BAC Information

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BAC

Clone NameB6Ng01-253L06
Chromosome3 (Build37)
Map Location 6,113,327 - 6,114,450
singlet/doubletsinglet
Overlap genenone
Upstream geneZfhx4, Pxmp3, EG620382, EG667759, LOC100041165
Downstream geneLOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253L06.bB6Ng01-253L06.g
ACCGA060364GA060365
length1,1871,119
definitionB6Ng01-253L06.b B6Ng01-253L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttaggtggagctatttttgatcccagtttttaacat
tgaattttatcccagttgattcctgacagtcttccgtgtttgcattcctc
tgctttgtgtaagaatccagttacctatttgtaccttgccagtgtgtcac
ccaactgccctattttcttctgtataagaagtttgaggctcaatttgaca
aattacattcagattctgcactatctcctgtgtcgcttctgtttgtcatt
ctctgactccttgtccacctgcaaccagagacccattccacacagatagg
agacccaataaggggatagtctgcagcaatagtgtctgggtttggtggct
gattatgggatggactccagggtggggcagtctctggatggtccatcctt
tcatcttagctacaaactttgtctctgcaactccttccatggatatttta
ttccctattctagagaggaatgaagtatccacctgttgatcttccttcct
tattttcttgttttggaagttgtatcttagtattctaggtttctgggcta
atatccacttatcagtgagtacatatttaagtgacttcttttgttattgg
gttacctcactaaaggatgctatcctccagatacatccatttgccaaaga
atttcataaattcattgtttttaatagctgagtagtattccattgtgtaa
aggtaccacagtttctgtatccagtcttttgttgaggacatctctgttct
ttcagcttctggcttttaaaaatagggctgctattgaacatagtgagcat
gggttcccttatagccagtggaacatccttcctggttattattgccaggg
gagctatggcctgaaccttagcatggaatatctatgtcagttctgatgac
cccagaacctgattttcacagaggggttggttatccc
gaattcacttgatgctggtccctgttttgtttaaatcttttgccccaaag
ctactcaattcccaaaacttacagtagacaaatacacattgacttagaac
aagaggaaaagtttcaaccaacaaggggaaatgtctcttgcgcaacttga
attatcatctttactatttttgggtatgtactaaaacattcatttttcaa
agtgctaattaaatttccacaaatgcagtgagcctttaaccacattataa
ggagaaatattatatgataaagtagtcgtgatttaagaaacaaggatcct
atttaggtatttctgtacaactttctaaaaacaataaaaattatttttct
ttcttattataggacctgaagtaataagtgaaatataatcctcattaatt
tccccccagctgtatataaatcaatagctgtagcatcccaaaggaaatgc
acactgcatggtcctgcaagttcctaatgaatgcaaatagaatgaccttt
ttctgacaactatgaatactgtttcacaattttaccattaaaatcgctgg
tgtcagcaattcattcagtaaataggtagcaaacaatagttgtaagtatt
cattacagtaaaagagactgaagaatgtcagctaaagttttacaactttt
aagcctgaggttttgctcatttcattttgatatggaagttcagtcacaaa
tctaaccaatctcctttctgcttcagtcttttctgttctagaagaaaatg
gattaaagtaattattctatagtaggtcatttaatcaaggacctgattta
gaagtattggcatgaataaagtagatcaacgagaagttttatgaagccct
aattacaatattgaacttaccaggaggctgtgactatatcccatctaaaa
tatttggtgtaagtaaatatatgggaaaaccatattttgaagtcacaatg
ccatctgcatgatgaacaagtagaaaaaattggaacatggaaatagacta
tgtatgttcatgctgtgggacccaagaaagaatatagattaaatcatatc
ttgtctattttgaatagagatcctttaatcttaagtagattaacttacag
gcaagtattgtactcaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6113327_6114450
seq2: B6Ng01-253L06.g_66_1184 (reverse)

seq1  ACTTGAGTACAATACTTGCTTGTAGGTTTATTCTACCTTAGAATTAAGGG  50
      ||||||||||||||||||| |||| | ||| |||| ||||  ||||| ||
seq2  ACTTGAGTACAATACTTGCCTGTAAG-TTAATCTA-CTTAAGATTAAAGG  48

seq1  ATCTCTTAATCAAAATAGACAAGATTATGATTTAATCTATATCTTTCCTT  100
      ||||| || ||||||||||||||| |||||||||||||||||  || |||
seq2  ATCTC-TATTCAAAATAGACAAGA-TATGATTTAATCTATATTCTTTCTT  96

