BAC Information

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BAC

Clone NameB6Ng01-220A07
Chromosome3 (Build37)
Map Location 91,949,818 - 91,950,068
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik
Downstream geneSprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h, Lce1i, LOC545547, LOC631101, Kprp, Lce1l, 2310050C09Rik, Lce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m, EG229571, Crnn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220A07.bB6Ng01-220A07.g
ACCGA035685GA035686
length1,015251
definitionB6Ng01-220A07.b B6Ng01-220A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaataccgaatggctgagaagtacctgataaaatg
ttcaaaatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tacacctcacacctgtcagaatggctaagatcaaaaatgcagatggcagc
agatgctggcgaggatatggagaaagaggaacactcttccaatgttgttg
ggattgcaagcttgtacaaccactctgaaaatcagtctggtggttcctca
gaaaattggacatagtattaccagaagaaccagcaatacctctcttgggc
atatacccagaagatgttccaacttgtaataagaacacatgctccactat
gttcatagcagctttatttataataggcagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaattgtggtacatttacacaatg
gagtactactcggcaattaaaaacaatgaatttatgaaattcttatgcaa
atggatggatttgggagttatcatcctgagtgaggtaaccgaatcacaat
agaatacacatgatatgtactcactgataattgaatattaacctagaaac
ttagactacccaagatacaatttgcaaaacacatgaaactcaagaaggaa
gaccacagtgtggatacttcattccttcttagattgaggaacaaaatacc
catggagggagttacagagataaacttcggacctgagatgaaaggaaaga
ccatccagagattgccccacctggggatccatcctatatataaccaccaa
agctagaatatgcctttgaatatgccagaaagattttgctgacagaatca
tgatatagctatcacttgagaggctatgtcagtgtctggcaaatacagaa
gtgaatgcttacagtcatctattggatggaacacagggcccctaatgaag
gagctagagaaagtaaccaagagataaaggggtctgcaaccctataggag
gatcacaatatgagc
agtactccgaatcaatgttttataaaaaaaaaaaaaaaaaaaaaaaaaaa
gaaagaaagaaaaatggcctaggtggcacagtggcacaatggcacaatgg
gaatggtaatcccattgctaggaaaagtgatactgatagatccgtggggt
ttgtttgctgctagaatgccatgtctaaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaaggagggagggagggaggg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91949818_91950068
seq2: B6Ng01-220A07.g_72_322 (reverse)

seq1  TCCCTCCCTCCCTCCCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTCCCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  50

seq1  CTTTCTTTCTTTCTTTCTTTCTTTTAGACATGGCATTCTAGCAGCAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTTAGACATGGCATTCTAGCAGCAAACA  100

seq1  AACCCCACGGATCTATCAGTATCACTTTTCCTAGCAATGGGATTACCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACGGATCTATCAGTATCACTTTTCCTAGCAATGGGATTACCATT  150

seq1  CCCATTGTGCCATTGTGCCACTGTGCCACCTAGGCCATTTTTCTTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTGCCATTGTGCCACTGTGCCACCTAGGCCATTTTTCTTTCTTT  200

seq1  CTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAACATTGATTCTGAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAACATTGATTCGGAGTAC  250

seq1  T  251
      |
seq2  T  251