BAC Information

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BAC

Clone NameB6Ng01-251G11
Chromosome3 (Build37)
Map Location 90,116,543 - 90,117,621
singlet/doubletsinglet
Overlap genenone
Upstream geneEfna3, Efna4, Adam15, Dcst1, Dcst2, Zbtb7b, Lenep, Flad1, Cks1b, Shc1, Pygo2, Pbxip1, Pmvk, Kcnn3, LOC668078, Adar, Chrnb2, Ube2q1, LOC668087, She, Il6ra, Atp8b2, LOC668102, Hax1, Ubap2l, 4933434E20Rik, 1700094D03Rik, Tpm3, Nup210l, Rps27, Rab13, Jtb, Creb3l4, LOC100042397, Slc39a1, Crtc2, Dennd4b
Downstream geneGatad2b, Slc27a3, Ints3, Npr1, LOC668141, Ilf2, Snapap, 2500003M10Rik, S100a1, S100a13, S100a14, S100a16, EG628324, S100a3, S100a4, S100a5, S100a6, S100a7a, S100a8, S100a9, LOC668165, LOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251G11.bB6Ng01-251G11.g
ACCGA058673GA058674
length1,0801,192
definitionB6Ng01-251G11.b B6Ng01-251G11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagaccaggcaagctttttactcacagagatcctctta
agtgctgtgattaaaggtatgcaccacaaatcttgttaaaacactctctg
aggtacaatgtatatatggaaaaaaagttatctgcatagagattcagaat
attacctcttcctagaaatctgtttcttgaaaaaaatttacatttattca
ttcatgtgttaggcatgcatatggcttgttatgcttgtggaggttagagg
acaactcacaggaatggattttctccttctgggattgaatttggatcatt
aggcttggcagcaagtgcccttttctgtttagctgtctcactgacctctg
aaatctttttatgtttcctctattgtcattctatctccagaagagaacac
ccccacccctatccccaccccagacagggtttctctgtgtagctctggct
gttctgaaactcactctgtagaccaggttggcctcgaactcagaaatcct
cctgcctctgcctcccaagtgctaggattaaaggtgtgtgccaccactgc
ctggtgggaaccactttttgctatggtgtgtaaatactctgtgctaacta
tttatacgtgtggagtgcttcctctgggtagtattcatgttcatttgcaa
ggttgagactgttgtacaaaatatccacagatttctttagagcagaataa
tgtctgtttaatagaatgattctcatctgggaacagtttaccctccagtg
gatatttggtattgtatggggaaagggacctttttttttcttgcagatag
aattggtgttgctattattcatattttgtttctagaggccagaggtactg
ctaaacaatcaacagtacctaggacagctttcttcttcttctaatttttt
ttaagattatttatacagtgttgtgcctgcatataccaccttcaggtcag
aagagggcaccagatctcactataaatggttatgatccacccaccatact
gggaactgaacctcagtacctcatgaagagcagctgctgcacctaacctt
tgagccaatgtctccaggcccttaaggcag
gaattcaggggagcttgtggaaacaatgcagtagagttgagagggagagt
ggagcaccagagacagagaaggaggtagtgttacagagacacattgaaaa
gagaacaagctagacacaggtaaagacagaataagcaagagaatgagagg
agcctgaagattagaaaggattgctagagttagtttgaggccaagcagag
caattcagaggctgagagaaaagccaggttaaataaaccagctgggagag
gagtttgagctgagttgaaccagtcagtcagagttcagaaagaactaggc
ctgggtgagcttattcagcagtaagtttcagaggccgaaaacattctagg
cttagattagactgtacagagtctaggagctcccaggactaggcctaggt
tagcagacagaggcagtaagcctcagagacagttactacttgtgaataaa
atctacttttgcatttctcactaactggcacagtgtcttacagaaggaaa
tggctcagtgtgtaaaagtctttgccctataagcatatcacccatgtttg
aactgcaaaacacacagaaaatgctggatacagtggcctaacacaccatc
tcagcaatcctacagtgacatagaaagaggaaacagtagaattggctgga
aactcacaggccagctggcttggcacatacagtgccagcagcagaaacaa
gagagacctggcctcaaagcaaggtcgaagagaactgactctcaaaaagt
catcctctgagatccacacatgtgctgtccaatgtgagcatccccccccc
cacgcacacacacacatacatatactctaaactgtaaataaaaatgttag
cccactctgtcagcacagaccaaataaaaatgctagccagctcttgtttg
tttgtttgtttgtttttcgatacagtagccctggctgtcctggaaactca
ctctgtagaccaggctagcctcgaactcagaaaatccgcctgccctctgc
ctcccaagtgctgggattaaaagaatgtgccaccaacccacgtgtaagcc
agctctgaacaagcatgggtcatctttgctagaacacagaagttcacaag
tcagcttggtattacagctagaaaggaagagccagagaacgataagaaag
gaaaaactgtaaagaaaagaccttggcaaagaaagccttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_90116543_90117621
seq2: B6Ng01-251G11.b_45_1124