seq1  GGGTTCCCACAAGCATGAACATTACATAGTCTATTTCCATGTTCCAA-TT  149
      ||| |||||| |||||||||| ||||||||||||||||||||||||| ||
seq2  GGG-TCCCAC-AGCATGAACA-TACATAGTCTATTTCCATGTTCCAATTT  143

seq1  TTTCTACTTGTTCATCATGCAGATGGCATTGTGACTTCAAAATATGGTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTTGTTCATCATGCAGATGGCATTGTGACTTCAAAATATGGTTT  193

seq1  T-CCATATATTTACTTACACCAAATATTTTAGATGGGATATAGTCACAGC  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATATATTTACTTACACCAAATATTTTAGATGGGATATAGTCACAGC  243

seq1  CTCCTGGTAAGTTCAATATTGTAATTAGGGCTTCATAAAACTTCTCGTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGTAAGTTCAATATTGTAATTAGGGCTTCATAAAACTTCTCGTTG  293

seq1  ATCTACTTTATTCATGCCAATACTTCTAAATCAGGTCCTTGATTAAATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTTATTCATGCCAATACTTCTAAATCAGGTCCTTGATTAAATGA  343

seq1  CCTACTATAGAATAATTACTTTAATCCATTTTCTTCTAGAACAGAAAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTATAGAATAATTACTTTAATCCATTTTCTTCTAGAACAGAAAAGA  393

seq1  CTGAAGCAGAAAGGAGATTGGTTAGATTTGTGACTGAACTTCCATATCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCAGAAAGGAGATTGGTTAGATTTGTGACTGAACTTCCATATCAA  443

seq1  AATGAAATGAGCAAAACCTCAGGCTTAAAAGTTGTAAAACTTTAGCTGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGAGCAAAACCTCAGGCTTAAAAGTTGTAAAACTTTAGCTGAC  493

seq1  ATTCTTCAGTCTCTTTTACTGTAATGAATACTTACAACTATTGTTTGCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCAGTCTCTTTTACTGTAATGAATACTTACAACTATTGTTTGCTA  543

seq1  CCTATTTACTGAATGAATTGCTGACACCAGCGATTTTAATGGTAAAATTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTACTGAATGAATTGCTGACACCAGCGATTTTAATGGTAAAATTG  593

seq1  TGAAACAGTATTCATAGTTGTCAGAAAAAGGTCATTCTATTTGCATTCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGTATTCATAGTTGTCAGAAAAAGGTCATTCTATTTGCATTCAT  643

seq1  TAGGAACTTGCAGGACCATGCAGTGTGCATTTCCTTTGGGATGCTACAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACTTGCAGGACCATGCAGTGTGCATTTCCTTTGGGATGCTACAGC  693

seq1  TATTGATTTATATACAGCTGGGGGGAAATTAATGAGGATTATATTTCACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATTTATATACAGCTGGGGGGAAATTAATGAGGATTATATTTCACT  743

seq1  TATTACTTCAGGTCCTATAATAAGAAAGAAAAATAATTTTTATTGTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTCAGGTCCTATAATAAGAAAGAAAAATAATTTTTATTGTTTTT  793

seq1  AGAAAGTTGTACAGAAATACCTAAATAGGATCCTTGTTTCTTAAATCACG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTTGTACAGAAATACCTAAATAGGATCCTTGTTTCTTAAATCACG  843

seq1  ACTACTTTATCATATAATATTTCTCCTTATAATGTGGTTAAAGGCTCACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTATCATATAATATTTCTCCTTATAATGTGGTTAAAGGCTCACT  893

seq1  GCATTTGTGGAAATTTAATTAGCACTTTGAAAAATGAATGTTTTAGTACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTGGAAATTTAATTAGCACTTTGAAAAATGAATGTTTTAGTACA  943

seq1  TACCCAAAAATAGTAAAGATGATAATTCAAGTTGCGCAAGAGACATTTCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAAAATAGTAAAGATGATAATTCAAGTTGCGCAAGAGACATTTCC  993

seq1  CCTTGTTGGTTGAAACTTTTCCTCTTGTTCTAAGTCAATGTGTATTTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTGGTTGAAACTTTTCCTCTTGTTCTAAGTCAATGTGTATTTGTC  1043

seq1  TACTGTAAGTTTTGGGAATTGAGTAGCTTTGGGGCAAAAGATTTAAACAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAAGTTTTGGGAATTGAGTAGCTTTGGGGCAAAAGATTTAAACAA  1093

seq1  AACAGGGACCAGCATCAAGTGAATTC  1124
      ||||||||||||||||||||||||||
seq2  AACAGGGACCAGCATCAAGTGAATTC  1119