BAC Information

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BAC

Clone NameB6Ng01-231E13
Chromosome3 (Build37)
Map Location 66,767,699 - 66,768,576
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625048, Veph1, Tpi-rs2, Ptx3, LOC625115
Downstream geneShox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231E13.bB6Ng01-231E13.g
ACCGA043925GA043926
length878802
definitionB6Ng01-231E13.b B6Ng01-231E13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattcatataattatgtctccctcctcggatttaggtatatatt
tttattgtttcatttagctttttaattatctttggtgaacattgaactaa
aggctttggacacacaaagcatgcattataccactgagatgtagttccta
gcctctctccttagatttaaaggaaagtttaatatatgattttacacaca
cacacacacacacacacacacatgtcttctgtgaatcaagtaaatgctgc
ccagatcattccatggattgttccctattaaagtacgcttgcatctgggg
atatttagatgctgtacaactggacatacaggagtctctaaaatgtatcc
ttcttgattgactccttctctcaactctttctgcatttgcaacttgccct
gcctccccatccccacctcaggtcaaccagaccttctgtttacttagact
cccaaggatgccagactttcaggggaggtcaggaaaggggagtctggcag
attggagcagaaaggtgaaaaggcccttaaggcagtgatacctgtgtggt
tgtgcacagtcagactcctggaatgagtacctcaaaagaaaggacagagg
gttgtctgtgtggtgtgtgacgtgggaagcttctcaagatgaaagcatga
gaactagtcataaagtggccaggcaaggaaaaatacctcactgttctcct
aagcacggaagacctggcaagggcgaaccatgtgggatggtgtttggttg
acttttctccttttttattagctctcatttcaagctgttgaaaagtgtag
cccttgcgcccactgaactactgtttttctcactggggcacctggtttgg
tgggatgagaagaatggggggtgggagg
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattaatcct
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgacgaaaggatggaccatctagtgactgccatatgca
gggatccatcccataatcagcttccaaatgctgacaccattgcatacact
agcaagattttgctgaaaggacccagttatagctctctcttgtgagacta
tgccggggcctagcaaacacagaagtggatgatcacagtcagctattgga
tgggtcacatggcccctaatggaggagctagagaaattacccaaggagct
aaagggaactgcaaccctataggtggaacaacaatatgaactaaccagta
cctgggagctcttgtctttagctgcatacgtatcaaaagatggcctagtc
ggccatcactgcaaagagaggcccattggacttgcaaactttatatgccc
cagtacaggggaacgccagggccaaaaatggggagtgggtgggtagggga
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66767699_66768576
seq2: B6Ng01-231E13.b_48_925

seq1  GAATTCCATTCATATAATTATGTCTCCCTCCTCGGATTTAGGTATATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCATATAATTATGTCTCCCTCCTCGGATTTAGGTATATATT  50

seq1  TTTATTGTTTCATTTAGCTTTTTAATTATCTTTGGTGAACATTGAACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTTCATTTAGCTTTTTAATTATCTTTGGTGAACATTGAACTAA  100

seq1  AGGCTTTGGACACACAAAGCATGCATTATACCACTGAGATGTAGTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGGACACACAAAGCATGCATTATACCACTGAGATGTAGTTCCTA  150

seq1  GCCTCTCTCCTTAGATTTAAAGGAAAGTTTAATATATGATTTTACACACA  200
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  GCCTCTCTCCTTAGATTTAAAGGAAAGTTTAATATATGATTTT--ACACA  198

seq1  CACACACACACACACACACACACATGTCTTCTGTGAATCAAGTAAATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACATGTCTTCTGTGAATCAAGTAAATGCT  248

seq1  GCCCAGATCATTCCATGGATTGTTCCCTATTAAAGTACGCTTGCATCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGATCATTCCATGGATTGTTCCCTATTAAAGTACGCTTGCATCTGG  298

seq1  GGATATTTAGATGCTGTACAACTGGACATACAGGAGTCTCTAAAATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTTAGATGCTGTACAACTGGACATACAGGAGTCTCTAAAATGTAT  348

seq1  CCTTCTTGATTGACTCCTTCTCTCAACTCTTTCTGCATTTGCAACTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGATTGACTCCTTCTCTCAACTCTTTCTGCATTTGCAACTTGCC  398

seq1  CTGCCTCCCCATCCCCACCTCAGGTCAACCAGACCTTCTGTTTACTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCCATCCCCACCTCAGGTCAACCAGACCTTCTGTTTACTTAGA  448

seq1  CTCCCAAGGATGCCAGACTTTCAGGGGAGGTCAGGAAAGGGGAGTCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGGATGCCAGACTTTCAGGGGAGGTCAGGAAAGGGGAGTCTGGC  498

seq1  AGATTGGAGCAGAAAGGTGAAAAGGCCCTTAAGGCAGTGATACCTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGAGCAGAAAGGTGAAAAGGCCCTTAAGGCAGTGATACCTGTGTG  548

seq1  GTTGTGCACAGTCAGACTCCTGGAATGAGTACCTCAAAAGAAAGGACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCACAGTCAGACTCCTGGAATGAGTACCTCAAAAGAAAGGACAGA  598

seq1  GGGTTGTCTGTGTGGTGTGTGACGTGGGAAGCTTCTCAAGATGAAAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTCTGTGTGGTGTGTGACGTGGGAAGCTTCTCAAGATGAAAGCAT  648

seq1  GAGAACTAGTCATAAAGTGGCCAGGCAAGGAAAAATACCTCACTGTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTAGTCATAAAGTGGCCAGGCAAGGAAAAATACCTCACTGTTCTC  698

seq1  CTAAGCACGGAAGACCTGGCAAGGGCGAACCATGTGGGATGGTGTTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCACGGAAGACCTGGCAAGGGCGAACCATGTGGGATGGTGTTTGGT  748

seq1  TGACTTTTCTCCTTTTTTATTAGCTCTCATTTCAAGCTGTTGAAAAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTCTCCTTTTTTATTAGCTCTCATTTCAAGCTGTTGAAAAGTGT  798

seq1  AGCCCTTGCGCCCACTGAACTACTGTTTTTCTCACT-GGGCACCTGGTTT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGCCCTTGCGCCCACTGAACTACTGTTTTTCTCACTGGGGCACCTGGTTT  848

seq1  GGTGGGATGAGAAGAAT-GGGGGTGGGAGG  878
      ||||||||||||||||| ||||||||||||
seq2  GGTGGGATGAGAAGAATGGGGGGTGGGAGG  878