BAC Information

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BAC

Clone NameB6Ng01-251O19
Chromosome3 (Build37)
Map Location 13,450,483 - 13,451,684
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039798, EG668033, LOC668037, LOC100039823
Downstream geneLOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229, LOC668062
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251O19.bB6Ng01-251O19.g
ACCGA059059GA059060
length1,180959
definitionB6Ng01-251O19.b B6Ng01-251O19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggctacaactgcaccattttttttttaagttggattatttg
ttttcttgatgtccactatttttagcacttcatatattttgtgtattaac
cctttattatatgtggagttggagacaaaagtttaccctttctgtaggct
gttactttgtctaaatgataatgagtttgttgattgtttgattgactttt
gccatacagaaacatttcagtttcatgaggtcccgcctttcaatccattt
tacagatatgtgtttatacatacaaaataatgtttccccttgtgcattat
gtgtaacctcaaacaaattatagttacaaatttaggcaaaaccacaaaaa
tttcttatttttcatttatatttcatgattaatactttacaccaatatga
gcatatgacctttaaaactgtaccaatgtaatttacactgtatatttgcc
tgcactcttttgtaacttttcttcagcatctaatacaagttatatggaaa
atataatatgtgattatcattaatcttttataataaatgtagatatttta
ttttatttttagtgaaaatttacttcataaaatagctgcaattttgtttt
tattgtatatgcaaatactatgagaaaatacatttatttcatatgaagca
attattataaataaaaaattaaaactataaagttcttatgaaaagagaaa
agcttgagaaaatggggcctaaaagcaataaacagaaaggaccaataaat
tattaaccaaaattaaaatattttcttcaaaagatattaggaagcagtga
tataaaaagtgatcaaatcgtaatatacatatttaaattttgattttact
gaggctgaaaagatggctcagcagttaagagcactgatgttattaacaag
atattaagttcaattctcagcaaccatatgccatgtcccaactatttatt
ttatttttattttgtatttttgttaaactataaactttatttaaaatata
taactcagtattacatttttaagtctcaaaataatttatatataaatgcc
tctcaatgtcatgaatatctttctgagctaaaggtatatgcactcaacag
tttaaatatatttgaactagccatgataaagtgaggatctgttatgacgc
ttctatgcaaggaaatgtgagaagttcctg

gaattcctgatctttccaagacttttgtcatgaatgggtgttggatcttg
tgaaatgctttctcagcatctaacgagatgatcatgtggtttttgtcttt
gggattgtttatataatggattatgttgatggattttcatatacataacc
atccctgcatccctggaatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagagagaattttgttgagtatttttgc
atcaatattcataagagaaattagtctgaagttctctatgtttgttgggt
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgcttctattttgtggaatactttgtgaataactgg
aattagattttctttgaaggtctgatagaactctgcagtaaacccatatg
gtcctgggcttctttttttgttgtagtttttttgtttgtttgtttgggag
actattaattactgcttctattcctttaggggatataggactctttagat
cattaacctgatcctgatttaactttgatacctggtatctgtctagaaat
ttgtccatttcgtcaaggttttccaggtttgttgagtatagccttttgta
gaaggatctgatggtgttttggatttcttcaggatctgtttttatgtctc
ccttttcatttctgattttgtttaattaggatgtttgtctcttgtgtgct
tttcgggggtctgactaaatggtttatctatctttgttgattttctcaaa
gaaccatctcctccttttggttgaattctttgaatagttcttgttccact
tggttgtattagcccctgagttgaattatttttctcgccatctactcctc
ttgggtgaaatttgcttcctttttgttctagagcttttaagtgtgatgtc
aacctgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13450483_13451684
seq2: B6Ng01-251O19.b_48_1227

seq1  GAATTCTCTGGCTACAACTGCACCATTTTTTTTTTAAGTTGGATTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCTACAACTGCACCATTTTTTTTTTAAGTTGGATTATTTG  50

seq1  TTTTCTTGATGTCCACTATTTTTAGCACTTCATATATTTTGTGTATTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGATGTCCACTATTTTTAGCACTTCATATATTTTGTGTATTAAC  100

seq1  CCTTTATTATATGTGGAGTTGGAGACAAAAGTTTACCCTTTCTGTAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTATATGTGGAGTTGGAGACAAAAGTTTACCCTTTCTGTAGGCT  150

seq1  GTTACTTTGTCTAAATGATAATGAGTTTGTTGATTGTTTGATTGACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTGTCTAAATGATAATGAGTTTGTTGATTGTTTGATTGACTTTT  200

seq1  GCCATACAGAAACATTTCAGTTTCATGAGGTCCCGCCTTTCAATCCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAGAAACATTTCAGTTTCATGAGGTCCCGCCTTTCAATCCATTT  250

