ACCGA034727GA034728
length1,0111,130
definitionB6Ng01-218K13.b B6Ng01-218K13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,949,176 - 146,950,183)(146,831,674 - 146,832,805)
sequence
gaattcctttcctttgtttaggatctccttgaacttgacagctgaatgct
tgcccggtctggacgtgttctgctaagcctgtgggaagtgaacctgttcc
tatctgtccccattgccagctaagctcggcttctagaaacttattctgca
ataggaggccatcgtagggttcttctgccttctggccctccaccaggctg
agcagacaggtcctaataccaacctctgccattttgtaatctcccttgaa
gaactatgtcaagacaagccagactccttctctgaatgccccattgatac
actatactttcttcttctggaaaactcttaagggcaggaactgtccccag
ggcatttggtgctgtatgtggtcagttagcacagaatgtggtgtagtgta
aaccaagcatcaggtttcaaaagacaccataaaaatggaagtttgggtgg
tctaaacaaaatcaatttattttcccttagtcctgaattctcaaagtcta
aaaccaaggtcctacagggttgctttttgatatggcctttctgtatggct
tgttcttgtaatgccctcagctctggctgggcacgggagcagattggggg
aggggcgctcacgcgcatctctttctgttgtgttgctgattcatatcagg
cttgcaatgcatgcttgtatattgagagattaagaataagtgctttcttt
ttcccaggtcctttttgattccttacagaagaatgagacatggatttttt
tttttccccagtatccatcaggaagtctggtaactaatatctgttcaaca
catacttgctgggttgagttcaaccttaaaattgaagatgttctatgaga
atggagtcacatgtaactgtgtacacatgtgggagttttgtctatttatg
tgtgtgggtgagggtgtacgtgagctttttatgttccttatgcaagtgca
tgcatttatgagtgaatgcatcccgttgttcctgtgagtgctctgtgctt
atgtgtgcctg
gaattcatgtgcctgaagaaaactcatcttgacagctgcaggggcagatt
caagagcacacaggtgaaaggtggccacctgggatgttttttaatactag
aagtagaagaaaaaggacatggaggaaaaccccctcagagtgcccgatgg
gggaaacaggtggcgcaaggaagaaacaaataaagatgaaggagagagca
gcaggttaaggccccaggcagagcaaatacaagattcagtggctgcaggt
tcaagcctgaggcaggataatagagctgatggctgcaggaaggaaatcag
atctgtcaagagcacagttcatccatgaatgtatacagccgggtcctgca
gaaagccctgacttgtctgcactcttattcattttcaccagccatgatgg
ccacaccagtcctggaacaagctctgggcccctccattattcatcagatg
atgtgtgtatgcccgtcttaataagcaccatggaatttttctactgttga
aatatttctttcctaactttcactctgaagggatacaggcagccgacccc
ccaaaggaagcaaatataccacaagtggagaaaatatgaagagatataaa
attgttcctaagaatatctccctgtgaggggccctacatataaatgagga
aaaactaataacttcccctttcagcacaaataaatcatcacggggcccaa
cccctctgccttctgaaatgaagcctgacattaagaaaaagtacatgtgc
aaaacccattatagaccacagaggaaggcatgcttttcttcttcttccag
taccaatgtttccatatcctcacatagtcaaaggatggggcacacagagt
gaggaagggaagctagtaaggttggatgctgagctacttgttggcaggtg
gaagtagcttctaagagctgctgctgctgtgactcgctttcctcttagga
aatgaaacagtgttcctcctgacctgacatcaccaaatgtcgcagatagt
tggagaataaaaatatgcatggcatagaagtgagagaattcacatggtct
gaggtaagaaggacagcagtggatttggcactatttgaaatcctcctgga
attagtttatgttccccattgggtgttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_146949176_146950183
seq2: B6Ng01-218K13.b_43_1053 (reverse)

seq1  CAGGCACACATAAGCACATGTACACTCACAGGAAC-ACGGG-TGCATTCA  48
      |||||||||||||||||| |  ||||||||||||| ||||| ||||||||
seq2  CAGGCACACATAAGCACA-GAGCACTCACAGGAACAACGGGATGCATTCA  49

seq1  CTCATAAATGCATGCACTTGCATAAGAAACAT-AAAAGCTCACGTACACC  97
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  CTCATAAATGCATGCACTTGCATAAGGAACATAAAAAGCTCACGTACACC  99

seq1  CTCACCCACACACATAAATAGACAAAACTCCCACATGTGTACACAGTTAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCACACACATAAATAGACAAAACTCCCACATGTGTACACAGTTAC  149

