MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-219O04
Chromosome	3 (Build37)
Map Location	99,259,894 - 99,260,944
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5, LOC668543, Hsd3b2, Hsd3b3, Hsd3b6, LOC545556, Hsd3b1, Hao3, LOC668557, Wars2, Tbx15
Downstream gene	M6pr-ps, Spag17, LOC623045, Wdr3, Gdap2, LOC195514
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043461 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 63 ESTs, 20 Proteins

name	Hsd3b4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15495 MGI:96236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043456 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 21 Proteins

name	EG545555 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545555 MGI:3648707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 436 ESTs, 6 Proteins pseudo : _no_value

name	LOC676433 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Hsd3b5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15496 MGI:104645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668543 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668543
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Hsd3b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15493 MGI:96234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd3b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15494 MGI:96235
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd3b6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15497 MGI:109598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545556 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545556
definition	note : 14-3-3 protein eta pseudogene pseudo : _no_value

name	Hsd3b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15492 MGI:96233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hao3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56185 MGI:1860477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668557 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Wars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70560 MGI:1917810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbx15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21384 MGI:1277234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	M6pr-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17114 MGI:96905
definition	note : mannose-6-phosphate receptor, pseudogene pseudo : _no_value

name	Spag17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74362 MGI:1921612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623045 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Wdr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269470 MGI:2443143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14547 MGI:1338001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC195514 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:195514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	LOC100043461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251414 GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 60 ESTs, 19 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 2 transcript_id : XM_001480502.1

name	LOC100043461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251412 GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 19 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 1 transcript_id : XM_001480498.1

name	LOC100043461 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251416 GeneID:100043461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 2 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 3 transcript_id : XM_001480506.1

name	Hsd3b4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680290 GeneID:15495 MGI:96236
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4 transcript_id : NM_008294.1

name	LOC100043456 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251408 GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 62 ESTs, 20 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 2 transcript_id : XM_001480492.1

name	LOC100043456 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251406 GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 53 ESTs, 20 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 1 transcript_id : XM_001480488.1

name	LOC100043456 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251410 GeneID:100043456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 45 ESTs, 2 Proteins product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase, transcript variant 3 transcript_id : XM_001480494.1

name	Hsd3b5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680666 GeneID:15496 MGI:104645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 transcript_id : NM_008295.2

name	Hsd3b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542968 GeneID:15493 MGI:96234
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 transcript_id : NM_153193.2

name	Hsd3b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59858544 GeneID:15494 MGI:96235
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 transcript_id : NM_001012306.1

name	Hsd3b6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980731 GeneID:15497 MGI:109598
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6 transcript_id : NM_013821.2

name	Hsd3b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387492 GeneID:15492 MGI:96233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 transcript_id : NM_008293.3

name	Hao3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364954 GeneID:56185 MGI:1860477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxyacid oxidase (glycolate oxidase) 3 transcript_id : NM_019545.3

name	Wars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347914 GeneID:70560 MGI:1917810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tryptophanyl tRNA synthetase 2 (mitochondrial) transcript_id : NM_027462.3

name	Tbx15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286801 GeneID:21384 MGI:1277234
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 15 transcript_id : NM_009323.2

name	Spag17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384574 GeneID:74362 MGI:1921612
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 17 transcript_id : NM_028892.3

name	LOC623045 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:82890747 GeneID:623045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to rat ribosomal protein L36 transcript_id : XM_889919.1

name	Wdr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254308 GeneID:269470 MGI:2443143
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 3 transcript_id : NM_175552.3

name	Gdap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367633 GeneID:14547 MGI:1338001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ganglioside-induced differentiation-associated-protein 2 transcript_id : NM_010269.2

name	LOC100043461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251417 GeneID:100043461
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 3 protein_id : XP_001480556.1

name	LOC100043461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251413 GeneID:100043461
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 1 protein_id : XP_001480548.1

name	LOC100043461 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251415 GeneID:100043461
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 2 protein_id : XP_001480552.1

