BAC Information

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BAC

Clone NameB6Ng01-218P24
Chromosome3 (Build37)
Map Location 3,986,428 - 3,987,532
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667655, LOC100039140, Hnf4g, EG383815, LOC100039157, LOC100039167
Downstream geneLOC667709, LOC620283
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218P24.bB6Ng01-218P24.g
ACCGA034969GA034970
length1,1021,097
definitionB6Ng01-218P24.b B6Ng01-218P24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccttgcaccattgccctgataccaatcatgatccatgataat
agtgttaacctgttcattggagcttttaatagtaccaatctcaacagtgt
tacataatagggattaagtttccttcatttgaactttggggaaagtattc
aaatcataacaccaaccagtttggagaaaaggaggatataatacaactaa
aaataccctatcatcaccatcaatattagtgaaattttacattttaacta
atatttccagaaaacagatatcgccactgtgattagtgaggataagttat
gatctagaaagaatataaatgctatgattattaataaattaaagataaat
ttttaaattgaagtataacaaaaaactaatgcaaggaaatgtcatgttaa
tatatatgttaatatatgagcattaatttatagacttcaaatgttttata
gttaagaaattacagaatctattaacattattaatttttcaggtggacat
acaaatattatataaaatattatgctttaatacagtatctgttgtagaat
ttttaatgaatgcaagttttcagaaagagtatccgtacttccattcctga
aatttttcttggttttattttatcagtgaaataatacaatattttctaaa
aggtatattgtcagagggaaagtagcatatattctatcattctataaatg
gagaaaacaagatagttttgacttcttttacaccagataaagtttaacag
aaaccctaagactcctcttcctggaatcgcattttcctttaagttcgtta
ggaatctgaagaaaggctaagagtcatttccattgctgtggttacagttc
cataagaaacaatgaccaaaagtaaaacgggcaacagttctttcatgttt
ccatctccacactggggcaagatctgaaaacttcagtaatcagtgaccat
gaccggcttggaaatgagctgttcaatactacaggttggtattccacatt
gttttgtaatctgtcctcacatatgaaaaggtaagttctgagtattcggg
ggcatatcagtacagcttcagtcagagcactgtatctcaggttatgcctt
tt
gaattcctgatctttccaggacttttgtcatgaagggttgttggatcttc
ttagattctttctcagcatctaatgagatgatcatatgttttttttctat
gagtttctttatatagttgattatattgatgatttccatatgttgaacag
tccttgcatccctgggatgaagcctaattgatcatgattcaattttgcta
gaattttattgagtattttacatcgatattcctaagtgaaattgatctga
agtactctaactttgttggatctttttgtgttttaggtatcatagtaatt
gtggcttcataaaatgaaatgggtaagaatactttctgtttctatctgat
agatggccaatattcattatatacaaataactcaagaagttagactccaa
agaaccaaatagcccaataacccaataataataacccaataacccaataa
ccaataaccaataataataacccaaataacccaatatcccaataatagta
aaaggattcccaactgagtaataccatatagctgagaagcacctaaagtc
atgttcaacacccttaatcatcagggaaatgcaaatcaaaacaaatctgt
gattccacctgttgggagccgcgcccacattcgccgttacaagatggcgc
tgacagctgtgttctaagtggtaaacaaataatctgcgcatgtgccgagg
gtggttcttcactccatgtgctctaccttttcccgtgaacgtcagctcgg
ccatgggctgcagccaatcagggagtgatgcgtcctaggcgaaatttaac
gctcctaaaaaaggggacgggtttccgccattctctctcgctggcatctc
tctggctctgcgcgccctgcgctcgctcgctgcctaagatgtaaacaata
gagcacgctctgcgcttttggcgcgccggagctctggctcctaaaaatat
tagaatggggctttcgtttttggggctgggcgactgggacgcttgtccat
cctggcttccctaagaatgttagcaataaagttttgccgcagagattctg
tcctgctgggtcttttcctgaccgtcgtgagaacgcctccttatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3986428_3987532
seq2: B6Ng01-218P24.b_45_1146 (reverse)

seq1  AAAAGGCATAAACTGAGATTACA-TGCTCTGACTTGAGCTGTACTTGATA  49
      ||||||||||| |||||| |||| ||||||||||  |||||||| |||||
seq2  AAAAGGCATAACCTGAGA-TACAGTGCTCTGACTGAAGCTGTAC-TGATA  48