seq1  GAATTCACTATGTAGACCAGGCAAGCTTTTTACTCACAGAGATCCTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACCAGGCAAGCTTTTTACTCACAGAGATCCTCTTA  50

seq1  AGTGCTGTGATTAAAGGTATGCACCACAAATCTTGTTAAAACACTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTGATTAAAGGTATGCACCACAAATCTTGTTAAAACACTCTCTG  100

seq1  AGGTACAATGTATATATGGAAAAAAAGTTATCTGCATAGAGATTCAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAATGTATATATGGAAAAAAAGTTATCTGCATAGAGATTCAGAAT  150

seq1  ATTACCTCTTCCTAGAAATCTGTTTCTTGAAAAAAATTTACATTTATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTCTTCCTAGAAATCTGTTTCTTGAAAAAAATTTACATTTATTCA  200

seq1  TTCATGTGTTAGGCATGCATATGGCTTGTTATGCTTGTGGAGGTTAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGTTAGGCATGCATATGGCTTGTTATGCTTGTGGAGGTTAGAGG  250

seq1  ACAACTCACAGGAATGGATTTTCTCCTTCTGGGATTGAATTTGGATCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCACAGGAATGGATTTTCTCCTTCTGGGATTGAATTTGGATCATT  300

seq1  AGGCTTGGCAGCAAGTGCCCTTTTCTGTTTAGCTGTCTCACTGACCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGCAGCAAGTGCCCTTTTCTGTTTAGCTGTCTCACTGACCTCTG  350

seq1  AAATCTTTTTATGTTTCCTCTATTGTCATTCTATCTCCAGAAGAGAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTTATGTTTCCTCTATTGTCATTCTATCTCCAGAAGAGAACAC  400

seq1  CCCCACCCCTATCCCCACCCCAGACAGGGTTTCTCTGTGTAGCTCTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCTATCCCCACCCCAGACAGGGTTTCTCTGTGTAGCTCTGGCT  450

seq1  GTTCTGAAACTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAACTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCT  500

seq1  CCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGTGTGTGCCACCACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGTGTGTGCCACCACTGC  550

seq1  CTGGTGGGAACCACTTTTTGCTATGGTGTGTAAATACTCTGTGCTAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGGAACCACTTTTTGCTATGGTGTGTAAATACTCTGTGCTAACTA  600

seq1  TTTATACGTGTGGAGTGCTTCCTCTGGGTAGTATTCATGTTCATTTGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACGTGTGGAGTGCTTCCTCTGGGTAGTATTCATGTTCATTTGCAA  650

seq1  GGTTGAGACTGTTGTACAAAATATCCACAGATTTCTTTAGAGCAGAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGACTGTTGTACAAAATATCCACAGATTTCTTTAGAGCAGAATAA  700

seq1  TGTCTGTTTAATAGAATGATTCTCATCTGGGAACAGTTTACCCTCCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTAATAGAATGATTCTCATCTGGGAACAGTTTACCCTCCAGTG  750

seq1  GATATTTGGTATTGTATGGGGAAAGGGACCTTTTTTTTTCTTGCAGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGGTATTGTATGGGGAAAGGGACCTTTTTTTTTCTTGCAGATAG  800

seq1  AATTGGTGTTGCTATTATTCATATTTTGTTTCTAGAGGCCAGAGGTACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTGTTGCTATTATTCATATTTTGTTTCTAGAGGCCAGAGGTACTG  850

seq1  CTAAACAATCAACAGTACCTAGGACAGCTTTCTTCTTCTTCTAATTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAATCAACAGTACCTAGGACAGCTTTCTTCTTCTTCTAATTTTTT  900

seq1  TTTAAAGATTATTTATACAGTGTTGTGCCTGCATATA-CACCTTCAGGTC  949
      ||  ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TT--AAGATTATTTATACAGTGTTGTGCCTGCATATACCACCTTCAGGTC  948

seq1  AGAAGAGGGCACCAGATCTCACTATAAATGGTTATGATCCACCCACCATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGCACCAGATCTCACTATAAATGGTTATGATCCACCCACCATA  998

seq1  CTGGGAACTGAA-CTCAGTACCTCATGAAGAGCAGCTGCTGCACTTAACC  1048
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  CTGGGAACTGAACCTCAGTACCTCATGAAGAGCAGCTGCTGCACCTAACC  1048

seq1  TTTGAGCC-ATGTCTCCAGCCCCTTAGGGCAG  1079
      |||||||| |||||||||| |||||| |||||
seq2  TTTGAGCCAATGTCTCCAGGCCCTTAAGGCAG  1080