BAC Information

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BAC

Clone NameB6Ng01-250A09
Chromosome3 (Build37)
Map Location 13,781,436 - 13,782,536
singlet/doubletsinglet
Overlap gene0710005M24Rik
Upstream geneEG668033, LOC668037, LOC100039823, LOC100039861, LOC100041679, LOC100041667, LOC100039882
Downstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250A09.bB6Ng01-250A09.g
ACCGA057685GA057686
length1,0931,197
definitionB6Ng01-250A09.b B6Ng01-250A09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactcaaaaaagctaaaaagctggatatcaatgtccagcaggct
actcaacagctgaagcactgtcctgtgataagattatttttaattcgata
ctatctaaccaattctccatgaattgtagaaacgtttatttagccaagtc
tcattgtcagtctacaactgaattattcctatgatgaaagtgttccacag
atcaactgaaagtcaggcattgcagacatgatgatggttgtttcgtctat
ttgtgaatattcattttaccaattccatatatctatttgcacacagaatg
gttttttttttctagtgaacacatatagcatgaattttttatgtaattct
ggtttggacaaacagaataaagatataatttacatgcttttctaatccac
atgagatatttttcatttgcttcttttttattagatattttctttattta
cattccaaattttatcccctttccccatttcccctccaaaacttcctatc
ccatccctcttccccctgctcaccaacccagccactccagctcctcaccc
tggcattcccccacactgcagcattgagccttcacaagaccaagggcctc
tcctctcattgatgttccacaaggccatcctcttctacatatgcggctgg
agccatgggtccctccctgtatactctttggttgatggtttagtccctgg
aagctctgggggtactggttggttcatattgttgttcctcctatgggtct
gcaaaacccttcagcttcctggggagctagagagatattattattattat
tattattattattattattattattattattattaattattttaaatgca
ttaaattttgccttaaaaatcacaggacatggattaactgtggctattgg
agctcaacttcactttaatctggattttgcaagtagtcacagtctgatat
gattagctactatgtctggaattttatctctatctcagattcttaaatcc
atttgagaatataataaaaggtaccctatttagtcagtggttcatgttat
tttgtcaaattgagaaacttcatgatacaacatcctctgacag
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
tccaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgcacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggggaatcctgtaataccactcctgggc
atatatccagaagatgtcccaaccgataagaagaacacatgttccactat
gttcatagcagccttatttatactagcaagaagctggaaagaacccagat
gctcctcaacagagaaatggatacagaaattgtggtacatttacacaatg
gagtattactcagctgtggggagccgccctcacattcgccgttgcaagat
ggcgctgacatcctgtgttctaagtggtaaacaaataatctgcacatgtg
ccaagcgtagttctccactccatgtgctctgccttccccgtgacgacaac
tcggccgatgggctgcagccaatcagggagtgacacgtcctagacggagg
ataattctccttaaaagggaccgggttttgccattctctctcttgctctt
gctcttgctctcttgctcctgaagatgtaagcaataaagcttttgccgca
gaagattccggtttgttgcgtctttcctggccggtcacgaacgcgtgtaa
gagttggtgccggaacccgggacgagaaaacccgggaggagaaaactcgg
gagttaccatcacaccagcgcaaggaagatccctcattcccggaaccaga
actgcgggtcagtcataaaggttcccgtaaaacagactgttgagaaggat
cagtgtggattcagaactcttcagctgggggaacaggggtacccgtaagt
atagcttacagtaagtctgtcttgaactttctaatgaaatcaagaacagt
ctatcagaggtaaagtgggaaagagcttacagtatgttgcttgacctttc
tccaaggttaggagcttttgtccttccaatgttatccatgtaaggcagct
gaaatctggaatgaattccaggcaatcttatccgatagttaaaaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13781436_13782536
seq2: B6Ng01-250A09.b_47_1139

seq1  GAATTCCACTCAAAAAAGCTAAAAAGCTGGATATCAATGTCCAGCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCAAAAAAGCTAAAAAGCTGGATATCAATGTCCAGCAGGCT  50

seq1  ACTCAACAGCTGAAGCACTGTCCTGTGATAAGATTATTTTTAATTCGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACAGCTGAAGCACTGTCCTGTGATAAGATTATTTTTAATTCGATA  100

seq1  CTATCTAACCAATTCTCCATGAATTGTAGAAACGTTTATTTAGCCAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTAACCAATTCTCCATGAATTGTAGAAACGTTTATTTAGCCAAGTC  150