name	Hsd3b4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680291 CCDS:CCDS17665.1 GeneID:15495 MGI:96236
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 function : NADPH dependent 3-ketosteroid reductase note : 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4 isomerase product : hydroxysteroid dehydrogenase-4, delta<5>-3-beta protein_id : NP_032320.1

name	LOC100043456 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251411 GeneID:100043456
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 3 protein_id : XP_001480544.1

name	LOC100043456 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251407 GeneID:100043456
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 1 protein_id : XP_001480538.1

name	LOC100043456 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251409 GeneID:100043456
definition	codon_start : 1 product : similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase isoform 2 protein_id : XP_001480542.1

name	Hsd3b5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680667 CCDS:CCDS17666.1 GeneID:15496 MGI:104645
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 note : 3(beta)HSDV product : hydroxysteroid dehydrogenase-5, delta<5>-3-beta protein_id : NP_032321.2

name	Hsd3b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23397415 CCDS:CCDS17667.1 GeneID:15493 MGI:96234
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hydroxysteroid dehydrogenase-2, delta<5>-3-beta protein_id : NP_694873.1

name	Hsd3b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59858545 CCDS:CCDS17668.1 GeneID:15494 MGI:96235
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 protein_id : NP_001012306.1

name	Hsd3b6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305167 CCDS:CCDS17669.1 GeneID:15497 MGI:109598
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 3beta-HSD VI product : hydroxysteroid dehydrogenase-6, delta<5>-3-beta protein_id : NP_038849.1

name	Hsd3b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680289 CCDS:CCDS17670.1 GeneID:15492 MGI:96233
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 product : hydroxysteroid dehydrogenase-1, delta<5>-3-beta protein_id : NP_032319.1

name	Hao3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980953 CCDS:CCDS17671.1 GeneID:56185 MGI:1860477
definition	GO_component : GO:0005777 - peroxisome [Evidence TAS] [Evidence IEA] GO_function : GO:0003973 - (S)-2-hydroxy-acid oxidase activity [Evidence TAS] [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006631 - fatty acid metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation note : medium-chain 2-hydroxy acid oxidase HAOX3 product : hydroxyacid oxidase (glycolate oxidase) 3 protein_id : NP_062418.2

name	Wars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543952 CCDS:CCDS17672.1 GeneID:70560 MGI:1917810
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IDA] codon_start : 1 product : mitochondrial tryptophanyl tRNA synthetase 2 protein_id : NP_081738.2

name	Tbx15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286802 CCDS:CCDS17673.1 GeneID:21384 MGI:1277234
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : droopy ear; T-box 14 product : T-box 15 protein_id : NP_033349.2

name	Spag17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606047 GeneID:74362 MGI:1921612
definition	codon_start : 1 exception : mismatches in translation product : sperm associated antigen 17 protein_id : NP_083168.2

name	LOC623045 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82890748 GeneID:623045
definition	codon_start : 1 product : similar to rat ribosomal protein L36 protein_id : XP_895012.1

name	Wdr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425338 CCDS:CCDS17674.1 GeneID:269470 MGI:2443143
definition	codon_start : 1 product : WD repeat domain 3 protein_id : NP_780761.1

name	Gdap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22094097 CCDS:CCDS17675.1 GeneID:14547 MGI:1338001
definition	codon_start : 1 product : ganglioside-induced differentiation-associated-protein 2 protein_id : NP_034399.1

name	LOC676433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676433
definition	number : 3 pseudo : _no_value

name	LOC676433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676433
definition	number : 2 pseudo : _no_value

name	LOC676433 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676433
definition	number : 1 pseudo : _no_value

name	LOC668543 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668543
definition	number : 3 pseudo : _no_value

name	LOC668543 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668543
definition	number : 2 pseudo : _no_value

name	LOC668543 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668543
definition	number : 1 pseudo : _no_value

name	LOC668557 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668557
definition	number : 1 pseudo : _no_value

name	LOC195514 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:195514
definition	number : 1 pseudo : _no_value

name	LOC195514 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:195514
definition	number : 2 pseudo : _no_value

name	LOC195514 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:195514
definition	number : 3 pseudo : _no_value

