BAC Information

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BAC

Clone NameB6Ng01-230K15
Chromosome3 (Build37)
Map Location 3,768,151 - 3,768,901
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667655, LOC100039140, Hnf4g
Downstream geneEG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230K15.bB6Ng01-230K15.g
ACCGA043469GA043470
length1,016989
definitionB6Ng01-230K15.b B6Ng01-230K15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgcagatgaaacaactttctcaagagaacattgcttgtgcag
acaataaaaccaactatcaataaacaagacctcatgaaactaagaagctt
cactattgcaaaggatagcattattcagcaaaaaaagacacactataaat
ggaaaatatttttactaattacacatcttagagagagagagctaatataa
aaatatatataaagatctcaaaactacatataaaggaaatataatccaat
tgagttgtaaggtaaatatctaaacagagaattattaatagaggaagctc
aaacatagaaatgctcaaaatccttagtcatgaaagaatacaaatcaaag
tgctttgtaatttcaccttacgtgccaaaatggctaagatcaacaaaaca
agtgatatcaaatgttgttaaggttttagagtaagaagaaaacacataaa
ctactgaatggaatgcaaactcataaaaccagtatgaaagtcagtttggt
gattcctcaagaggataggaattgatgcacttcaagatgtagctatatca
ctcttgggtgcatatacaaaaattgtacatcataccacaagaggtacttg
atctaacatgttcactgctattctatccataaaagccagaaactgtaaac
aacttagatgtcccttaacagaagaatggataaagaaaatgcgatatatt
tatacaaagggatactattcataaaaagcaacatcatcatctacaacaat
aataaataacatcactaaatttaaatttttaggtaaatggataaaagtag
aaaaaatcatcctgagatacttatctcagaccccaaaaagaaaaatatag
tatgtgtttgcatatgtttggatattagctgttaagtcagtgataaaaag
ctacaattattgacccattgagaataagtatatagtaaggatctagagga
aacagatatcatttgaaaagggatatcaatatatattatttggatgaatg
ggggaaacgcaagtgc

gaattcttttttgaatcttggtttccaaaataatgcagaccatcaaacaa
cccctttccttcccataaagcagcatagactttgctgaagagccatcaaa
tgcagcttccttttccagagtctgccatgcccagccttgtgttttgtgta
gggatgagtttctagactcatgagacagttttattatttctacaatgaat
attaaaatttcgcactattaacataaattagataatgcatgtggaacact
taaccaaaatacaaaataccaggcatatactaaattcaggttagggtaaa
agagtcccgtagaattcacaagaatcagaaatctactcatttgcacactc
agaaatgccataaaatgctaaacttgaagctataatgtatacacaaagga
tatatacatatataatatatatgctaataaatatattaaagaagaccatt
catattacattatgagacaaggaacctccaaagatgctgttgactttact
ccctttgaccagctactgctgggaatgcagcttctctttagagtagtttg
agtcagacagtcatgacacatgactgtattaacagcacttcgaaggcaga
gacaggcagatttctgaatttgaggccagcctggtctacagagtgagttc
catgaaagccagggctacacagagaaaccctatcttgaaaaggcaaataa
ataaataaataaataaataaataaataaataaataaatagatagataaag
ataaagataaaaataaaaataaaaataaaaataaaaataaaaataaaaat
aaaaataaggtttgtataccagtaaggctcccttggaagaaactaaattt
tttttaaatatttttttattacgtatttttctcaattacatttccaatgc
tatcccaaaagtccgccataccctccctcccactcccctacccacccatt
cccactttttggccctggcgttcccctgtactggggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3768151_3768901
seq2: B6Ng01-230K15.g_69_819

seq1  GAATTCTTTTTTGAATCTTGGTTTCCAAAATAATGCAGACCATCAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTGAATCTTGGTTTCCAAAATAATGCAGACCATCAAACAA  50

seq1  CCCCTTTCCTTCCCATAAAGCAGCATAGACTTTGCTGAAGAGCCATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTCCTTCCCATAAAGCAGCATAGACTTTGCTGAAGAGCCATCAAA  100

seq1  TGCAGCTTCCTTTTCCAGAGTCTGCCATGCCCAGCCTTGTGTTTTGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTCCTTTTCCAGAGTCTGCCATGCCCAGCCTTGTGTTTTGTGTA  150

seq1  GGGATGAGTTTCTAGACTCATGAGACAGTTTTATTATTTCTACAATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGTTTCTAGACTCATGAGACAGTTTTATTATTTCTACAATGAAT  200

seq1  ATTAAAATTTCGCACTATTAACATAAATTAGATAATGCATGTGGAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTCGCACTATTAACATAAATTAGATAATGCATGTGGAACACT  250

seq1  TAACCAAAATACAAAATACCAGGCATATACTAAATTCAGGTTAGGGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAATACAAAATACCAGGCATATACTAAATTCAGGTTAGGGTAAA  300

seq1  AGAGTCCCGTAGAATTCACAAGAATCAGAAATCTACTCATTTGCACACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCGTAGAATTCACAAGAATCAGAAATCTACTCATTTGCACACTC  350

seq1  AGAAATGCCATAAAATGCTAAACTTGAAGCTATAATGTATACACAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCCATAAAATGCTAAACTTGAAGCTATAATGTATACACAAAGGA  400

seq1  TATATACATATATAATATATATGCTAATAAATATATTAAAGAAGACCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATATATAATATATATGCTAATAAATATATTAAAGAAGACCATT  450

seq1  CATATTACATTATGAGACAAGGAACCTCCAAAGATGCTGTTGACTTTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTACATTATGAGACAAGGAACCTCCAAAGATGCTGTTGACTTTACT  500

seq1  CCCTTTGACCAGCTACTGCTGGGAATGCAGCTTCTCTTTAGAGTAGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGACCAGCTACTGCTGGGAATGCAGCTTCTCTTTAGAGTAGTTTG  550

seq1  AGTCAGACAGTCATGACACATGACTGTATTAACAGCACTTCGAAGGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGACAGTCATGACACATGACTGTATTAACAGCACTTCGAAGGCAGA  600

seq1  GACAGGCAGATTTCTGAATTTGAGGCCAGCCTGGTCTACAGAGTGAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCAGATTTCTGAATTTGAGGCCAGCCTGGTCTACAGAGTGAGTTC  650

seq1  CATGAAAGCCAGGGCTACACAGAGAAACCCTATCTTGAAAAGGCAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGCCAGGGCTACACAGAGAAACCCTATCTTGAAAAGGCAAATAA  700

seq1  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAGATAGATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAGATAGATAAAG  750

seq1  A  751
      |
seq2  A  751


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