seq1  TCATTGTCAGTCTACAACTGAATTATTCCTATGATGAAAGTGTTCCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCAGTCTACAACTGAATTATTCCTATGATGAAAGTGTTCCACAG  200

seq1  ATCAACTGAAAGTCAGGCATTGCAGACATGATGATGGTTGTTTCGTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTGAAAGTCAGGCATTGCAGACATGATGATGGTTGTTTCGTCTAT  250

seq1  TTGTGAATATTCATTTTACCAATTCCATATATCTATTTGCACACAGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATATTCATTTTACCAATTCCATATATCTATTTGCACACAGAATG  300

seq1  GTTTTTTTTTTCTAGTGAACACATATAGCATGAATTTTTTATGTAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTCTAGTGAACACATATAGCATGAATTTTTTATGTAATTCT  350

seq1  GGTTTGGACAAACAGAATAAAGATATAATTTACATGCTTTTCTAATCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGACAAACAGAATAAAGATATAATTTACATGCTTTTCTAATCCAC  400

seq1  ATGAGATATTTTTCATTTGCTTCTTTTTTATTAGATATTTTCTTTATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATATTTTTCATTTGCTTCTTTTTTATTAGATATTTTCTTTATTTA  450

seq1  CATTCCAAATTTTATCCCCTTTCCCCATTTCCCCTCCAAAACTTCCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAATTTTATCCCCTTTCCCCATTTCCCCTCCAAAACTTCCTATC  500

seq1  CCATCCCTCTTCCCCCTGCTCACCAACCCAGCCACTCCAGCTCCTCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTCTTCCCCCTGCTCACCAACCCAGCCACTCCAGCTCCTCACCC  550

seq1  TGGCATTCCCCCACACTGCAGCATTGAGCCTTCACAAGACCAAGGGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCCCCCACACTGCAGCATTGAGCCTTCACAAGACCAAGGGCCTC  600

seq1  TCCTCTCATTGATGTTCCACAAGGCCATCCTCTTCTACATATGCGGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCATTGATGTTCCACAAGGCCATCCTCTTCTACATATGCGGCTGG  650

seq1  AGCCATGGGTCCCTCCCTGTATACTCTTTGGTTGATGGTTTAGTCCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGGTCCCTCCCTGTATACTCTTTGGTTGATGGTTTAGTCCCTGG  700

seq1  AAGCTCTGGGGGTACTGGTTGGTTCATATTGTTGTTCCTCCTATGGGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGGGGGTACTGGTTGGTTCATATTGTTGTTCCTCCTATGGGTCT  750

seq1  GCAAAACCCTTCAGCTTCCTGGGGAGCTAGAGAGATATTATTATTATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACCCTTCAGCTTCCTGGGGAGCTAGAGAGATATTATTATTATTAT  800

seq1  TATTATTATTATTATTATTATTATTATTATTATTAATTATTTTAAATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATTATTATTATTAATTATTTTAAATGCA  850

seq1  TTAAATTTTGCCTTAAAAATCACAGGACATGGATTAACTGTGGCTATTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTGCCTTAAAAATCACAGGACATGGATTAACTGTGGCTATTGG  900

seq1  AGCTCAAACTTCACTTTAATCTGGATTTTGCAAGTAGGTCACAGTCTGAT  950
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  AGCTC-AACTTCACTTTAATCTGGATTTTGCAAGTA-GTCACAGTCTGAT  948

seq1  ATTGATTAGCTACTATGTCTGGAATTTTATCTCTTATCTCAGATTCTTAA  1000
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  A-TGATTAGCTACTATGTCTGGAATTTTATCTC-TATCTCAGATTCTTAA  996

seq1  ATCCAATTTGAGAATATATAAAAAGGTACCCTAATTTAGTTCAGTGGTCC  1050
      |||| |||||||||||||  |||||||||||| |||||| |||||||| |
seq2  ATCC-ATTTGAGAATATAATAAAAGGTACCCT-ATTTAG-TCAGTGGTTC  1043

seq1  ATG-TATTTTGTCAAAATGAGAAACTTCATGGAATACAACATCCTCTGAC  1099
      ||| |||||||||||| ||||||||||||||  |||||||||||||||||
seq2  ATGTTATTTTGTCAAATTGAGAAACTTCATG--ATACAACATCCTCTGAC  1091

seq1  AG  1101
      ||
seq2  AG  1093