seq1  TACAGATATGTGTTTATACATACAAAATAATGTTTCCCCTTGTGCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATATGTGTTTATACATACAAAATAATGTTTCCCCTTGTGCATTAT  300

seq1  GTGTAACCTCAAACAAATTATAGTTACAAATTTAGGCAAAACCACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACCTCAAACAAATTATAGTTACAAATTTAGGCAAAACCACAAAAA  350

seq1  TTTCTTATTTTTCATTTATATTTCATGATTAATACTTTACACCAATATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTTTTCATTTATATTTCATGATTAATACTTTACACCAATATGA  400

seq1  GCATATGACCTTTAAAACTGTACCAATGTAATTTACACTGTATATTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGACCTTTAAAACTGTACCAATGTAATTTACACTGTATATTTGCC  450

seq1  TGCACTCTTTTGTAACTTTTCTTCAGCATCTAATACAAGTTATATGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCTTTTGTAACTTTTCTTCAGCATCTAATACAAGTTATATGGAAA  500

seq1  ATATAATATGTGATTATCATTAATCTTTTATAATAAATGTAGATATTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATGTGATTATCATTAATCTTTTATAATAAATGTAGATATTTTA  550

seq1  TTTTATTTTTAGTGAAAATTTACTTCATAAAATAGCTGCAATTTTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTAGTGAAAATTTACTTCATAAAATAGCTGCAATTTTGTTTT  600

seq1  TATTGTATATGCAAATACTATGAGAAAATACATTTATTTCATATGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATATGCAAATACTATGAGAAAATACATTTATTTCATATGAAGCA  650

seq1  ATTATTATAAATAAAAAATTAAAACTATAAAGTTCTTATGAAAAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATAAATAAAAAATTAAAACTATAAAGTTCTTATGAAAAGAGAAA  700

seq1  AGCTTGAGAAAATGGGGCCTAAAAGCAATAAACAGAAAGGACCAATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGAAAATGGGGCCTAAAAGCAATAAACAGAAAGGACCAATAAAT  750

seq1  TATTAACCAAAATTAAAATATTTTCTTCAAAAGATATTAGGAAGCAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACCAAAATTAAAATATTTTCTTCAAAAGATATTAGGAAGCAGTGA  800

seq1  TATAAAAAGTGATCAAATCGTAATATACATATTTAAATTTTGATTTTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAGTGATCAAATCGTAATATACATATTTAAATTTTGATTTTACT  850

seq1  GAGGCTGAAAAGATGGCTCAGCAGTTAAGAGCACTGATGTTATTAACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAAAAGATGGCTCAGCAGTTAAGAGCACTGATGTTATTAACAAG  900

seq1  ATATTAAGTTCAATTCTCAGCAACCATATGCCATGTCCCAACTATTTATT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATATTAAGTTCAATTCTCAGCAACCATATGCCATGTCCCAACTATTTA-T  949

seq1  TTTATTTTTATTTTGTATTTTTGTTAAACTAATAAACTTTATTTTAAAAT  1000
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TTTATTTTTATTTTGTATTTTTGTTAAACT-ATAAACTTTA-TTTAAAAT  997

seq1  ATATAACTCAGTATTACATTTTTAAGTCCTCAAAATAATTTATAATAATT  1050
      ||||||||||||||||||||||||||| ||||||||||||||| |||  |
seq2  ATATAACTCAGTATTACATTTTTAAGT-CTCAAAATAATTTAT-ATA--T  1043

seq1  AAATGCCTCTCAAATGTCATG-ATATC-TTCTGAAGCTAAAAGTAATATG  1098
      ||||||||||| ||||||||| ||||| ||||| ||||||| || |||||
seq2  AAATGCCTCTC-AATGTCATGAATATCTTTCTG-AGCTAAAGGT-ATATG  1090

seq1  CACTCAACCAGTTTTTAAAATATATTTGGAACATTAAGCATGATAAAAGT  1148
      ||||||| ||||||   |||||||||| ||||  ||  |||||| |||||
seq2  CACTCAA-CAGTTT---AAATATATTT-GAAC--TAGCCATGAT-AAAGT  1132

seq1  AGAAAAGAATCTGTTATGACGTTCTCTATGAAAGGAAATTGTGAAAAGTT  1198
           || ||||||||||||| | |||||| ||||||| ||||| |||||
seq2  ----GAGGATCTGTTATGACGCT-TCTATGCAAGGAAA-TGTGAGAAGTT  1176

seq1  CCTG  1202
      ||||
seq2  CCTG  1180


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