seq1  ATGTGACTCCATTCTCATAGAACATCTTCAATTTTAAGGTTGAACTCAAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTCCATTCTCATAGAACATCTTCAATTTTAAGGTTGAACTCAAC  199

seq1  CCAGCAAGTATGTGTTGAACAGATATTAGTTACCAGACTTCCTGATGGAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGTATGTGTTGAACAGATATTAGTTACCAGACTTCCTGATGGAT  249

seq1  ACTGGGG-AAAAAAAAAATCCATGTCTCATTCTTCTGTAAGGAATCAAAA  296
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGAAAAAAAAAAATCCATGTCTCATTCTTCTGTAAGGAATCAAAA  299

seq1  AGGACCTGGGAAAAAGAAAGCACTTATTCTTAATCTCTCAATATACAAGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTGGGAAAAAGAAAGCACTTATTCTTAATCTCTCAATATACAAGC  349

seq1  ATGCATTGCAAGCCTGATATGAATCAGCAACACAACAGAAAGAGATGCGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTGCAAGCCTGATATGAATCAGCAACACAACAGAAAGAGATGCGC  399

seq1  GTGAGCGCCCCTCCCCCAATCTGCTCCCGTGCCCAGCCAGAGCTGAGGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGCCCCTCCCCCAATCTGCTCCCGTGCCCAGCCAGAGCTGAGGGC  449

seq1  ATTACAAGAACAAGCCATACAGAAAGGCCATATCAAAAAGCAACCCTGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAGAACAAGCCATACAGAAAGGCCATATCAAAAAGCAACCCTGTA  499

seq1  GGACCTTGGTTTTAGACTTTGAGAATTCAGGACTAAGGGAAAATAAATTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTGGTTTTAGACTTTGAGAATTCAGGACTAAGGGAAAATAAATTG  549

seq1  ATTTTGTTTAGACCACCCAAACTTCCATTTTTATGGTGTCTTTTGAAACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTAGACCACCCAAACTTCCATTTTTATGGTGTCTTTTGAAACC  599

seq1  TGATGCTTGGTTTACACTACACCACATTCTGTGCTAACTGACCACATACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTGGTTTACACTACACCACATTCTGTGCTAACTGACCACATACA  649

seq1  GCACCAAATGCCCTGGGGACAGTTCCTGCCCTTAAGAGTTTTCCAGAAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAATGCCCTGGGGACAGTTCCTGCCCTTAAGAGTTTTCCAGAAGA  699

seq1  AGAAAGTATAGTGTATCAATGGGGCATTCAGAGAAGGAGTCTGGCTTGTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTATAGTGTATCAATGGGGCATTCAGAGAAGGAGTCTGGCTTGTC  749

seq1  TTGACATAGTTCTTCAAGGGAGATTACAAAATGGCAGAGGTTGGTATTAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATAGTTCTTCAAGGGAGATTACAAAATGGCAGAGGTTGGTATTAG  799

seq1  GACCTGTCTGCTCAGCCTGGTGGAGGGCCAGAAGGCAGAAGAACCCTACG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTCTGCTCAGCCTGGTGGAGGGCCAGAAGGCAGAAGAACCCTACG  849

seq1  ATGGCCTCCTATTGCAGAATAAGTTTCTAGAAGCCGAGCTTAGCTGGCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTCCTATTGCAGAATAAGTTTCTAGAAGCCGAGCTTAGCTGGCAA  899

seq1  TGGGGACAGATAGGAACAGGTTCACTTCCCACAGGCTTAGCAGAACACGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAGATAGGAACAGGTTCACTTCCCACAGGCTTAGCAGAACACGT  949

seq1  CCAGACCGGGCAAGCATTCAGCTGTCAAGTTCAAGGAGATCCTAAACAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCGGGCAAGCATTCAGCTGTCAAGTTCAAGGAGATCCTAAACAAA  999

seq1  GGAAAGGAATTC  1008
      ||||||||||||
seq2  GGAAAGGAATTC  1011

seq1: chr3_146831674_146832805
seq2: B6Ng01-218K13.g_63_1192

seq1  GAATTCATGTGCCTGAAGAAAACTCATCTTGACAGCTGCAGGGGCAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGCCTGAAGAAAACTCATCTTGACAGCTGCAGGGGCAGATT  50

seq1  CAAGAGCACACAGGTGAAAGGTGGCCACCTGGGATGTTTTTTAATACTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCACACAGGTGAAAGGTGGCCACCTGGGATGTTTTTTAATACTAG  100

seq1  AAGTAGAAGAAAAAGGACATGGAGGAAAACCCCCTCAGAGTGCCCGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAGAAAAAGGACATGGAGGAAAACCCCCTCAGAGTGCCCGATGG  150