name	EG545555 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251418 GeneID:545555 MGI:3648707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 436 ESTs, 6 Proteins product : predicted gene, EG545555 pseudo : _no_value transcript_id : XR_034745.1

clone name	MSMg01-048K11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-048J11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-264N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-428C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372P09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-295A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500B14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-360I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111J07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-219O04.b	B6Ng01-219O04.g
ACC	GA035590	GA035591
length	1,185	1,046
definition	B6Ng01-219O04.b	B6Ng01-219O04.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaccagtatcctggtacacctgcgcacctctcaagatgtttgtgg cttatatgaggaagtcaggtgcaagtcatacgacttagctgtagtccctg gcgcctttgggactgccgccacacctgctcctcacaaatattaaagacaa acccttgccaagaagtcactatgactagagttggcaatcaggaaatttta gaatacttttatttatgtttctgcgaagatagttgtgggtattttgatta ggattacattgaacctgtaaatagcttttggtaggatggtcattttcaca tattcattctactgatccttgaatattagcagtctttttatttactagtg gcttccccaattagttttcagagatcagacgttttcatcataaaggtctt tcccctccttgtttacatttattccaagatagtttattgtgccaatgact tctttgtcagtgttggtgatatgcagaaaggcttgggggagttggttgga tgtgacactttggtgaacttgtttgtttctagaaattttcaggtggaatt ttagggatgtcttatatgtagtatcatatcgtctgcaattaaggataatt tggcttaatttcctattatattcatttaattttctttttgtgccacatta ctcttcaagtatcttctgtgagactgtctctcctagacatgacagggaag ccacccccacaatatctcaacaaggtatggctacataaacaagacctcaa caataacaatatcaatagacatgctaacagaaaaggaagaaaactttcag gctcctagacaaagaaataaaggcagctagtaactacagagagagagaga gagagagagagagagagagagagttaatatatatgccaagggatgagcct gaaggttggttatccaatatgaagttactgtccctgaaatcctatacacc caaaaccctataaatagactcatcagttttacttatatatgcctatcaat atctacctgtaagtagatagatagatgatatatgattatattcaaaacag aagaaagttgaaaaggcacgttagaggataaacggaggaacattgggaat ggtgggagaggagctagagaaagaaatggggaagagcagcatttgatatt atattgaacctaaaaaacgtgcgattaacatgtta	gaattcactgggaaccaaacctacttaaaagtgaaacctcatatccctgg ggctttcaatttagagaggggagaaactttccttagcttgctgttcctcc tgccagatttcagctataacagagaatcttttcacaaaatgtagtcaatt tatatttcaggcatttaaaacagttcattggctcatctggacactgaaaa gtctcctagtctgtcccagtgatctggcacgctacatttggctcacactg agaactcatacacctggcaatgctatctctactttcctgattctcagaag gaggtcttcaaacacagaagtgttttggatggtgtgttgtgttcaatgtg cccaatgccaatgcatgtaaaataattcatacctgggtatgggaagatga ggctgaggaccaggtaatggagaagaaagcagctcacatgataggaactg taaagacatggatatattattctgaaaaaggtttaattgacccaaagcct ttcccagtgggctcattcttggtttcattaatgtttattctcagagactt