seq1  TGCCCCCG-ATACTTCAGAACTTACCTTTTCATATGTGGAAGACAGATTA  98
      |||||||| |||| ||||||||||||||||||||||| || |||||||||
seq2  TGCCCCCGAATAC-TCAGAACTTACCTTTTCATATGT-GAGGACAGATTA  96

seq1  CAAAACAATGTGGAAATACCAACCTGTAGTATTGAACAGCTCATTTCCAA  148
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATGTGG-AATACCAACCTGTAGTATTGAACAGCTCATTTCCAA  145

seq1  GCCGGTCATGGTCACTGATTACTGAAGTTTTCAGATCTTGCCCCAGTGTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGTCATGGTCACTGATTACTGAAGTTTTCAGATCTTGCCCCAGTGTG  195

seq1  GAGATGGAAACATGAAAGAACTGTTGCCCGTTTTACTTTTGGTCATTGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAAACATGAAAGAACTGTTGCCCGTTTTACTTTTGGTCATTGTT  245

seq1  TCTTATGGAACTGTAACCACAGCAATGGAAATGACTCTTAGCCTTTCTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGGAACTGTAACCACAGCAATGGAAATGACTCTTAGCCTTTCTTC  295

seq1  AGATTCCTAACGAACTTAAAGGAAAATGCGATTCCAGGAAGAGGAGTCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTAACGAACTTAAAGGAAAATGCGATTCCAGGAAGAGGAGTCTT  345

seq1  AGGGTTTCTGTTAAACTTTATCTGGTGTAAAAGAAGTCAAAACTATCTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTGTTAAACTTTATCTGGTGTAAAAGAAGTCAAAACTATCTTG  395

seq1  TTTTCTCCATTTATAGAATGATAGAATATATGCTACTTTCCCTCTGACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCATTTATAGAATGATAGAATATATGCTACTTTCCCTCTGACAA  445

seq1  TATACCTTTTAGAAAATATTGTATTATTTCACTGATAAAATAAAACCAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTTTAGAAAATATTGTATTATTTCACTGATAAAATAAAACCAAG  495

seq1  AAAAATTTCAGGAATGGAAGTACGGATACTCTTTCTGAAAACTTGCATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTCAGGAATGGAAGTACGGATACTCTTTCTGAAAACTTGCATTC  545

seq1  ATTAAAAATTCTACAACAGATACTGTATTAAAGCATAATATTTTATATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATTCTACAACAGATACTGTATTAAAGCATAATATTTTATATAA  595

seq1  TATTTGTATGTCCACCTGAAAAATTAATAATGTTAATAGATTCTGTAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTATGTCCACCTGAAAAATTAATAATGTTAATAGATTCTGTAATT  645

seq1  TCTTAACTATAAAACATTTGAAGTCTATAAATTAATGCTCATATATTAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTATAAAACATTTGAAGTCTATAAATTAATGCTCATATATTAAC  695

seq1  ATATATATTAACATGACATTTCCTTGCATTAGTTTTTTGTTATACTTCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTAACATGACATTTCCTTGCATTAGTTTTTTGTTATACTTCAA  745

seq1  TTTAAAAATTTATCTTTAATTTATTAATAATCATAGCATTTATATTCTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTTATCTTTAATTTATTAATAATCATAGCATTTATATTCTTT  795

seq1  CTAGATCATAACTTATCCTCACTAATCACAGTGGCGATATCTGTTTTCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCATAACTTATCCTCACTAATCACAGTGGCGATATCTGTTTTCTG  845

seq1  GAAATATTAGTTAAAATGTAAAATTTCACTAATATTGATGGTGATGATAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTAGTTAAAATGTAAAATTTCACTAATATTGATGGTGATGATAG  895

seq1  GGTATTTTTAGTTGTATTATATCCTCCTTTTCTCCAAACTGGTTGGTGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTTAGTTGTATTATATCCTCCTTTTCTCCAAACTGGTTGGTGTT  945

seq1  ATGATTTGAATACTTTCCCCAAAGTTCAAATGAAGGAAACTTAATCCCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTGAATACTTTCCCCAAAGTTCAAATGAAGGAAACTTAATCCCTA  995

seq1  TTATGTAACACTGTTGAGATTGGTACTATTAAAAGCTCCAATGAACAGGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAACACTGTTGAGATTGGTACTATTAAAAGCTCCAATGAACAGGT  1045

seq1  TAACACTATTATCATGGATCATGATTGGTATCAGGGCAATGGTGCAAGGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTATTATCATGGATCATGATTGGTATCAGGGCAATGGTGCAAGGA  1095

seq1  TGAATTC  1105
      |||||||
seq2  TGAATTC  1102