seq1  GGGAAACAGGTGGCGCAAGGAAGAAACAAATAAAGATGAAGGAGAGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAGGTGGCGCAAGGAAGAAACAAATAAAGATGAAGGAGAGAGCA  200

seq1  GCAGGTTAAGGCCCCAGGCAGAGCAAATACAAGATTCAGTGGCTGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTAAGGCCCCAGGCAGAGCAAATACAAGATTCAGTGGCTGCAGGT  250

seq1  TCAAGCCTGAGGCAGGATAATAGAGCTGATGGCTGCAGGAAGGAAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTGAGGCAGGATAATAGAGCTGATGGCTGCAGGAAGGAAATCAG  300

seq1  ATCTGTCAAGAGCACAGTTCATCCATGAATGTATACAGCCGGGTCCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCAAGAGCACAGTTCATCCATGAATGTATACAGCCGGGTCCTGCA  350

seq1  GAAAGCCCTGACTTGTCTGCACTCTTATTCATTTTCACCAGCCATGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCCTGACTTGTCTGCACTCTTATTCATTTTCACCAGCCATGATGG  400

seq1  CCACACCAGTCCTGGAACAAGCTCTGGGCCCCTCCATTATTCATCAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCAGTCCTGGAACAAGCTCTGGGCCCCTCCATTATTCATCAGATG  450

seq1  ATGTGTGTATGCCCGTCTTAATAAGCACCATGGAATTTTTCTACTGTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTATGCCCGTCTTAATAAGCACCATGGAATTTTTCTACTGTTGA  500

seq1  AATATTTCTTTCCTAACTTTCACTCTGAAGGGATACAGGCAGCCGACCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTTTCCTAACTTTCACTCTGAAGGGATACAGGCAGCCGACCCC  550

seq1  CCAAAGGAAGCAAATATACCACAAGTGGAGAAAATATGAAGAGATATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGAAGCAAATATACCACAAGTGGAGAAAATATGAAGAGATATAAA  600

seq1  ATTGTTCCTAAGAATATCTCCCTGTGAGGGGCCCTACATATAAATGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCCTAAGAATATCTCCCTGTGAGGGGCCCTACATATAAATGAGGA  650

seq1  AAAACTAATAACTTCCCCTTTCAGCACAAATAAATCATCACGGGGCCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAATAACTTCCCCTTTCAGCACAAATAAATCATCACGGGGCCCAA  700

seq1  CCCCTCTGCCTTCTGAAATGAAGCCTGACATTAAGAAAAAGTACATGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTGCCTTCTGAAATGAAGCCTGACATTAAGAAAAAGTACATGTGC  750

seq1  AAAACCCATTATAGACCACAGAGGAAGGCATGCTTTTCTTCTTCTTCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCATTATAGACCACAGAGGAAGGCATGCTTTTCTTCTTCTTCCAG  800

seq1  TACCAATGTTTCCATATCCTCACATAGTCAAAGGATGGGGCACACAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATGTTTCCATATCCTCACATAGTCAAAGGATGGGGCACACAGAGT  850

seq1  GAGGAAGGGAAGCTAGTAAGGTTGGATGCTGAGCTACTTGTTGGCAGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGGAAGCTAGTAAGGTTGGATGCTGAGCTACTTGTTGGCAGGTG  900

seq1  GAAGTAGCTTCTAAGAGCTGCTGCTGCTGTGACTCGCTTTCCTCTTAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGCTTCTAAGAGCTGCTGCTGCTGTGACTCGCTTTCCTCTTAGGA  950

seq1  AATGAAACAGTGTTCCTCCTGACCTGACATCACCAAATGTCGCAGATAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAACAGTGTTCCTCCTGACCTGACATCACCAAATGTCGCAGATAGT  1000

seq1  TGGAGA--TAAAATATGCATGGCATAGAAGTGAGAGAAATCACATGGTCT  1048
      ||||||   ||||||||||||||||||||||||||||| |||||||||| 
seq2  TGGAGAATAAAAATATGCATGGCATAGAAGTGAGAGAATTCACATGGTC-  1049

seq1  TGAAGTAAAGAAGGGACAGCAGTGAATTTGGGAACTAATTTGAAAATCCT  1098
      ||| || ||||| ||||||||||| |||| || ||| ||||| |||||| 
seq2  TGAGGT-AAGAA-GGACAGCAGTGGATTT-GGCACT-ATTTG-AAATCC-  1093

seq1  TCCTGGAATTAG-TTATG-TCCCCATT-GGTGTTACA  1132
      |||||||||||| ||||| |||||||| |||||||||
seq2  TCCTGGAATTAGTTTATGTTCCCCATTGGGTGTTACA  1130