cgtcacctcctttgtgactaacttgacgttaagctttttgagaaggttag gagcaatgcaagtttaacccaacacttaataatatccaaagtccaagtta cctctggtgggattacagctccataaacacaggcaagatctgagacttga tagttacagttgcttgtgttacctgggactcagttgttggcctcacaaca gccagggctttctggaagagtgggggaagctgtcctgctccaatgtaata aaaacagaatctgaggacattactcaggctctatagtgataattttttgt gacacatggaaagtgtccagtatagtgcctggcacacagtacaaacttct aatgttagtttgcctataatcatcatcactgaaacaggattcagccctag caagaaacttggcagttcagcatcagaatttctctttttctttctccctt ctttccctttccttccctttcttcccttcccttaccttaccttacc
quality values	Open. Hide. 58 31 34 38 62 34 26 62 38 37 62 54 62 47 62 62 62 62 62 54 62 56 32 62 62 62 62 59 62 59 30 39 36 28 38 39 35 28 28 32 54 35 62 59 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 56 54 56 54 45 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 54 54 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 42 62 62 62 62 62 62 58 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 52 52 58 54 58 54 58 42 49 36 42 50 54 54 58 58 58 58 53 58 54 58 52 54 58 54 54 58 54 54 58 54 58 54 58 58 58 58 41 58 58 42 54 58 52 58 58 58 58 58 58 58 58 58 58 49 58 52 58 47 58 49 58 58 49 58 58 58 58 58 49 41 58 58 54 50 47 52 51 49 52 58 58 50 51 51 50 58 27 51 54 49 58 58 58 51 41 58 50 53 31 51 37 34 53 58 46 40 32 33 58 35 49 49 37 49 58 42 58 58 58 58 44 50 52 37 58 51 53 51 51 53 41 38 50 51 23 50 32 58 32 53 52 58 58 27 39 31 53 35 58 27 58 49 39 17 54 50 39 23 44 52 52 33 32 50 32 49 50 52 52 52 27 47 53 52 49 42 41 39 53 33 42 50 52 32 45 53 42 33 39 33 40 37 29 54 54 54 41 14 39 26 51 32 53 54 54 35 31 51 49 46 37 31 31 51 25 47 33 41 39 32 23 37 31 23 54 54 30 53 54 26 37 32 54 46 39 51 29 31 31 38 45 31 38 39 32 31 32 53 22 46 9 36 53 24 30 31 34 41 32 34 52 31 34 34 37 31 45 31 34 33 41 31 34 25 30 40 42 33 33 26 39 30 31 27 22 29 31 11 9 11 28 31 51 27 42 20 30 29 13 32 7 33 18 47 13 26 23 31 45 24 36 33 31 31 30 33 21 32 16 32 31 36 16 30 33 34 28 33 29 42 24 31 29 31 33 25 30 32 24 18 23 18 41 19 29 46 33 31 38 44 46 33 17 27 36 26 28 25 23 26 24 32 41 44 16 32 41 29 29 46 30 31 26 28 30 46 25 18 18 9 21 20 30 24 13 22 35 26 13 31 46 48 19 21 34 25 27 34 26 17 18 21 32 37 26 25 35 28 38 31 24 21 25 18 25 32 27 33 29 33 27 35 13 26 25 29 10 8 6 29 17 29 33 34 21 21 24 31 23 27 42 10 13 7 8 12 15 8 5 8 19 31 22 14 28 27 23 30 40 31 7 13 4 6 19 8 31 39 32 31 22 26 7 19 31 39 22 14 28 6 5 6 5 19 20 10 16 20 8 23 25 9 9 29 20 3 4 5 6 9 18 18 7 8 10 24 6 11 16 17 13 12 4 10 9 13 16 28 16 8 8 11 8 8 6 5 9 13 6 5 5 4 9 34 24 5 25 32 11 7 14 28 25 12 14 11 6 27 7 3 3 5 5 6 17 26 7 9 8 6 12 8 14 4 11 5 20 16 10 4 4 6 9 23 6 11 10 18 17 4 4 5 6 6 12 6 4 15 14 10 4 6 4 11 5 5 8 13	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr3_99259894_99260944
seq2: B6Ng01-219O04.g_67_1112

