BAC Information

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BAC

Clone NameB6Ng01-241C23
Chromosome3 (Build37)
Map Location 155,640,271 - 155,640,831
singlet/doubletsinglet
Overlap genenone
Upstream geneTnni3k, Fpgt, Lrrc44, EG383956, Scp2-ps1, EG668902
Downstream geneLOC624519, LOC100040901, 4930570G19Rik, Negr1, LOC100041152, LOC668853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241C23.bB6Ng01-241C23.g
ACCGA051165GA051166
length1,121561
definitionB6Ng01-241C23.b B6Ng01-241C23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaaactcaaatggtcaagaagcacctaaagacatg
ttcagcatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagaggaacaatccctccattgct
ggtgggattgcaatctggtacaaccactctagaaatcaatctgatggttc
ctcagaaaattggacttagtattctttgaggacctagctataccactcct
tggcatatgcacaaaagatgctccaacataaaacaaggacacgtgcttga
ttatgttcatagaagccttatttatagtagccagaagctggagagatcac
agatgtccttcaacagaggaatggatacaaaaattgtggtacatttacac
aatggagtactactcagttattaaaaacaatgaattaattaaaaacttag
gcaaatggaactagaaaatactgtcctgagtgaggtaacccaatcacaaa
agaacacacatggtatacattcactgataagtggataatagcacaaaagc
ttgaaataccaaagatatagttcacagaccacatgaagctcaagaagaag
gaagaccaatgtgtgggtgtttcggttcttcttagaaggtatatcaaaat
actcatgggagcaaatacagagacaaagtgtgggacagactgaaggaaag
gccatctaaagactgccttacctgaggatccatcccgtatacagtcacca
aacacagacactactgtgggtgctaataagtgcatgctgacaggaggctg
atatagctctctcctatgagactctaccagagcctgacatatacagagtc
agatgttcgcagccagccattgaactgagcacagggtccccaatggagag
ttaaaggactgaaggaactgaagttgtttgcaaccccataggaaaacata
tatcaaacaaccagatttctcaggtctaaaccaccaatcaaggagtacca
tggagggacccatgactacagccatatattgtagaatagatgccttctgg
gcatcagtggtagaggaggccctttgggtcctgtgaaggcttgattgtga
ggtgtgggaagtggggtttgg
tcacctgaggaatacagaagaactgagaagcacctgaaaaaatgttcaac
atccttaatcatcagggaaatgaaaatcaaaagaaccctgagattccacc
tcacaccagtcagaatggctaagataaaaaattcaggtgacagcagatgc
aggagaggatgtggagaaagaggaacactcctccattgttggtgggattg
caagcttgtacaaccactctggaaatctgtctggtggttcctcagaaaat
tggacatagtactaccagaagatccagcaatacctctcctgggcatatat
ccagaagatgctccaacttgtaacaaacacacatgctcaactatgttcat
agcagccttatttataatagccagaagctggaaagaacacagatgtctat
caacagaggaatggatacagaaaatgtggtgcatttacacaatggagtac
tactcagctattaaaaacaatgaatttatgatatttttctgtttattctt
aaagagagaaaaaagatagagttgggtgggtaagagaggtgaagatgatg
tgggggaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_155640271_155640831
seq2: B6Ng01-241C23.g_72_632 (reverse)

seq1  ATCTTCCCCCACATCATCTTCACCTCTCTTACCCACCCAACTCTATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCCCCACATCATCTTCACCTCTCTTACCCACCCAACTCTATCTTT  50

seq1  TTTCTCTCTTTAAGAATAAACAGAAAAATATCATAAATTCATTGTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTTTAAGAATAAACAGAAAAATATCATAAATTCATTGTTTTTA  100

seq1  ATAGCTGAGTAGTACTCCATTGTGTAAATGCACCACATTTTCTGTATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGAGTAGTACTCCATTGTGTAAATGCACCACATTTTCTGTATCCA  150

seq1  TTCCTCTGTTGATAGACATCTGTGTTCTTTCCAGCTTCTGGCTATTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTTGATAGACATCTGTGTTCTTTCCAGCTTCTGGCTATTATAA  200

seq1  ATAAGGCTGCTATGAACATAGTTGAGCATGTGTGTTTGTTACAAGTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTGCTATGAACATAGTTGAGCATGTGTGTTTGTTACAAGTTGGA  250

seq1  GCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCTTCTGGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCTTCTGGTAG  300

seq1  TACTATGTCCAATTTTCTGAGGAACCACCAGACAGATTTCCAGAGTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTCCAATTTTCTGAGGAACCACCAGACAGATTTCCAGAGTGGTT  350

seq1  GTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCA  400

seq1  CATCCTCTCCTGCATCTGCTGTCACCTGAATTTTTTATCTTAGCCATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTCCTGCATCTGCTGTCACCTGAATTTTTTATCTTAGCCATTCT  450

seq1  GACTGGTGTGAGGTGGAATCTCAGGGTTCTTTTGATTTTCATTTCCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTGTGAGGTGGAATCTCAGGGTTCTTTTGATTTTCATTTCCCTGA  500

seq1  TGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCAGTTCTTCTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCAGTTCTTCTGTAT  550

seq1  TCCTCAGGTGA  561
      |||||||||||
seq2  TCCTCAGGTGA  561