seq1  GAATTCACTGGGAACCAAACCTACTTAAAAGTGAAACCTCATATCCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGGAACCAAACCTACTTAAAAGTGAAACCTCATATCCCTGG  50

seq1  GGCTTTCAATTTAGAGAGGGGAGAAACTTTCCTTAGCTTGCTGTTCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCAATTTAGAGAGGGGAGAAACTTTCCTTAGCTTGCTGTTCCTCC  100

seq1  TGCCAGATTTCAGCTATAACAGAGAATCTTTTCACAAAATGTAGTCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGATTTCAGCTATAACAGAGAATCTTTTCACAAAATGTAGTCAATT  150

seq1  TATATTTCAGGCATTTAAAACAGTTCATTGGCTCATCTGGACACTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCAGGCATTTAAAACAGTTCATTGGCTCATCTGGACACTGAAAA  200

seq1  GTCTCCTAGTCTGTCCCAGTGATCTGGCACGCTACATTTGGCTCACACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTAGTCTGTCCCAGTGATCTGGCACGCTACATTTGGCTCACACTG  250

seq1  AGAACTCATACACCTGGCAATGCTATCTCTACTTTCCTGATTCTCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCATACACCTGGCAATGCTATCTCTACTTTCCTGATTCTCAGAAG  300

seq1  GAGGTCTTCAAACACAGAAGTGTTTTGGATGGTGTGTTGTGTTCAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTCAAACACAGAAGTGTTTTGGATGGTGTGTTGTGTTCAATGTG  350

seq1  CCCAATGCCAATGCATGTAAAATAATTCATACCTGGGTATGGGAAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGCCAATGCATGTAAAATAATTCATACCTGGGTATGGGAAGATGA  400

seq1  GGCTGAGGACCAGGTAATGGAGAAGAAAGCAGCTCACATGATAGGAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGACCAGGTAATGGAGAAGAAAGCAGCTCACATGATAGGAACTG  450

seq1  TAAAGACATGGATATATTATTCTGAAAAAGGTTTAATTGACCCAAAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACATGGATATATTATTCTGAAAAAGGTTTAATTGACCCAAAGCCT  500

seq1  TTCCCAGTGGGCTCATTCTTGGTTTCATTAATGTTTATTCTCAGAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTGGGCTCATTCTTGGTTTCATTAATGTTTATTCTCAGAGACTT  550

seq1  CGTCACCTCCTTTGTGACTAACTTGACGTTAAGCTTTTTGAGAAGGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACCTCCTTTGTGACTAACTTGACGTTAAGCTTTTTGAGAAGGTTAG  600

seq1  GAGCAATGCAAGTTTAACCCAACACTTAATAATATCCAAAGTCCAAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGCAAGTTTAACCCAACACTTAATAATATCCAAAGTCCAAGTTA  650

seq1  CCTCTGGTGGGATTACAGCTCCATAAACACAGGCAAGATCTGAGACTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTGGGATTACAGCTCCATAAACACAGGCAAGATCTGAGACTTGA  700

seq1  TAGTTACAGTTGCTTGTGTTACCTGGGACTCAGTTGTTGGCCTCACAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACAGTTGCTTGTGTTACCTGGGACTCAGTTGTTGGCCTCACAACA  750

seq1  GCCAGGGCTTTCTGGAAGAGTGGGGGAAGCTGTCCTGCTCCAATGTAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTTTCTGGAAGAGTGGGGGAAGCTGTCCTGCTCCAATGTAATA  800

seq1  AAAACAGAATCTGAGGACATTACTCAGGCTCTATAGTGATAATTTTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAATCTGAGGACATTACTCAGGCTCTATAGTGATAATTTTTTGT  850

seq1  GACACATGGAAAGTGTCCAGTATAGTGCCTGGCACACAGTACAAACTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGAAAGTGTCCAGTATAGTGCCTGGCACACAGTACAAACTTCT  900

seq1  AATGTTAGTTTGCCTATAATCATCATCACTGAAACAGGATTCAGCCCTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAGTTTGCCTATAATCATCATCACTGAAACAGGATTCAGCCCTAG  950

seq1  C-AGAAACTTGGCAGTTCAGCATCAGGAATTTCTCTTTTTTCTTTCCTTC  999
      | ||||||||||||||||||||||| ||||||||| ||||||||||  ||
seq2  CAAGAAACTTGGCAGTTCAGCATCA-GAATTTCTC-TTTTTCTTTC--TC  996

seq1  CCTTTCCTTCCCTTTCCTTCCCTTTCCTTCCCTTCCCTTCCCTTCCCTTC  1049
      || ||| |||||||||||||||||| ||||||||||||| |||| |||| 
seq2  CC-TTCTTTCCCTTTCCTTCCCTTT-CTTCCCTTCCCTTACCTTACCTTA  1044

seq1  CC  1051
      ||
seq2  CC  1046

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information